BLASTX nr result

ID: Coptis21_contig00017761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017761
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308734.1| predicted protein [Populus trichocarpa] gi|2...    78   3e-28
ref|XP_002525238.1| transcription factor, putative [Ricinus comm...    78   3e-28
dbj|BAE46413.1| MYB-CC type transfactor [Solanum tuberosum]            78   4e-28
ref|XP_002329947.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-28
ref|XP_002272588.2| PREDICTED: uncharacterized protein LOC100248...    78   8e-28

>ref|XP_002308734.1| predicted protein [Populus trichocarpa] gi|222854710|gb|EEE92257.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 78.2 bits (191), Expect(2) = 3e-28
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 119 WTHDLHERFVDAVAQLGGPDRATPKGVLRMMGVQGLT 229
           WTH+LHERFVDAVAQLGGPDRATPKGVLR+MGVQGLT
Sbjct: 54  WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLT 90



 Score = 72.0 bits (175), Expect(2) = 3e-28
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 292 GVQGLTIYHIKSHLQKYRLAKYLPDPTSDGKSSDNKET 405
           GVQGLTIYH+KSHLQKYRLAKYLPD +SDGK +D KET
Sbjct: 85  GVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKET 122


>ref|XP_002525238.1| transcription factor, putative [Ricinus communis]
           gi|223535535|gb|EEF37204.1| transcription factor,
           putative [Ricinus communis]
          Length = 336

 Score = 78.2 bits (191), Expect(2) = 3e-28
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 119 WTHDLHERFVDAVAQLGGPDRATPKGVLRMMGVQGLT 229
           WTH+LHERFVDAVAQLGGPDRATPKGVLR+MGVQGLT
Sbjct: 54  WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLT 90



 Score = 72.0 bits (175), Expect(2) = 3e-28
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 292 GVQGLTIYHIKSHLQKYRLAKYLPDPTSDGKSSDNKET 405
           GVQGLTIYH+KSHLQKYRLAKYLPD +SDGK +D KET
Sbjct: 85  GVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKET 122


>dbj|BAE46413.1| MYB-CC type transfactor [Solanum tuberosum]
          Length = 306

 Score = 78.2 bits (191), Expect(2) = 4e-28
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 119 WTHDLHERFVDAVAQLGGPDRATPKGVLRMMGVQGLT 229
           WTH+LHERFVDAVAQLGGPDRATPKGVLR+MGVQGLT
Sbjct: 24  WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLT 60



 Score = 71.6 bits (174), Expect(2) = 4e-28
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 292 GVQGLTIYHIKSHLQKYRLAKYLPDPTSDGKSSDNKET 405
           GVQGLTIYH+KSHLQKYRLAKYLPD +SDGK SD KE+
Sbjct: 55  GVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKQSDKKES 92


>ref|XP_002329947.1| predicted protein [Populus trichocarpa] gi|222871969|gb|EEF09100.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 78.2 bits (191), Expect(2) = 7e-28
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 119 WTHDLHERFVDAVAQLGGPDRATPKGVLRMMGVQGLT 229
           WTH+LHERFVDAVAQLGGPDRATPKGVLR+MGVQGLT
Sbjct: 33  WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLT 69



 Score = 70.9 bits (172), Expect(2) = 7e-28
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +1

Query: 292 GVQGLTIYHIKSHLQKYRLAKYLPDPTSDGKSSDNKET 405
           GVQGLTIYH+KSHLQKYRLAKYLPD +SDGK  D KET
Sbjct: 64  GVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKVDKKET 101


>ref|XP_002272588.2| PREDICTED: uncharacterized protein LOC100248144 [Vitis vinifera]
          Length = 336

 Score = 78.2 bits (191), Expect(2) = 8e-28
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 119 WTHDLHERFVDAVAQLGGPDRATPKGVLRMMGVQGLT 229
           WTH+LHERFVDAVAQLGGPDRATPKGVLR+MGVQGLT
Sbjct: 54  WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLT 90



 Score = 70.5 bits (171), Expect(2) = 8e-28
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = +1

Query: 292 GVQGLTIYHIKSHLQKYRLAKYLPDPTSDGKSSDNKET 405
           GVQGLTIYH+KSHLQKYRLAKYLPD +SDGK +D KE+
Sbjct: 85  GVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKES 122


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