BLASTX nr result
ID: Coptis21_contig00017742
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017742 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1... 123 1e-26 ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max] 123 1e-26 ref|XP_002510976.1| Oligosaccharide translocation protein rft1, ... 123 1e-26 ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat... 119 2e-25 ref|NP_196380.5| lipid transporter [Arabidopsis thaliana] gi|332... 110 1e-22 >ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max] Length = 518 Score = 123 bits (309), Expect = 1e-26 Identities = 60/77 (77%), Positives = 69/77 (89%) Frame = -3 Query: 233 MSKEDGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCIL 54 MSK D + + RTFKYL+ATQFLSRGIPFIFN+WIVRHLT+++YALYAVQF LLVTCIL Sbjct: 1 MSK-DKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCIL 59 Query: 53 FLSREGFRRACLRADIE 3 FLSREGFRRACLR D++ Sbjct: 60 FLSREGFRRACLRMDLK 76 >ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max] Length = 518 Score = 123 bits (309), Expect = 1e-26 Identities = 60/77 (77%), Positives = 69/77 (89%) Frame = -3 Query: 233 MSKEDGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCIL 54 MSK D + + RTFKYL+ATQFLSRGIPFIFN+WIVRHLT+++YALYAVQF LLVTCIL Sbjct: 1 MSK-DKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCIL 59 Query: 53 FLSREGFRRACLRADIE 3 FLSREGFRRACLR D++ Sbjct: 60 FLSREGFRRACLRMDLK 76 >ref|XP_002510976.1| Oligosaccharide translocation protein rft1, putative [Ricinus communis] gi|223550091|gb|EEF51578.1| Oligosaccharide translocation protein rft1, putative [Ricinus communis] Length = 436 Score = 123 bits (309), Expect = 1e-26 Identities = 54/73 (73%), Positives = 66/73 (90%) Frame = -3 Query: 221 DGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCILFLSR 42 + +F RTFKYL+ATQFLSRGIPFIFNSWI+RHLTE++YA+YAVQF L VTC+LFLSR Sbjct: 12 ESSDANFSRTFKYLLATQFLSRGIPFIFNSWIIRHLTEQDYAIYAVQFHLFVTCVLFLSR 71 Query: 41 EGFRRACLRADIE 3 EGFRRAC+RA+++ Sbjct: 72 EGFRRACMRAEVK 84 >ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus] gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1 homolog [Cucumis sativus] Length = 528 Score = 119 bits (299), Expect = 2e-25 Identities = 54/72 (75%), Positives = 64/72 (88%) Frame = -3 Query: 221 DGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCILFLSR 42 D + + RTF+YLMATQFLSRGIPFIFN WIVRHLTE++YA+YAVQF L VTC+LFLSR Sbjct: 15 DNDATNLSRTFRYLMATQFLSRGIPFIFNLWIVRHLTEEDYAVYAVQFHLFVTCVLFLSR 74 Query: 41 EGFRRACLRADI 6 EGFRRAC+RA++ Sbjct: 75 EGFRRACMRAEL 86 >ref|NP_196380.5| lipid transporter [Arabidopsis thaliana] gi|332003804|gb|AED91187.1| lipid transporter [Arabidopsis thaliana] Length = 611 Score = 110 bits (275), Expect = 1e-22 Identities = 49/74 (66%), Positives = 61/74 (82%) Frame = -3 Query: 233 MSKEDGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCIL 54 M+ +V+ R FK+ ++ QF+SR IPF+FNSWIVRHLTE++YALYA+QF L VTC+L Sbjct: 90 MATNSDNNVNLSRIFKFSLSRQFISRSIPFVFNSWIVRHLTERDYALYAIQFHLFVTCVL 149 Query: 53 FLSREGFRRACLRA 12 FLSREGFRRACLRA Sbjct: 150 FLSREGFRRACLRA 163