BLASTX nr result

ID: Coptis21_contig00017742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017742
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...   123   1e-26
ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]     123   1e-26
ref|XP_002510976.1| Oligosaccharide translocation protein rft1, ...   123   1e-26
ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat...   119   2e-25
ref|NP_196380.5| lipid transporter [Arabidopsis thaliana] gi|332...   110   1e-22

>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/77 (77%), Positives = 69/77 (89%)
 Frame = -3

Query: 233 MSKEDGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCIL 54
           MSK D  + +  RTFKYL+ATQFLSRGIPFIFN+WIVRHLT+++YALYAVQF LLVTCIL
Sbjct: 1   MSK-DKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCIL 59

Query: 53  FLSREGFRRACLRADIE 3
           FLSREGFRRACLR D++
Sbjct: 60  FLSREGFRRACLRMDLK 76


>ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/77 (77%), Positives = 69/77 (89%)
 Frame = -3

Query: 233 MSKEDGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCIL 54
           MSK D  + +  RTFKYL+ATQFLSRGIPFIFN+WIVRHLT+++YALYAVQF LLVTCIL
Sbjct: 1   MSK-DKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCIL 59

Query: 53  FLSREGFRRACLRADIE 3
           FLSREGFRRACLR D++
Sbjct: 60  FLSREGFRRACLRMDLK 76


>ref|XP_002510976.1| Oligosaccharide translocation protein rft1, putative [Ricinus
           communis] gi|223550091|gb|EEF51578.1| Oligosaccharide
           translocation protein rft1, putative [Ricinus communis]
          Length = 436

 Score =  123 bits (309), Expect = 1e-26
 Identities = 54/73 (73%), Positives = 66/73 (90%)
 Frame = -3

Query: 221 DGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCILFLSR 42
           +    +F RTFKYL+ATQFLSRGIPFIFNSWI+RHLTE++YA+YAVQF L VTC+LFLSR
Sbjct: 12  ESSDANFSRTFKYLLATQFLSRGIPFIFNSWIIRHLTEQDYAIYAVQFHLFVTCVLFLSR 71

Query: 41  EGFRRACLRADIE 3
           EGFRRAC+RA+++
Sbjct: 72  EGFRRACMRAEVK 84


>ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus]
           gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1
           homolog [Cucumis sativus]
          Length = 528

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/72 (75%), Positives = 64/72 (88%)
 Frame = -3

Query: 221 DGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCILFLSR 42
           D  + +  RTF+YLMATQFLSRGIPFIFN WIVRHLTE++YA+YAVQF L VTC+LFLSR
Sbjct: 15  DNDATNLSRTFRYLMATQFLSRGIPFIFNLWIVRHLTEEDYAVYAVQFHLFVTCVLFLSR 74

Query: 41  EGFRRACLRADI 6
           EGFRRAC+RA++
Sbjct: 75  EGFRRACMRAEL 86


>ref|NP_196380.5| lipid transporter [Arabidopsis thaliana]
           gi|332003804|gb|AED91187.1| lipid transporter
           [Arabidopsis thaliana]
          Length = 611

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/74 (66%), Positives = 61/74 (82%)
 Frame = -3

Query: 233 MSKEDGKSVDFGRTFKYLMATQFLSRGIPFIFNSWIVRHLTEKEYALYAVQFPLLVTCIL 54
           M+     +V+  R FK+ ++ QF+SR IPF+FNSWIVRHLTE++YALYA+QF L VTC+L
Sbjct: 90  MATNSDNNVNLSRIFKFSLSRQFISRSIPFVFNSWIVRHLTERDYALYAIQFHLFVTCVL 149

Query: 53  FLSREGFRRACLRA 12
           FLSREGFRRACLRA
Sbjct: 150 FLSREGFRRACLRA 163


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