BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017734
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    99   2e-18
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...    98   3e-18
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               97   5e-18
gb|ABR18786.1| class S F-box protein [Nicotiana alata]                 96   1e-17
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    95   3e-17

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
 Frame = +3

Query: 21  FDVVGTVNGLICFSEMGNYCSSPYYICNPITRDYVILPRSPMICYGHMASGFGFDSVSNQ 200
           F+VVG+ NGL+C ++  +      Y+ NP TRD+  LP+S       +  GFG+  ++  
Sbjct: 122 FEVVGSCNGLLCLAD--SLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEV 179

Query: 201 YKVFRIL-----------------RSNEVEVFTLGSDSWRLIRTNTSFIRSMNRSHALLN 329
           YKV +++                   +EV+V TLGS +WR +    S+      S AL+N
Sbjct: 180 YKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLG-KVSYQLDRWPSEALVN 238

Query: 330 GCIHWVADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLCVSL 509
           G +HWV   R        I+S ++A E+F  I  P    G  R + Y L+VLG  L  ++
Sbjct: 239 GRLHWVTRPR--RYVTRFIVSFDLADEQFREIPKPDCG-GLSRCN-YHLLVLGGCLSAAV 294

Query: 510 CDTRADRETWVMKEYGKLGSWTKEY 584
             +    E WVMKEY    SW KE+
Sbjct: 295 HRSNGKLEVWVMKEYDVKESWIKEF 319


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 12/200 (6%)
 Frame = +3

Query: 21  FDVVGTVNGLICFSEMGNYCSSPYYICNPITRDYVILPRSPMICYGHMASGFGFDSVSNQ 200
           +DVVG+ NG +C S+  +  +   +I NP TRDY+ LP+S       +  G GF   + +
Sbjct: 92  YDVVGSCNGFLCLSD--SLYNENLFIYNPFTRDYLELPKSKDFSNPDVVYGIGFHPQTKR 149

Query: 201 YKVFRILRS------------NEVEVFTLGSDSWRLIRTNTSFIRSMNRSHALLNGCIHW 344
            K+ +I+ S            +EV+VFTLG+ +WR I      + +  +S A +NG +HW
Sbjct: 150 LKILKIVYSKGFRRIQRRFHHSEVQVFTLGTSNWRSIGRIFHHL-AQGQSPAAINGRLHW 208

Query: 345 VADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLCVSLCDTRA 524
           V+  R      T++ S ++A+EEF  I +P    G     +++LM L + L   +  +  
Sbjct: 209 VSLPRRHYVGRTIV-SFDLASEEF--IDIPKPDYGSLSRCNFQLMNLNDCLSAVVYCSYG 265

Query: 525 DRETWVMKEYGKLGSWTKEY 584
             E WVM++YG   SW K +
Sbjct: 266 KMEIWVMEQYGVKESWVKSF 285


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 85/288 (29%), Positives = 128/288 (44%), Gaps = 27/288 (9%)
 Frame = +3

Query: 21  FDVVGTVNGLICFSEM---GNYCSSPYYICNPITRDYVILPR-------SPMICYGHMAS 170
           + +VG+ NGLIC +E    G+Y S   ++ NP  R++  LP+       SP++  G    
Sbjct: 110 YQIVGSSNGLICLTESNFKGSYLSLNLFLWNPAIREFQTLPKYHINNFTSPLMVVG---L 166

Query: 171 GFGFDSVSNQYKVFRIL-----RSNEVEVFTLGSDSWRLIRTNTSFIRSMNRSHALLNGC 335
           GF F  V N YKV RI+     +++E +V++L + SWR +  N       N S   +NG 
Sbjct: 167 GFAFHPVINDYKVVRIVYFMRNKTSEADVYSLRTGSWRKVDANICCYIHSNVSRTFINGA 226

Query: 336 IHWVADSRVD-GKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLCVSLC 512
           +HW+A  + +      +ILS ++A + F  I +P    G+       L      L V   
Sbjct: 227 LHWLAGKKNEMDNTDNLILSFDMAKDVFKEIMLPDF--GYDELIRKCLADYKGSLSVLFY 284

Query: 513 DTRADRE---TWVMKEYGKLGSWTK--------EYIFPQEFYPRLSHRCSHGMMEIRNNE 659
           D     E    WVM+EYG   SWTK        E I P EF+               N E
Sbjct: 285 DAYHSNENCDVWVMEEYGVAKSWTKHFTIRHEIEIIIPFEFFD--------------NGE 330

Query: 660 LVMFSKALGYYHCENKTFNPAKVVDVKGCGVGMTDFQIFFTGSLVSPR 803
            ++  K  G +     ++NP   +  +  GV      + +  SLVSPR
Sbjct: 331 AILQKKKSGGF----ISWNP-DGIRFRDLGVSGPARLVEYMESLVSPR 373


>gb|ABR18786.1| class S F-box protein [Nicotiana alata]
          Length = 388

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 82/269 (30%), Positives = 121/269 (44%), Gaps = 29/269 (10%)
 Frame = +3

Query: 24  DVVGTVNGLICFSEMGNYCSSPYYICNPITRDYVILPRSPMICY-GHMAS-----GFGFD 185
           ++VG  NGLI  ++  +       + NP T++Y++LP SP +C  G+  S     GFGFD
Sbjct: 112 ELVGPCNGLIVLTDDDDII----VLFNPATKNYMLLPPSPFVCSKGYHRSFIGGVGFGFD 167

Query: 186 SVSNQYKVFRIL------------RSNEVEVFTLGSDSWRLIRTNTSFIRSM--NRSHAL 323
           S+ N YK  RI             R  +VEV+ L SDSWR +      + ++  N+   +
Sbjct: 168 SIGNDYKFVRISEVFLDTYWGPEEREQKVEVYDLRSDSWRDLNHVDQQLPTIFWNQCFEM 227

Query: 324 L-NGCIHWVADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERL- 497
           L NG  HW A     G     IL  + +TE F  ++MP   N +     Y L V+ E L 
Sbjct: 228 LHNGAFHWYAV----GDLTYEILCFDFSTEIFRSMKMPESCNAYD-GKRYSLAVVNESLT 282

Query: 498 --CVSLCDTRADR-----ETWVMKEYGKLGSWTKEYIFPQEFYPRLSHRCSHGMMEIRNN 656
             C    D+  D+     + W+M EYG   SWTK+YI        +S       + I  +
Sbjct: 283 LICYPSPDSEIDQTQNTMDIWIMMEYGVNESWTKKYI--------ISPLPIESPLTIWRD 334

Query: 657 ELVMFSKALGYYHCENKTFNPAKVVDVKG 743
            L++     G     N   N  K  D++G
Sbjct: 335 HLLLLQSKTGQLISYNLRSNEVKEFDLRG 363


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 68/205 (33%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
 Frame = +3

Query: 21  FDVVGTVNGLICFSEMGNYCSSPYYICNPITRDYVILPRSPMICYGHMASGFGFDSVSNQ 200
           F+VVG+ NGL+C S+  +  +   YI NP T  Y  LP+S       + SGFGF+  + +
Sbjct: 122 FEVVGSCNGLLCLSD--SLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKE 179

Query: 201 YKVFRIL----------RS-------NEVEVFTLGSDSWRLIRTNTSFIRSMNRSHALLN 329
           YKV RI+          RS       +EV++ TLG   WR +    S+      S AL+N
Sbjct: 180 YKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSL-GKVSYRLVRRASGALVN 238

Query: 330 GCIHWVADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLCVSL 509
           G +HW++      K    ++S ++  E+F  +  P    G     +Y L+VL   L  ++
Sbjct: 239 GRLHWIS-RPCRNKPARRLVSFDLTDEQFREVSKPDC--GGLNRCNYHLVVLRGCLSAAV 295

Query: 510 CDTRADRETWVMKEYGKLGSWTKEY 584
                  E WVMKEY    SW KEY
Sbjct: 296 YCNYGRLEIWVMKEYNVKESWVKEY 320