BLASTX nr result

ID: Coptis21_contig00017743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017743
         (1911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518153.1| PREDICTED: apurinic endonuclease-redox prote...   561   e-157
ref|XP_002274714.2| PREDICTED: apurinic endonuclease-redox prote...   559   e-157
emb|CBI30064.3| unnamed protein product [Vitis vinifera]              559   e-157
ref|XP_003537267.1| PREDICTED: LOW QUALITY PROTEIN: apurinic end...   546   e-153
ref|XP_002322649.1| predicted protein [Populus trichocarpa] gi|2...   531   e-148

>ref|XP_003518153.1| PREDICTED: apurinic endonuclease-redox protein-like [Glycine max]
          Length = 507

 Score =  561 bits (1445), Expect = e-157
 Identities = 297/482 (61%), Positives = 347/482 (71%), Gaps = 20/482 (4%)
 Frame = +2

Query: 236  SSNSNKKRVFKEEEGFETSSKVLKIETCGQDLQAMTVQQLRTMSKNFGISGRGSKHDLVS 415
            +S  +KK V +E +    S ++ ++      +  MTV +LR   K F +  +G K DL+S
Sbjct: 31   ASPGSKKLVVEENDVNSYSIEIQRLRNDPTIVDTMTVHELRKTLKRFKVPAKGRKDDLLS 90

Query: 416  ALKCFLDNEKDVNEDTQSKRKTKNLTSGEKAQ-----KTEL----------AAEVSSFQQ 550
            ALK F+DN     +D+  + K   L S E A      KT L            E+S   Q
Sbjct: 91   ALKSFMDNNM-CEQDSHLQEKQGLLISSENASVEVKAKTVLDEDHIENVNETPEISELNQ 149

Query: 551  KKRRGKLPIDDGDSLVVKSESVIMKERVSLKKTKVSDKKPSPTKGK---GVTQIEIDDGE 721
             KRR  L   + +   +K   V  K++VSLK  + SD KPS  K K       I +   E
Sbjct: 150  GKRR--LNQSESERKTIK---VTTKKKVSLKSDEDSDFKPSRAKKKVSSDFASIVVQSEE 204

Query: 722  FTDGVGLLKNSEEPWTKLAHKKPQEGWIPYNPRTMRPPPLDDCTNFVKLISWNVNGLRAL 901
             +          EPWT LAHKKPQ+GWI YNPRTMRPP L   T FVKL+SWNVNGLRAL
Sbjct: 205  ISTAT----IQTEPWTVLAHKKPQKGWIAYNPRTMRPPSLAQDTKFVKLLSWNVNGLRAL 260

Query: 902  LKLDTLSAFAL--RENFDILCLQETKLQEKDVEKIKERLIDGYENSFWTCSVSKLGYSGT 1075
            LKL+  SA  L  RE+FD+LCLQETKLQEKD+E+IK+RLIDGY NSFWTCSVSKLGYSGT
Sbjct: 261  LKLEGFSALQLAQREDFDVLCLQETKLQEKDIEEIKQRLIDGYANSFWTCSVSKLGYSGT 320

Query: 1076 AIISRIKPLSVKYGLGILDHDSEGRLVTLEFDTFYLISGYVPNSGDGLRRLTYRVTQWDP 1255
            AIISRIKPLSV+YGLGI DHDSEGRLVT EFDTFYLI GYVPNSGDGL+RL+YRVT+WDP
Sbjct: 321  AIISRIKPLSVRYGLGIPDHDSEGRLVTAEFDTFYLICGYVPNSGDGLKRLSYRVTEWDP 380

Query: 1256 SLSNYMKELEKSKPVILSGDLNCAHQEIDIFNPLGNKRSAGFTIEERESFEMNFLSKGFV 1435
            SLSNY+KELEKSKPVIL+GDLNCAH+EIDI+NP GNKRSAGFT EER+SF  NFLS+GFV
Sbjct: 381  SLSNYLKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSAGFTDEERKSFAKNFLSRGFV 440

Query: 1436 DTFRRQHPGVVGYTYWGFRHGGRVDNKGWRLDYFLISESIADLVHDSYIMPHITGSDHCP 1615
            DTFRRQHPGV+GYTYWG+RHGGR  N+GWRLDYFL+SESIAD VHDSYI+P +TGSDHCP
Sbjct: 441  DTFRRQHPGVIGYTYWGYRHGGRKFNRGWRLDYFLVSESIADKVHDSYILPDVTGSDHCP 500

Query: 1616 IG 1621
            IG
Sbjct: 501  IG 502


>ref|XP_002274714.2| PREDICTED: apurinic endonuclease-redox protein-like [Vitis vinifera]
          Length = 479

 Score =  559 bits (1441), Expect = e-157
 Identities = 289/478 (60%), Positives = 350/478 (73%), Gaps = 15/478 (3%)
 Frame = +2

Query: 233  LSSNSNKKRVFKEEEGFETSSKVLKIETCGQD---LQAMTVQQLRTMSKNFGISGRGSKH 403
            +SS  N K+   EE    T S  ++I++   D   ++AMTVQ+L T  ++ G+  +G K 
Sbjct: 1    MSSRPNTKKGVIEENASRTQS--IEIQSIRDDPAKVKAMTVQELTTTLRSVGVPAKGCKR 58

Query: 404  DLVSALKCFLDN---------EKDVNEDTQSKRKTKNLTSGEKAQKTELAAEVSSFQQKK 556
            DLV ALK FLDN         E+ +  +  SKRK KNL+  +  Q   + ++ S  +Q K
Sbjct: 59   DLVLALKSFLDNKASDESSQAEEQLELNILSKRKAKNLSVEDHEQNVNIVSDASGLKQSK 118

Query: 557  RRGKL-PIDDGDSLVVKSESVIMKERVSLKKTKVSDKKPSPTKGKGVTQIEIDDGEFTDG 733
            RR K  P++    + V +E +  KE+ S+K  + S  K    + K  ++  I     T+ 
Sbjct: 119  RRAKQSPVEA--KIEVNTEIINEKEKPSIKNKEASGNKLYQGERKASSRSSIKQIAVTER 176

Query: 734  VGLLKNSEEPWTKLAHKKPQEGWIPYNPRTMRPPPLDDCTNFVKLISWNVNGLRALLKLD 913
            + +  N  EPWT L HKKPQEGWIPYNPRTMRPPPL     FVKL+SWNVNGLR LLK  
Sbjct: 177  IDISMNEPEPWTVLTHKKPQEGWIPYNPRTMRPPPLTGDAKFVKLMSWNVNGLRGLLKSK 236

Query: 914  TLSAFAL--RENFDILCLQETKLQEKDVEKIKERLIDGYENSFWTCSVSKLGYSGTAIIS 1087
              SA  L  RE+FD+L LQETKLQEKDVE IK+ +I+GYENSFWTCSVSKLGYSGTAIIS
Sbjct: 237  GFSALKLAQREDFDVLSLQETKLQEKDVEAIKQSVIEGYENSFWTCSVSKLGYSGTAIIS 296

Query: 1088 RIKPLSVKYGLGILDHDSEGRLVTLEFDTFYLISGYVPNSGDGLRRLTYRVTQWDPSLSN 1267
            RIKPLSV+YGLGI DHDSEGRL+T EF++FYL+SGYVPNSGDGL+RL+YRVTQWD +L +
Sbjct: 297  RIKPLSVRYGLGISDHDSEGRLLTAEFESFYLLSGYVPNSGDGLKRLSYRVTQWDSALGS 356

Query: 1268 YMKELEKSKPVILSGDLNCAHQEIDIFNPLGNKRSAGFTIEERESFEMNFLSKGFVDTFR 1447
            YMKELEKSKPVIL+GDLNCAHQEIDI +P GN+RSAGFT EER+S E NFLSKGFVD+FR
Sbjct: 357  YMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFR 416

Query: 1448 RQHPGVVGYTYWGFRHGGRVDNKGWRLDYFLISESIADLVHDSYIMPHITGSDHCPIG 1621
            +QHPGVVGYTYWG+R+G R  NKGWRLDYFL+SESIAD VHDSYI+P I GSDHCPIG
Sbjct: 417  KQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVHDSYILPDIGGSDHCPIG 474


>emb|CBI30064.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  559 bits (1441), Expect = e-157
 Identities = 289/478 (60%), Positives = 350/478 (73%), Gaps = 15/478 (3%)
 Frame = +2

Query: 233  LSSNSNKKRVFKEEEGFETSSKVLKIETCGQD---LQAMTVQQLRTMSKNFGISGRGSKH 403
            +SS  N K+   EE    T S  ++I++   D   ++AMTVQ+L T  ++ G+  +G K 
Sbjct: 64   MSSRPNTKKGVIEENASRTQS--IEIQSIRDDPAKVKAMTVQELTTTLRSVGVPAKGCKR 121

Query: 404  DLVSALKCFLDN---------EKDVNEDTQSKRKTKNLTSGEKAQKTELAAEVSSFQQKK 556
            DLV ALK FLDN         E+ +  +  SKRK KNL+  +  Q   + ++ S  +Q K
Sbjct: 122  DLVLALKSFLDNKASDESSQAEEQLELNILSKRKAKNLSVEDHEQNVNIVSDASGLKQSK 181

Query: 557  RRGKL-PIDDGDSLVVKSESVIMKERVSLKKTKVSDKKPSPTKGKGVTQIEIDDGEFTDG 733
            RR K  P++    + V +E +  KE+ S+K  + S  K    + K  ++  I     T+ 
Sbjct: 182  RRAKQSPVEA--KIEVNTEIINEKEKPSIKNKEASGNKLYQGERKASSRSSIKQIAVTER 239

Query: 734  VGLLKNSEEPWTKLAHKKPQEGWIPYNPRTMRPPPLDDCTNFVKLISWNVNGLRALLKLD 913
            + +  N  EPWT L HKKPQEGWIPYNPRTMRPPPL     FVKL+SWNVNGLR LLK  
Sbjct: 240  IDISMNEPEPWTVLTHKKPQEGWIPYNPRTMRPPPLTGDAKFVKLMSWNVNGLRGLLKSK 299

Query: 914  TLSAFAL--RENFDILCLQETKLQEKDVEKIKERLIDGYENSFWTCSVSKLGYSGTAIIS 1087
              SA  L  RE+FD+L LQETKLQEKDVE IK+ +I+GYENSFWTCSVSKLGYSGTAIIS
Sbjct: 300  GFSALKLAQREDFDVLSLQETKLQEKDVEAIKQSVIEGYENSFWTCSVSKLGYSGTAIIS 359

Query: 1088 RIKPLSVKYGLGILDHDSEGRLVTLEFDTFYLISGYVPNSGDGLRRLTYRVTQWDPSLSN 1267
            RIKPLSV+YGLGI DHDSEGRL+T EF++FYL+SGYVPNSGDGL+RL+YRVTQWD +L +
Sbjct: 360  RIKPLSVRYGLGISDHDSEGRLLTAEFESFYLLSGYVPNSGDGLKRLSYRVTQWDSALGS 419

Query: 1268 YMKELEKSKPVILSGDLNCAHQEIDIFNPLGNKRSAGFTIEERESFEMNFLSKGFVDTFR 1447
            YMKELEKSKPVIL+GDLNCAHQEIDI +P GN+RSAGFT EER+S E NFLSKGFVD+FR
Sbjct: 420  YMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFR 479

Query: 1448 RQHPGVVGYTYWGFRHGGRVDNKGWRLDYFLISESIADLVHDSYIMPHITGSDHCPIG 1621
            +QHPGVVGYTYWG+R+G R  NKGWRLDYFL+SESIAD VHDSYI+P I GSDHCPIG
Sbjct: 480  KQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVHDSYILPDIGGSDHCPIG 537


>ref|XP_003537267.1| PREDICTED: LOW QUALITY PROTEIN: apurinic endonuclease-redox
            protein-like [Glycine max]
          Length = 543

 Score =  546 bits (1406), Expect = e-153
 Identities = 291/498 (58%), Positives = 348/498 (69%), Gaps = 19/498 (3%)
 Frame = +2

Query: 185  RNLRLKERIIMGSERFLSSNSNKKRVFKEEEGFETSSKVLKIETCGQDLQAMTVQQLRTM 364
            +N++LK     G E  L S   KK V +E +    S ++ ++      +  +TVQ+LR  
Sbjct: 58   KNVKLK-----GLEASLGS---KKLVVEENDVNSYSIELERLRNDPTIVDTVTVQELRKT 109

Query: 365  SKNFGISGRGSKHDLVSALKCFL-DNEKDVNEDTQSKR-------------KTKNLTSGE 502
             K F +  +G K D++SA K F+  N  +++   Q K+             + K +   +
Sbjct: 110  LKRFNVPAKGRKDDILSAWKSFVGSNMCELDSHAQEKKWPWISSENASVEVEAKKVLDED 169

Query: 503  KAQKTELAAEVSSFQQKKRRGKLPIDDGDSLVVKSESVIMKERVSLKKTKVSDKKPSPTK 682
              +      E+S   Q KRR K    +      K+  V  K++VSLK  + SD KPS  K
Sbjct: 170  HIENVNENPEISELNQAKRRLKQSESER-----KTIKVTTKKKVSLKSDEDSDFKPSRAK 224

Query: 683  GK---GVTQIEIDDGEFTDGVGLLKNSEEPWTKLAHKKPQEGWIPYNPRTMRPPPLDDCT 853
             K    V  I +   E +          EPWT LAHKKPQ+GWI YNPRTMRPPPL   T
Sbjct: 225  RKVSSDVASIVVQSEEISTAT----IQTEPWTVLAHKKPQKGWIAYNPRTMRPPPLAQDT 280

Query: 854  NFVKLISWNVNGLRALLKLDTLSAFAL--RENFDILCLQETKLQEKDVEKIKERLIDGYE 1027
             FVKL+SWN NGLRALLKL+  SA  L  RE+FD+LCLQ TKLQEKD+E+IK  LIDGY+
Sbjct: 281  KFVKLLSWNANGLRALLKLEGFSALQLAQREDFDVLCLQXTKLQEKDIEEIKHHLIDGYD 340

Query: 1028 NSFWTCSVSKLGYSGTAIISRIKPLSVKYGLGILDHDSEGRLVTLEFDTFYLISGYVPNS 1207
            NSFWT SVSKLGYSGTAIISRIKPLSV+YGLGI DHDSEGRLVT EFDTFYLI GYVPNS
Sbjct: 341  NSFWTFSVSKLGYSGTAIISRIKPLSVRYGLGISDHDSEGRLVTAEFDTFYLICGYVPNS 400

Query: 1208 GDGLRRLTYRVTQWDPSLSNYMKELEKSKPVILSGDLNCAHQEIDIFNPLGNKRSAGFTI 1387
            GDGL+RL+YRVT+WDPSLSNY+KELEKSKPVIL+GDLNCAH+EIDI+NP GNKRSAG T 
Sbjct: 401  GDGLKRLSYRVTEWDPSLSNYLKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSAGLTD 460

Query: 1388 EERESFEMNFLSKGFVDTFRRQHPGVVGYTYWGFRHGGRVDNKGWRLDYFLISESIADLV 1567
            EER+SF  NFLS+GFVDTFRRQHPGV+GYTYWG+RHGGR  N+GWRLDYFL+SESIAD V
Sbjct: 461  EERKSFATNFLSRGFVDTFRRQHPGVIGYTYWGYRHGGRKFNRGWRLDYFLVSESIADKV 520

Query: 1568 HDSYIMPHITGSDHCPIG 1621
            HDSYI+P +TGSDHCPIG
Sbjct: 521  HDSYILPDVTGSDHCPIG 538


>ref|XP_002322649.1| predicted protein [Populus trichocarpa] gi|222867279|gb|EEF04410.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  531 bits (1367), Expect = e-148
 Identities = 276/443 (62%), Positives = 326/443 (73%), Gaps = 12/443 (2%)
 Frame = +2

Query: 329  LQAMTVQQLRTMSKNFGISGRGSKHDLVSALKCFLDNEKDVNEDTQSKRKTKNLTSGEKA 508
            ++AMTVQ+LR   + FG+  +G K DLV ALK F+   K ++E+  S    +N++  +  
Sbjct: 12   IEAMTVQELRATLRKFGVPAKGRKGDLVFALKHFMG--KQIDEERVSFNSRENISLQKNT 69

Query: 509  QKTE---------LAAEVSSFQQKKRRGKLPIDDGDSLVVKSESVIMKERVSLKKTKVSD 661
            ++T            +EVS F+Q KRR K    + + + V +E V  K ++S+K      
Sbjct: 70   KRTSDESCVVSINTVSEVSGFKQSKRRMKQSPVEDEIVKVGTEIVTTKRKLSIK------ 123

Query: 662  KKPSPTKGKGVTQIEIDDGEFTDGVGLLKNSEEPWTKLAHKKPQEGWIPYNPRTMRPPPL 841
                                 TD +  L  +E PWT L+HKKPQ+GWIPYNPRTMRP PL
Sbjct: 124  ---------------------TDDLVTLPQAE-PWTVLSHKKPQKGWIPYNPRTMRPAPL 161

Query: 842  DDCTNFVKLISWNVNGLRALLKLDTLSAFAL--RENFDILCLQETKLQ-EKDVEKIKERL 1012
             D  N VKL+SWNVNGLRALLK +  SA  L  RENFD+LCLQETKLQ  KDV+ IK+ L
Sbjct: 162  TD-GNSVKLMSWNVNGLRALLKFEGFSALELAQRENFDVLCLQETKLQASKDVDSIKQCL 220

Query: 1013 IDGYENSFWTCSVSKLGYSGTAIISRIKPLSVKYGLGILDHDSEGRLVTLEFDTFYLISG 1192
            IDGYENSFWTCS +KLGYSGTAI+SRIKPLSV YGLGI DHDSEGR+VT EFD+FYL++ 
Sbjct: 221  IDGYENSFWTCSNAKLGYSGTAIVSRIKPLSVCYGLGIPDHDSEGRVVTAEFDSFYLVNT 280

Query: 1193 YVPNSGDGLRRLTYRVTQWDPSLSNYMKELEKSKPVILSGDLNCAHQEIDIFNPLGNKRS 1372
            YVPNSGDGL+RL+YR+TQWDPSLSNYMKELEKSKPVIL+GDLNCAHQEIDIFNP GNKRS
Sbjct: 281  YVPNSGDGLKRLSYRITQWDPSLSNYMKELEKSKPVILTGDLNCAHQEIDIFNPAGNKRS 340

Query: 1373 AGFTIEERESFEMNFLSKGFVDTFRRQHPGVVGYTYWGFRHGGRVDNKGWRLDYFLISES 1552
            AGFT EER+SF  NFLSKG VDTFR+QHP VVGYTYWG+RHGGR  NKGWRLDYFL+SES
Sbjct: 341  AGFTEEERQSFGSNFLSKGLVDTFRKQHPNVVGYTYWGYRHGGRKTNKGWRLDYFLVSES 400

Query: 1553 IADLVHDSYIMPHITGSDHCPIG 1621
            IAD VHDSYI+P + GSDHCPIG
Sbjct: 401  IADKVHDSYIVPDVNGSDHCPIG 423


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