BLASTX nr result

ID: Coptis21_contig00017762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017762
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD35445.1| putative yip1 interacting factor [Oryza sativa J...   159   5e-37
gb|EEC80990.1| hypothetical protein OsI_23725 [Oryza sativa Indi...   159   5e-37
gb|EAZ37663.1| hypothetical protein OsJ_21998 [Oryza sativa Japo...   159   5e-37
ref|NP_001058090.1| Os06g0620600 [Oryza sativa Japonica Group] g...   159   5e-37
ref|XP_003579735.1| PREDICTED: protein YIF1B-B-like [Brachypodiu...   157   2e-36

>dbj|BAD35445.1| putative yip1 interacting factor [Oryza sativa Japonica Group]
           gi|51090829|dbj|BAD35357.1| putative yip1 interacting
           factor [Oryza sativa Japonica Group]
          Length = 264

 Score =  159 bits (402), Expect = 5e-37
 Identities = 75/123 (60%), Positives = 96/123 (78%)
 Frame = +3

Query: 315 PEALNVQFTKGLLGWFLEVMLLKVTLHTLVSGDAPLLDMVAYGGYAFADVTLAMLAKILS 494
           PEAL +QFTKGLLGWFL+V+L++V L+TL SG+APLLD+VAY GY FA  +LAML ++  
Sbjct: 141 PEALTLQFTKGLLGWFLQVILIRVLLYTLGSGEAPLLDIVAYAGYGFAGTSLAMLVRVFW 200

Query: 495 NYSYHFVIALESFCMGMFLVKTMKRVLFTEMRSYEKHSSQRHYHLLFVAIIQIPIFIWLS 674
           + SY+FV+   S C G+FLVKTMKRVL    RSYE+H S+ HY LLF+A++Q P+  WL 
Sbjct: 201 SPSYYFVLPWFSICTGVFLVKTMKRVLLGAPRSYERHPSRNHYFLLFLAVVQFPMLFWLG 260

Query: 675 NIS 683
           NIS
Sbjct: 261 NIS 263


>gb|EEC80990.1| hypothetical protein OsI_23725 [Oryza sativa Indica Group]
          Length = 264

 Score =  159 bits (402), Expect = 5e-37
 Identities = 75/123 (60%), Positives = 96/123 (78%)
 Frame = +3

Query: 315 PEALNVQFTKGLLGWFLEVMLLKVTLHTLVSGDAPLLDMVAYGGYAFADVTLAMLAKILS 494
           PEAL +QFTKGLLGWFL+V+L++V L+TL SG+APLLD+VAY GY FA  +LAML ++  
Sbjct: 141 PEALTLQFTKGLLGWFLQVILIRVLLYTLGSGEAPLLDIVAYAGYGFAGTSLAMLVRVFW 200

Query: 495 NYSYHFVIALESFCMGMFLVKTMKRVLFTEMRSYEKHSSQRHYHLLFVAIIQIPIFIWLS 674
           + SY+FV+   S C G+FLVKTMKRVL    RSYE+H S+ HY LLF+A++Q P+  WL 
Sbjct: 201 SPSYYFVLPWFSICTGVFLVKTMKRVLLGAPRSYERHPSRNHYFLLFLAVVQFPMLFWLG 260

Query: 675 NIS 683
           NIS
Sbjct: 261 NIS 263


>gb|EAZ37663.1| hypothetical protein OsJ_21998 [Oryza sativa Japonica Group]
          Length = 372

 Score =  159 bits (402), Expect = 5e-37
 Identities = 75/123 (60%), Positives = 96/123 (78%)
 Frame = +3

Query: 315 PEALNVQFTKGLLGWFLEVMLLKVTLHTLVSGDAPLLDMVAYGGYAFADVTLAMLAKILS 494
           PEAL +QFTKGLLGWFL+V+L++V L+TL SG+APLLD+VAY GY FA  +LAML ++  
Sbjct: 249 PEALTLQFTKGLLGWFLQVILIRVLLYTLGSGEAPLLDIVAYAGYGFAGTSLAMLVRVFW 308

Query: 495 NYSYHFVIALESFCMGMFLVKTMKRVLFTEMRSYEKHSSQRHYHLLFVAIIQIPIFIWLS 674
           + SY+FV+   S C G+FLVKTMKRVL    RSYE+H S+ HY LLF+A++Q P+  WL 
Sbjct: 309 SPSYYFVLPWFSICTGVFLVKTMKRVLLGAPRSYERHPSRNHYFLLFLAVVQFPMLFWLG 368

Query: 675 NIS 683
           NIS
Sbjct: 369 NIS 371


>ref|NP_001058090.1| Os06g0620600 [Oryza sativa Japonica Group]
           gi|113596130|dbj|BAF20004.1| Os06g0620600 [Oryza sativa
           Japonica Group] gi|215765461|dbj|BAG87158.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 267

 Score =  159 bits (402), Expect = 5e-37
 Identities = 75/123 (60%), Positives = 96/123 (78%)
 Frame = +3

Query: 315 PEALNVQFTKGLLGWFLEVMLLKVTLHTLVSGDAPLLDMVAYGGYAFADVTLAMLAKILS 494
           PEAL +QFTKGLLGWFL+V+L++V L+TL SG+APLLD+VAY GY FA  +LAML ++  
Sbjct: 144 PEALTLQFTKGLLGWFLQVILIRVLLYTLGSGEAPLLDIVAYAGYGFAGTSLAMLVRVFW 203

Query: 495 NYSYHFVIALESFCMGMFLVKTMKRVLFTEMRSYEKHSSQRHYHLLFVAIIQIPIFIWLS 674
           + SY+FV+   S C G+FLVKTMKRVL    RSYE+H S+ HY LLF+A++Q P+  WL 
Sbjct: 204 SPSYYFVLPWFSICTGVFLVKTMKRVLLGAPRSYERHPSRNHYFLLFLAVVQFPMLFWLG 263

Query: 675 NIS 683
           NIS
Sbjct: 264 NIS 266


>ref|XP_003579735.1| PREDICTED: protein YIF1B-B-like [Brachypodium distachyon]
          Length = 269

 Score =  157 bits (397), Expect = 2e-36
 Identities = 71/124 (57%), Positives = 100/124 (80%)
 Frame = +3

Query: 315 PEALNVQFTKGLLGWFLEVMLLKVTLHTLVSGDAPLLDMVAYGGYAFADVTLAMLAKILS 494
           PEA+N+QFT+GL+GW L+++ LK  L+++  G+ PLLD+VAYGGY FA V+LA++A++L 
Sbjct: 146 PEAINLQFTRGLIGWGLQIVFLKGLLYSMGGGEVPLLDLVAYGGYLFAGVSLAIVARLLW 205

Query: 495 NYSYHFVIALESFCMGMFLVKTMKRVLFTEMRSYEKHSSQRHYHLLFVAIIQIPIFIWLS 674
            YSY+ ++   S CMG+FLV+TMKRVLFTEMR  E+HS+++HY LLF+AI Q P+F WL 
Sbjct: 206 AYSYYIMMPWMSLCMGVFLVRTMKRVLFTEMRGSERHSTRQHYFLLFMAIAQFPLFFWLG 265

Query: 675 NISA 686
           +I A
Sbjct: 266 SIGA 269


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