BLASTX nr result

ID: Coptis21_contig00017760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017760
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...   365   1e-98
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   365   2e-98
emb|CBI35950.3| unnamed protein product [Vitis vinifera]              365   2e-98
emb|CAN63206.1| hypothetical protein VITISV_010618 [Vitis vinifera]   365   2e-98
ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   358   2e-96

>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis]
           gi|223533215|gb|EEF34971.1| Protein SEY1, putative
           [Ricinus communis]
          Length = 813

 Score =  365 bits (937), Expect = 1e-98
 Identities = 181/260 (69%), Positives = 212/260 (81%)
 Frame = +2

Query: 2   VLREDIQKIWNTIPKPQAHKETALSEFFNVEFTGLPSYEEKEELFKTQVANLRQRIFRCI 181
           VLREDIQKIW+ +PKPQ HKET LSEFFNVE   L SYEEKEE FK QVA+LRQR F  I
Sbjct: 184 VLREDIQKIWDAVPKPQEHKETPLSEFFNVEVVALSSYEEKEEQFKEQVASLRQRFFHSI 243

Query: 182 APGGVAGDRRGVVPASGFSFSAQHIWKIIKENKDLDLPAHKVMVATVRCEEIANERFADL 361
           APGG+AGDRRGVVPASGFSFSAQ +WK+IKENKDLDLPAHKVMVATVRCEEIANE++A+ 
Sbjct: 244 APGGLAGDRRGVVPASGFSFSAQQMWKVIKENKDLDLPAHKVMVATVRCEEIANEKYANF 303

Query: 362 AGSEDWRQLEEAVQTGAVSGFGKKLSSIFQTCLSEYDAEANYFDKGVRTTKRHLLEANVL 541
             +E+W Q+EEAVQ+G VSGFGKKLSS   T  SEYDAEA YFD+GVR+ KR  LE  +L
Sbjct: 304 TTNEEWHQIEEAVQSGPVSGFGKKLSSTLSTSFSEYDAEAIYFDEGVRSAKRKQLEEKLL 363

Query: 542 QLMQPAYHSMLAHLRSRTLDDFKEAFCKALNGGETFAVAAHDCSKYFMSVFDEGCTDVDM 721
           QL+QPA+ SML H+RS TLD FKEAF KAL  GE F+ AA+ C++Y+M+VFDEGCTD  +
Sbjct: 364 QLVQPAHQSMLGHIRSGTLDKFKEAFDKALAAGEGFSSAAYSCTQYYMTVFDEGCTDAII 423

Query: 722 KQANWNQAGVQTSLLLHDID 781
           +QA+W+ + V+   L  DID
Sbjct: 424 EQASWDTSKVRDK-LRRDID 442


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
            vinifera]
          Length = 871

 Score =  365 bits (936), Expect = 2e-98
 Identities = 184/260 (70%), Positives = 211/260 (81%)
 Frame = +2

Query: 2    VLREDIQKIWNTIPKPQAHKETALSEFFNVEFTGLPSYEEKEELFKTQVANLRQRIFRCI 181
            VLREDIQKIW+++PKPQAHKET LSEFFNV+ T L SYEEKEELFK QVA+L+QR  + I
Sbjct: 242  VLREDIQKIWDSVPKPQAHKETPLSEFFNVQVTALSSYEEKEELFKEQVASLKQRFHQSI 301

Query: 182  APGGVAGDRRGVVPASGFSFSAQHIWKIIKENKDLDLPAHKVMVATVRCEEIANERFADL 361
            APGG+AGDRR VVPASGFSFSAQ IWK+IKENKDLDLPAHKVMVATVRCEEIANE+FA  
Sbjct: 302  APGGLAGDRRAVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKFAYF 361

Query: 362  AGSEDWRQLEEAVQTGAVSGFGKKLSSIFQTCLSEYDAEANYFDKGVRTTKRHLLEANVL 541
            A +E+W Q+EE VQTG V GFGKKLS I  +CLS YDAEA YFD+GVR+ KR  LEA +L
Sbjct: 362  ASNEEWCQIEEDVQTGTVPGFGKKLSLIIGSCLSGYDAEAIYFDEGVRSAKREQLEAKLL 421

Query: 542  QLMQPAYHSMLAHLRSRTLDDFKEAFCKALNGGETFAVAAHDCSKYFMSVFDEGCTDVDM 721
            QL+QPAY  ML H+RS TLD FKEAF KAL+GGE FAVA H C+K  M+ FDE C D  +
Sbjct: 422  QLVQPAYQLMLGHIRSGTLDKFKEAFDKALSGGEGFAVATHGCTKAVMTQFDEECADAVI 481

Query: 722  KQANWNQAGVQTSLLLHDID 781
            +QANW+ + V+   L  DID
Sbjct: 482  EQANWDTSKVRDK-LRRDID 500


>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  365 bits (936), Expect = 2e-98
 Identities = 184/260 (70%), Positives = 211/260 (81%)
 Frame = +2

Query: 2    VLREDIQKIWNTIPKPQAHKETALSEFFNVEFTGLPSYEEKEELFKTQVANLRQRIFRCI 181
            VLREDIQKIW+++PKPQAHKET LSEFFNV+ T L SYEEKEELFK QVA+L+QR  + I
Sbjct: 400  VLREDIQKIWDSVPKPQAHKETPLSEFFNVQVTALSSYEEKEELFKEQVASLKQRFHQSI 459

Query: 182  APGGVAGDRRGVVPASGFSFSAQHIWKIIKENKDLDLPAHKVMVATVRCEEIANERFADL 361
            APGG+AGDRR VVPASGFSFSAQ IWK+IKENKDLDLPAHKVMVATVRCEEIANE+FA  
Sbjct: 460  APGGLAGDRRAVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKFAYF 519

Query: 362  AGSEDWRQLEEAVQTGAVSGFGKKLSSIFQTCLSEYDAEANYFDKGVRTTKRHLLEANVL 541
            A +E+W Q+EE VQTG V GFGKKLS I  +CLS YDAEA YFD+GVR+ KR  LEA +L
Sbjct: 520  ASNEEWCQIEEDVQTGTVPGFGKKLSLIIGSCLSGYDAEAIYFDEGVRSAKREQLEAKLL 579

Query: 542  QLMQPAYHSMLAHLRSRTLDDFKEAFCKALNGGETFAVAAHDCSKYFMSVFDEGCTDVDM 721
            QL+QPAY  ML H+RS TLD FKEAF KAL+GGE FAVA H C+K  M+ FDE C D  +
Sbjct: 580  QLVQPAYQLMLGHIRSGTLDKFKEAFDKALSGGEGFAVATHGCTKAVMTQFDEECADAVI 639

Query: 722  KQANWNQAGVQTSLLLHDID 781
            +QANW+ + V+   L  DID
Sbjct: 640  EQANWDTSKVRDK-LRRDID 658


>emb|CAN63206.1| hypothetical protein VITISV_010618 [Vitis vinifera]
          Length = 857

 Score =  365 bits (936), Expect = 2e-98
 Identities = 184/260 (70%), Positives = 211/260 (81%)
 Frame = +2

Query: 2    VLREDIQKIWNTIPKPQAHKETALSEFFNVEFTGLPSYEEKEELFKTQVANLRQRIFRCI 181
            VLREDIQKIW+++PKPQAHKET LSEFFNV+ T L SYEEKEELFK QVA+L+QR  + I
Sbjct: 263  VLREDIQKIWDSVPKPQAHKETPLSEFFNVQVTALSSYEEKEELFKEQVASLKQRFHQSI 322

Query: 182  APGGVAGDRRGVVPASGFSFSAQHIWKIIKENKDLDLPAHKVMVATVRCEEIANERFADL 361
            APGG+AGDRR VVPASGFSFSAQ IWK+IKENKDLDLPAHKVMVATVRCEEIANE+FA  
Sbjct: 323  APGGLAGDRRAVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKFAYF 382

Query: 362  AGSEDWRQLEEAVQTGAVSGFGKKLSSIFQTCLSEYDAEANYFDKGVRTTKRHLLEANVL 541
            A +E+W Q+EE VQTG V GFGKKLS I  +CLS YDAEA YFD+GVR+ KR  LEA +L
Sbjct: 383  ASNEEWCQIEEDVQTGTVPGFGKKLSLIIGSCLSGYDAEAIYFDEGVRSAKREQLEAKLL 442

Query: 542  QLMQPAYHSMLAHLRSRTLDDFKEAFCKALNGGETFAVAAHDCSKYFMSVFDEGCTDVDM 721
            QL+QPAY  ML H+RS TLD FKEAF KAL+GGE FAVA H C+K  M+ FDE C D  +
Sbjct: 443  QLVQPAYQLMLGHIRSGTLDKFKEAFDKALSGGEGFAVATHGCTKAVMTQFDEECADAVI 502

Query: 722  KQANWNQAGVQTSLLLHDID 781
            +QANW+ + V+   L  DID
Sbjct: 503  EQANWDTSKVRDK-LRRDID 521


>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  358 bits (918), Expect = 2e-96
 Identities = 176/260 (67%), Positives = 210/260 (80%)
 Frame = +2

Query: 2   VLREDIQKIWNTIPKPQAHKETALSEFFNVEFTGLPSYEEKEELFKTQVANLRQRIFRCI 181
           VLREDIQKIW+++PKPQAHKET LSEFFNVE   L SYEEKEE FK QVA+L++R    I
Sbjct: 184 VLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKEQVASLQKRFHHSI 243

Query: 182 APGGVAGDRRGVVPASGFSFSAQHIWKIIKENKDLDLPAHKVMVATVRCEEIANERFADL 361
           APGG+AGDRRGVVPASGFSFS++HIWK+IKENKDLDLPAHKVMVATVRCEEIANE++A  
Sbjct: 244 APGGLAGDRRGVVPASGFSFSSEHIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYASF 303

Query: 362 AGSEDWRQLEEAVQTGAVSGFGKKLSSIFQTCLSEYDAEANYFDKGVRTTKRHLLEANVL 541
             +EDW QLEEAVQ+G + GFGKKLSS+  TC SEYDAEA YFD+GVR++K+  L+  + 
Sbjct: 304 VANEDWCQLEEAVQSGPIPGFGKKLSSLLDTCFSEYDAEATYFDEGVRSSKQKQLQEKLF 363

Query: 542 QLMQPAYHSMLAHLRSRTLDDFKEAFCKALNGGETFAVAAHDCSKYFMSVFDEGCTDVDM 721
           QL+QPA+ S L H+RS TLD FKEAF KAL GGE F+VAA++C    +  FDE CTDV +
Sbjct: 364 QLVQPAFQSALGHIRSGTLDKFKEAFDKALKGGEGFSVAANNCIGSGLVQFDEACTDVVI 423

Query: 722 KQANWNQAGVQTSLLLHDID 781
           +Q NW+ + V+   LL DID
Sbjct: 424 EQTNWDTSKVREK-LLRDID 442


Top