BLASTX nr result

ID: Coptis21_contig00017751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017751
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437439.1| hypothetical protein SORBIDRAFT_10g027080 [S...    60   2e-07
ref|XP_002513424.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_002437439.1| hypothetical protein SORBIDRAFT_10g027080 [Sorghum bicolor]
           gi|241915662|gb|EER88806.1| hypothetical protein
           SORBIDRAFT_10g027080 [Sorghum bicolor]
          Length = 438

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/62 (43%), Positives = 47/62 (75%)
 Frame = -2

Query: 202 IRSISAFLACISSDTLQHSLVKDSIADIVLALIGITKTRNEALLGMTAEVTVTFVDVLGN 23
           ++S+ AF+ C+S++ L+ S++K+SI+DI++AL GI KT+N ++L   A+V+  FV  LGN
Sbjct: 72  LKSVGAFVGCLSNELLKLSVIKESISDILVALEGILKTKNVSVLIQAADVSSKFVSTLGN 131

Query: 22  YI 17
            +
Sbjct: 132 SV 133


>ref|XP_002513424.1| conserved hypothetical protein [Ricinus communis]
           gi|223547332|gb|EEF48827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1016

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/60 (46%), Positives = 43/60 (71%)
 Frame = -2

Query: 202 IRSISAFLACISSDTLQHSLVKDSIADIVLALIGITKTRNEALLGMTAEVTVTFVDVLGN 23
           +RSI++FL CIS D + H LVKDSI DIV AL+ I + +++A+L +TA +    +++L N
Sbjct: 58  VRSIASFLDCISGDNVHHPLVKDSIMDIVGALVWILQNKSKAVLTITANLVEKLINILPN 117


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