BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017731
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528609.1| PREDICTED: nuclear pore complex protein Nup1...   365   1e-98
ref|XP_003627350.1| Nuclear pore complex protein Nup107 [Medicag...   353   5e-95
ref|XP_002882869.1| hypothetical protein ARALYDRAFT_478826 [Arab...   350   3e-94
ref|NP_850581.1| uncharacterized protein [Arabidopsis thaliana] ...   348   1e-93
gb|AAP21175.1| AT3g14120/MAG2_7 [Arabidopsis thaliana]                348   1e-93

>ref|XP_003528609.1| PREDICTED: nuclear pore complex protein Nup107-like [Glycine max]
          Length = 1080

 Score =  365 bits (936), Expect = 1e-98
 Identities = 200/337 (59%), Positives = 234/337 (69%), Gaps = 33/337 (9%)
 Frame = -2

Query: 912  SSFDPEDLTTREQFRRYGKRHXXXXXXXXXXXXXSKI-----LFDGNNNIEIRPNAALFL 748
            S FDP +L++R+QFRRYGKRH             SK+     L+DG + I    NAAL L
Sbjct: 12   SYFDPHNLSSRQQFRRYGKRHSSSGASIQYDNSASKLSETGLLYDGQS-IHSPTNAALVL 70

Query: 747  EDIKQEVE--DDSSLDIKPHKSSSRRVTKV--------------------------DYDD 652
            E+IKQEVE  D   L+ K   S+ R+++ V                             D
Sbjct: 71   ENIKQEVESLDADYLEEKTPYSTRRKLSAVIDGVPGVDAGFDSGRYSLKACKTEGDSLGD 130

Query: 651  GVDSTFGLFASLLDSAIQGLMPIPELILQFETACRNVSESIKYGSNGRHRVVEDKLMKQK 472
            G ++ F LFASLLDS++QGLMPI +LIL+ E ACRNVSESI+YG N RHRVVEDKLM+QK
Sbjct: 131  GAETIFTLFASLLDSSLQGLMPIADLILRVENACRNVSESIRYGLNIRHRVVEDKLMRQK 190

Query: 471  ARLLLDEAASWSLLWYIYGKENEDIPQDHLLSPTISHLEACHFVTSDHTAQLCLRIVQWL 292
            A+LLLDEAA+WSLLW++YGK  E++ +D +L    SH+ AC FV  DHTAQLCLRIVQWL
Sbjct: 191  AQLLLDEAATWSLLWFLYGKGTEELSKDQILVSGTSHVVACEFVVEDHTAQLCLRIVQWL 250

Query: 291  EGLASKALDLENKVRGCHVGSYLPSSGVWHHSQRLLKKGRHVPAAVQHLDFDAPTREIAQ 112
            EGLASKALDLE KVRG HVGSYLPS GVWHH+QR LKKG      V HLDFDAPTRE A 
Sbjct: 251  EGLASKALDLEAKVRGSHVGSYLPSCGVWHHTQRYLKKGNLDMNVVHHLDFDAPTRENAN 310

Query: 111  LHPDDKKQDDSLLEDVWTLLRAGRLDEACELCRTAGQ 1
            L PDDKKQD+SLLEDVW LLRAGRL+EAC LCR+AGQ
Sbjct: 311  LLPDDKKQDESLLEDVWILLRAGRLEEACGLCRSAGQ 347


>ref|XP_003627350.1| Nuclear pore complex protein Nup107 [Medicago truncatula]
            gi|355521372|gb|AET01826.1| Nuclear pore complex protein
            Nup107 [Medicago truncatula]
          Length = 599

 Score =  353 bits (905), Expect = 5e-95
 Identities = 201/370 (54%), Positives = 230/370 (62%), Gaps = 68/370 (18%)
 Frame = -2

Query: 906  FDPEDLTTREQFRRYGKRHXXXXXXXXXXXXXSKI----LFDGNNNIEIRPNAALFLEDI 739
            FDP+DLTTRE+FRRYGKRH             SK+    LF    NI    NAAL LE+I
Sbjct: 12   FDPQDLTTREKFRRYGKRHLNSGASVEQDYSASKLSESGLFYDGQNIHSPTNAALILENI 71

Query: 738  KQEVE-------DDSSLDIKPHKSSSRRVTKVDYDDGVDST------------------- 637
            KQEVE       DD SL     +SS+        DDG DS                    
Sbjct: 72   KQEVESLDADYLDDKSLYSSRKRSSADVPGIPGMDDGFDSVRYSLKACKQEGDSLGDDAD 131

Query: 636  --FGLFASLLDSAIQGLMPIPELILQFETACRNVSESIKYGSNGRHRVVEDKLMKQKARL 463
              F  FASL D+++ G+MPIP+LIL+FE  CRNVSESI+YG N RHRVVEDKLM+QKA+L
Sbjct: 132  NIFNSFASLFDTSLTGMMPIPDLILRFENECRNVSESIRYGLNIRHRVVEDKLMRQKAQL 191

Query: 462  LLDEAASWSLLWYIYGKENEDIPQDHLLSPTISHLEACHFVTSDHTAQLCLRIVQWLEGL 283
            LLDEAA+WSLLW++YG+E E++ ++ +L    SHL AC FVT DH AQLCLRIVQWLEGL
Sbjct: 192  LLDEAATWSLLWFLYGEETEELSKEKILVKQTSHLMACEFVTEDHIAQLCLRIVQWLEGL 251

Query: 282  ASKALDLENK------------------------------------VRGCHVGSYLPSSG 211
            ASKALDLE K                                    VRG HVGSYLPSSG
Sbjct: 252  ASKALDLEAKYVGNMPSLLSSPSCLNCDNFGSFHCSHHYLHVLAMRVRGSHVGSYLPSSG 311

Query: 210  VWHHSQRLLKKGRHVPAAVQHLDFDAPTREIAQLHPDDKKQDDSLLEDVWTLLRAGRLDE 31
            VWHH+QR L KG      V HLDFDAPTRE A + PDDKKQD+SLLEDVWTLLRAGRL+E
Sbjct: 312  VWHHTQRYLNKGTSDRNVVHHLDFDAPTRENANILPDDKKQDESLLEDVWTLLRAGRLEE 371

Query: 30   ACELCRTAGQ 1
            AC LCR+AGQ
Sbjct: 372  ACGLCRSAGQ 381


>ref|XP_002882869.1| hypothetical protein ARALYDRAFT_478826 [Arabidopsis lyrata subsp.
            lyrata] gi|297328709|gb|EFH59128.1| hypothetical protein
            ARALYDRAFT_478826 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  350 bits (899), Expect = 3e-94
 Identities = 186/336 (55%), Positives = 236/336 (70%), Gaps = 32/336 (9%)
 Frame = -2

Query: 912  SSFDPEDLTTREQFRRYGKRHXXXXXXXXXXXXXS--KILFDGNNNIEIRPNAALFLEDI 739
            S FDPE L+ R+QFRRY KRH             S  ++L+DG+N I    N AL LE+I
Sbjct: 10   SYFDPEVLSVRDQFRRYRKRHSTSPHEEMLSSYVSENRLLYDGHN-IHSPTNTALLLENI 68

Query: 738  KQEVE---------------------------DDSSLDIKPHKSSSRRVTKVDYDD---G 649
            K+EV+                           DD+    +  +S S +  K++ D+    
Sbjct: 69   KEEVDNFHTDHYEGTPANPISASRRESVGILDDDNENLFRRVESQSLKACKIENDELAES 128

Query: 648  VDSTFGLFASLLDSAIQGLMPIPELILQFETACRNVSESIKYGSNGRHRVVEDKLMKQKA 469
             D+TF LFASL DSA+QGLM IP+L+L+ E +CR+VS+SI+YGS+ RHRVVEDKLM+QKA
Sbjct: 129  GDTTFALFASLFDSALQGLMSIPDLMLRLEESCRHVSQSIRYGSDIRHRVVEDKLMRQKA 188

Query: 468  RLLLDEAASWSLLWYIYGKENEDIPQDHLLSPTISHLEACHFVTSDHTAQLCLRIVQWLE 289
            +LLL EAASWSLLW +YGK  E++P+D +L P+ SH+EAC FV +DHTAQLCLRIV WLE
Sbjct: 189  QLLLGEAASWSLLWNLYGKGTEEVPEDLILIPSTSHVEACQFVLNDHTAQLCLRIVLWLE 248

Query: 288  GLASKALDLENKVRGCHVGSYLPSSGVWHHSQRLLKKGRHVPAAVQHLDFDAPTREIAQL 109
             LASK+LDLE KVRG HVG+YLP++GVWHH+QR LKK       V HLDFDAPTRE ++L
Sbjct: 249  ELASKSLDLERKVRGSHVGTYLPNAGVWHHTQRYLKKNGSSADTVHHLDFDAPTREHSRL 308

Query: 108  HPDDKKQDDSLLEDVWTLLRAGRLDEACELCRTAGQ 1
             PDD KQD+S+LEDVWTL+RAGR++EAC+LCR+AGQ
Sbjct: 309  LPDDFKQDESVLEDVWTLIRAGRIEEACDLCRSAGQ 344


>ref|NP_850581.1| uncharacterized protein [Arabidopsis thaliana]
            gi|332641952|gb|AEE75473.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 1077

 Score =  348 bits (893), Expect = 1e-93
 Identities = 184/336 (54%), Positives = 233/336 (69%), Gaps = 32/336 (9%)
 Frame = -2

Query: 912  SSFDPEDLTTREQFRRYGKRHXXXXXXXXXXXXXS--KILFDGNNNIEIRPNAALFLEDI 739
            S FDPE L+ R+QFRRY KRH             S  ++L+DG+N I    N AL LE+I
Sbjct: 10   SYFDPEALSVRDQFRRYRKRHSTSPHEEMLSSNVSENRLLYDGHN-IHSPTNTALLLENI 68

Query: 738  KQEVE---------------------------DDSSLDIKPHKSSSRRVTKVDYDD---G 649
            K+EV+                           DD     +  +S S +  K++ D+    
Sbjct: 69   KEEVDNFHTDHYEGTPTNPISASRRESVGILNDDDEALFRRVESQSLKACKIENDELAES 128

Query: 648  VDSTFGLFASLLDSAIQGLMPIPELILQFETACRNVSESIKYGSNGRHRVVEDKLMKQKA 469
             D+TF LFASL DSA+QGLM IP L+L+ E +CRNVS+SI+YGS+ RHR VEDKLM+QKA
Sbjct: 129  GDTTFALFASLFDSALQGLMSIPNLMLRLEESCRNVSQSIRYGSDIRHRAVEDKLMRQKA 188

Query: 468  RLLLDEAASWSLLWYIYGKENEDIPQDHLLSPTISHLEACHFVTSDHTAQLCLRIVQWLE 289
            +LLL EAASWSLLW +YGK  +++P++ +L P+ SHLEAC FV +DHTAQLCLRIV WLE
Sbjct: 189  QLLLGEAASWSLLWNLYGKGTDEVPENLILIPSTSHLEACQFVLNDHTAQLCLRIVMWLE 248

Query: 288  GLASKALDLENKVRGCHVGSYLPSSGVWHHSQRLLKKGRHVPAAVQHLDFDAPTREIAQL 109
             LASK+LDLE KV+G HVG+YLP++GVWHH+QR LKK       + HLDFDAPTRE A+L
Sbjct: 249  ELASKSLDLERKVQGSHVGTYLPNAGVWHHTQRYLKKNGSNADTLHHLDFDAPTREHARL 308

Query: 108  HPDDKKQDDSLLEDVWTLLRAGRLDEACELCRTAGQ 1
             PDD KQD+S+LEDVWTL+RAGR++EAC+LCR+AGQ
Sbjct: 309  LPDDYKQDESVLEDVWTLIRAGRIEEACDLCRSAGQ 344


>gb|AAP21175.1| AT3g14120/MAG2_7 [Arabidopsis thaliana]
          Length = 1077

 Score =  348 bits (893), Expect = 1e-93
 Identities = 184/336 (54%), Positives = 233/336 (69%), Gaps = 32/336 (9%)
 Frame = -2

Query: 912  SSFDPEDLTTREQFRRYGKRHXXXXXXXXXXXXXS--KILFDGNNNIEIRPNAALFLEDI 739
            S FDPE L+ R+QFRRY KRH             S  ++L+DG+N I    N AL LE+I
Sbjct: 10   SYFDPEALSVRDQFRRYRKRHSTSPHEEMLSSNVSENRLLYDGHN-IHSPTNTALLLENI 68

Query: 738  KQEVE---------------------------DDSSLDIKPHKSSSRRVTKVDYDD---G 649
            K+EV+                           DD     +  +S S +  K++ D+    
Sbjct: 69   KEEVDNFHTDHYEGTPTNPISASRRESVGILNDDDEALFRRVESQSLKACKIENDELAES 128

Query: 648  VDSTFGLFASLLDSAIQGLMPIPELILQFETACRNVSESIKYGSNGRHRVVEDKLMKQKA 469
             D+TF LFASL DSA+QGLM IP L+L+ E +CRNVS+SI+YGS+ RHR VEDKLM+QKA
Sbjct: 129  GDTTFALFASLFDSALQGLMSIPNLMLRLEESCRNVSQSIRYGSDIRHRAVEDKLMRQKA 188

Query: 468  RLLLDEAASWSLLWYIYGKENEDIPQDHLLSPTISHLEACHFVTSDHTAQLCLRIVQWLE 289
            +LLL EAASWSLLW +YGK  +++P++ +L P+ SHLEAC FV +DHTAQLCLRIV WLE
Sbjct: 189  QLLLGEAASWSLLWNLYGKGTDEVPENLILIPSTSHLEACQFVLNDHTAQLCLRIVMWLE 248

Query: 288  GLASKALDLENKVRGCHVGSYLPSSGVWHHSQRLLKKGRHVPAAVQHLDFDAPTREIAQL 109
             LASK+LDLE KV+G HVG+YLP++GVWHH+QR LKK       + HLDFDAPTRE A+L
Sbjct: 249  ELASKSLDLERKVQGSHVGTYLPNAGVWHHTQRYLKKNGSNADTLHHLDFDAPTREHARL 308

Query: 108  HPDDKKQDDSLLEDVWTLLRAGRLDEACELCRTAGQ 1
             PDD KQD+S+LEDVWTL+RAGR++EAC+LCR+AGQ
Sbjct: 309  LPDDYKQDESVLEDVWTLIRAGRIEEACDLCRSAGQ 344