BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017726
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   6e-09
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    62   6e-08
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...    62   6e-08
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   8e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-07

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -2

Query: 209 MRILSWNCRGCGNPATMRHLTNLVNTHNPDILFLSETKLTSNSISCLNQLLKFPHFFDVP 30
           M+IL WNC+G GNP T+R L  L+ ++ PD LF+SETK+T N +    + L F   F V 
Sbjct: 1   MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 29  PINTAGG 9
            +  AGG
Sbjct: 61  CVGRAGG 67


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|62733115|gb|AAX95232.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 1324

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/55 (49%), Positives = 36/55 (65%)
 Frame = -2

Query: 209 MRILSWNCRGCGNPATMRHLTNLVNTHNPDILFLSETKLTSNSISCLNQLLKFPH 45
           M+I++WNCRG GN  T+R L NL    +PDILFLS TK+ +N + C    L  P+
Sbjct: 448 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPN 502


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1301

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/55 (49%), Positives = 36/55 (65%)
 Frame = -2

Query: 209 MRILSWNCRGCGNPATMRHLTNLVNTHNPDILFLSETKLTSNSISCLNQLLKFPH 45
           M+I++WNCRG GN  T+R L NL    +PDILFLS TK+ +N + C    L  P+
Sbjct: 425 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPN 479


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/67 (43%), Positives = 38/67 (56%)
 Frame = -2

Query: 209 MRILSWNCRGCGNPATMRHLTNLVNTHNPDILFLSETKLTSNSISCLNQLLKFPHFFDVP 30
           M IL WNCRG GNP ++R L +  N   PDI+F+SET +    +  L   L F + F V 
Sbjct: 1   MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVA 60

Query: 29  PINTAGG 9
            +  AGG
Sbjct: 61  SVGRAGG 67


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/67 (44%), Positives = 35/67 (52%)
 Frame = -2

Query: 209 MRILSWNCRGCGNPATMRHLTNLVNTHNPDILFLSETKLTSNSISCLNQLLKFPHFFDVP 30
           M IL WNCRG GNP T+R L      + PDI+FLSET +       L   L F + F V 
Sbjct: 1   MNILCWNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVS 60

Query: 29  PINTAGG 9
               AGG
Sbjct: 61  SRGRAGG 67