BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017770
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    90   4e-16
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    87   2e-15
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    85   1e-14
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    83   5e-14
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    80   3e-13

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
 Frame = +3

Query: 81  YITRAVLSANPSSNPNYVVM-VKYGTKGLAFFKPGSETWSVLDLDDNYFSDVIYYNDQLY 257
           +I + VLS++P  + N+VV+ +   T  LA+ + G ++WS+++   ++  DVI+ N   Y
Sbjct: 164 FIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFY 223

Query: 258 AVTWNGQLFSCDV--NHPRPYLFHVAQSPSGSFESKFVYLLVSSGELLLIKKRLYVKCS- 428
           AV   GQ+  CD+  + PR       +   G  +    YL+ S  ELLL+ + L ++   
Sbjct: 224 AVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQ----YLVNSGDELLLVTRYLDLEYEF 279

Query: 429 ---------TYLTARIEILKLDLIGSKWVELKKFSGQAXXXXXXXXXXXXXXYFPGCKLN 581
                     Y T R E+ +LD  G +W+ +     +A               F GC  N
Sbjct: 280 DHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGN 339

Query: 582 CIYFTHEYLECAGSGDLTD 638
           CIY+T +YL+    G   D
Sbjct: 340 CIYYTDDYLDANYDGHFGD 358


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
 Frame = +3

Query: 21   QIQLPPLPLIHNEDEILG---------EFYITRAVLSANPSSNPNYVVMVKYGTKG-LAF 170
            QI LP L    N + ++          + +I +AVLS+ PSS P+  VM+ Y   G LAF
Sbjct: 1033 QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSS-PDCAVMIIYSDYGRLAF 1091

Query: 171  FKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLFSCDVNHPRPYLFHVAQSPS--- 341
             KPG +TW++L+ +     D+IY+N    AV  + +++ CD++  +      A +P+   
Sbjct: 1092 TKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQD 1151

Query: 342  -GSFESKFVYLLVSSGELLLIKKRLYVKCSTYL----TARIEILKLDLIGSKWVELKKFS 506
                E +  YL+ S GE+ ++ + LY      +    T    +LKLD+   +W E++   
Sbjct: 1152 VDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLD 1211

Query: 507  GQAXXXXXXXXXXXXXXYFPGCKLNCIYFTHEY 605
              +               +P  + N IYFT +Y
Sbjct: 1212 HCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDY 1244


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
 Frame = +3

Query: 81  YITRAVLSANPSSNPNYVVMVKYGTKG-LAFFKPGSETWSVLDLDDNYFSDVIYYNDQLY 257
           +I + +LS++P++  +++ +V     G LA  +   ++W+ L+   +Y  DVI++    Y
Sbjct: 161 FIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFY 220

Query: 258 AVTWNGQLFSCDV--NHPRPYLFHVAQSPSGSFESKFVYLLVSSGELLLIKKRLYVKCST 431
           AV   G +  CDV  + PR  +  + Q   G  +    YL+ S  ELLL+ + L +    
Sbjct: 221 AVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQ----YLVESGEELLLVTRYLDLTYDV 276

Query: 432 --------YLTARIEILKLDLIGSKWVELKKFSGQAXXXXXXXXXXXXXXYFPGCKLNCI 587
                   Y T R ++ +LDL   +W  +     +A               FPGCK NCI
Sbjct: 277 EPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCI 336

Query: 588 YFTHEYLE 611
           Y+T +Y E
Sbjct: 337 YYTDDYSE 344


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
 Frame = +3

Query: 81  YITRAVLSANPSSNPNYVVMVKYGTKG-LAFFKPGSETWSVLDLDDNYFSDVIYYNDQLY 257
           +I + +LS++P++  +++ +V     G LA  +   ++W+ L+   +Y  DVI++    Y
Sbjct: 161 FIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFY 220

Query: 258 AVTWNGQLFSCDV--NHPRPYLFHVAQSPSGSFESKFVYLLVSSGELLLIKKRLYVKCST 431
           AV   G +  CDV  + PR  +  + Q   G  +    YL+ S  ELLL+ + L +    
Sbjct: 221 AVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQ----YLVESGEELLLVTRYLDLTYDV 276

Query: 432 --------YLTARIEILKLDLIGSKWVELKKFSGQAXXXXXXXXXXXXXXYFPGCKLNCI 587
                   Y T R ++ +LD    +W  +     +A               FPGCK NCI
Sbjct: 277 EXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCI 336

Query: 588 YFTHEYLE 611
           Y+T +Y E
Sbjct: 337 YYTDDYSE 344


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
 Frame = +3

Query: 81  YITRAVLSANPSSNPN--YVVM-VKYGTKGLAFFKPGSETWSVLDLDDNYFSDVIYYNDQ 251
           +I + V+S++P       +V M +   T  LA+ K G E W++++   ++  DVIY+N  
Sbjct: 163 FIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGL 222

Query: 252 LYAVTWNGQLFSCDVNHPRPYLFHVAQSPSGSFESKFVYLLVSSGELLLIKKRLYVKCS- 428
            YAV   GQ+  CDVN   P +  + ++P         YL+ S   LLL+ + L +    
Sbjct: 223 FYAVNKAGQIVVCDVNGNSPKVSFI-ETPR-QIGGDMQYLVSSGDGLLLVTRYLDLDVEF 280

Query: 429 ---TYLTARIEILKLDLIGSKWVELKKFSGQAXXXXXXXXXXXXXXYFPGCKLNCIYFTH 599
               Y TAR E+ KLDL G +W  +                        GC  +CIY+T 
Sbjct: 281 DIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTD 340

Query: 600 EY 605
           +Y
Sbjct: 341 DY 342