BLASTX nr result

ID: Coptis21_contig00017753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017753
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513002.1| conserved hypothetical protein [Ricinus comm...   158   5e-37
ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002268617.1| PREDICTED: epimerase family protein slr1223 ...   156   2e-36
ref|XP_002880372.1| hypothetical protein ARALYDRAFT_900542 [Arab...   154   6e-36
gb|AFK47694.1| unknown [Lotus japonicus]                              154   7e-36

>ref|XP_002513002.1| conserved hypothetical protein [Ricinus communis]
           gi|223548013|gb|EEF49505.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 351

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/107 (75%), Positives = 89/107 (83%)
 Frame = -2

Query: 322 IKESRINVTSKVVNLINNSSNDLRPTVLVSATAVGYYGTSETQVFDEQSPSGNDYLAEVC 143
           IK+SRI VTSKVV+LIN+S   +RPTVLVSATAVGYYG+SET+VFDE SPSGNDYLA VC
Sbjct: 137 IKQSRIRVTSKVVDLINDSPEGVRPTVLVSATAVGYYGSSETRVFDESSPSGNDYLAGVC 196

Query: 142 REWEGSALKVNKDXXXXXXXXXXXXGKDGGALAKMIPLFMMFAGGPL 2
           REWEG+ALKVNKD            GK+GGALAKMIPLFMMFAGGPL
Sbjct: 197 REWEGTALKVNKDVRLALIRIGVVLGKNGGALAKMIPLFMMFAGGPL 243


>ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|222850164|gb|EEE87711.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/107 (74%), Positives = 88/107 (82%)
 Frame = -2

Query: 322 IKESRINVTSKVVNLINNSSNDLRPTVLVSATAVGYYGTSETQVFDEQSPSGNDYLAEVC 143
           IK+SRI VTSKVV+LIN S   +RP VLVSATAVGYYG+SETQVFDE+SPSGNDYLAEVC
Sbjct: 135 IKQSRIKVTSKVVDLINGSPEGVRPAVLVSATAVGYYGSSETQVFDERSPSGNDYLAEVC 194

Query: 142 REWEGSALKVNKDXXXXXXXXXXXXGKDGGALAKMIPLFMMFAGGPL 2
           REWE +ALKVNKD            GKDGGALAKMIPLFM+FAGGP+
Sbjct: 195 REWEATALKVNKDVRLALIRIGVVLGKDGGALAKMIPLFMLFAGGPM 241


>ref|XP_002268617.1| PREDICTED: epimerase family protein slr1223 [Vitis vinifera]
           gi|297744722|emb|CBI37984.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/107 (71%), Positives = 87/107 (81%)
 Frame = -2

Query: 322 IKESRINVTSKVVNLINNSSNDLRPTVLVSATAVGYYGTSETQVFDEQSPSGNDYLAEVC 143
           IKESR+ +TSKVV++INNS +++RPTVLVSA+A+GYYG SET VF EQSPSGNDYLAEVC
Sbjct: 140 IKESRVRITSKVVDIINNSQDEVRPTVLVSASAIGYYGASETLVFKEQSPSGNDYLAEVC 199

Query: 142 REWEGSALKVNKDXXXXXXXXXXXXGKDGGALAKMIPLFMMFAGGPL 2
           REWEG A KVNKD            GKDGGALAKMIPLF +FAGGPL
Sbjct: 200 REWEGKAFKVNKDVRLVLIRIGVVLGKDGGALAKMIPLFNLFAGGPL 246


>ref|XP_002880372.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp.
           lyrata] gi|297326211|gb|EFH56631.1| hypothetical protein
           ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata]
          Length = 350

 Score =  154 bits (390), Expect = 6e-36
 Identities = 79/107 (73%), Positives = 84/107 (78%)
 Frame = -2

Query: 322 IKESRINVTSKVVNLINNSSNDLRPTVLVSATAVGYYGTSETQVFDEQSPSGNDYLAEVC 143
           IK+SRI +TSKVV+LINNS  + RPTVLVSATAVGYYGTSET VFDE SPSG DYLAEVC
Sbjct: 135 IKDSRIRITSKVVDLINNSPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVC 194

Query: 142 REWEGSALKVNKDXXXXXXXXXXXXGKDGGALAKMIPLFMMFAGGPL 2
           REWEG+ALK NKD            GKDGGALA MIP F MFAGGPL
Sbjct: 195 REWEGTALKANKDVRVALIRIGVVLGKDGGALAMMIPFFQMFAGGPL 241


>gb|AFK47694.1| unknown [Lotus japonicus]
          Length = 349

 Score =  154 bits (389), Expect = 7e-36
 Identities = 78/107 (72%), Positives = 86/107 (80%)
 Frame = -2

Query: 322 IKESRINVTSKVVNLINNSSNDLRPTVLVSATAVGYYGTSETQVFDEQSPSGNDYLAEVC 143
           IK+SRI VTSKV  LIN++ +D+RP V VSATAVGYYGTSETQVFDEQSPSGNDYLAEVC
Sbjct: 134 IKQSRIRVTSKVAELINSAPDDIRPKVFVSATAVGYYGTSETQVFDEQSPSGNDYLAEVC 193

Query: 142 REWEGSALKVNKDXXXXXXXXXXXXGKDGGALAKMIPLFMMFAGGPL 2
           REWE +AL+VN D            GK+GGALAKMIPLF MFAGGPL
Sbjct: 194 REWESTALRVNGDVRVALIRIGVVLGKEGGALAKMIPLFKMFAGGPL 240


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