BLASTX nr result

ID: Coptis21_contig00017721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017721
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632548.1| PREDICTED: probable LRR receptor-like serine...   116   2e-24
emb|CBI31162.3| unnamed protein product [Vitis vinifera]              116   2e-24
emb|CAN80670.1| hypothetical protein VITISV_025635 [Vitis vinifera]   116   2e-24
ref|XP_002323098.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002531806.1| ATP binding protein, putative [Ricinus commu...   108   6e-22

>ref|XP_003632548.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At5g37450-like [Vitis vinifera]
          Length = 949

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/137 (45%), Positives = 81/137 (59%)
 Frame = +1

Query: 1   RLRMYLKLFPEFNNHSNTFNESEIRRIRSLFTEFALPHTPDSDIFGSYDLLNFTLSGPYA 180
           RLRMYLK FP++NN SNTFN SEI+RIR L T F +   P  DIFG YDLLNFTL GPY+
Sbjct: 485 RLRMYLKFFPQYNNQSNTFNTSEIQRIRDLITTFTI---PGDDIFGPYDLLNFTLVGPYS 541

Query: 181 NVVLDFPRSGISKGXXXXXXXXXXXXXXXXXXXXXXXXMRRHAAKHCTNSRKRCLSNTRI 360
           +V L+  +SGISKG                         ++       +S+++  S T +
Sbjct: 542 DVDLESKKSGISKGVIVGIVLGGLSFATAIVLVIAVVFWKKQTRHGHKDSKQQPFSKTAV 601

Query: 361 KIDGVKGFSLGQMALAT 411
            I+GVKGFS G+M +AT
Sbjct: 602 IIEGVKGFSFGEMEIAT 618


>emb|CBI31162.3| unnamed protein product [Vitis vinifera]
          Length = 1821

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/137 (45%), Positives = 81/137 (59%)
 Frame = +1

Query: 1   RLRMYLKLFPEFNNHSNTFNESEIRRIRSLFTEFALPHTPDSDIFGSYDLLNFTLSGPYA 180
           RLRMYLK FP++NN SNTFN SEI+RIR L T F +   P  DIFG YDLLNFTL GPY+
Sbjct: 465 RLRMYLKFFPQYNNQSNTFNTSEIQRIRDLITTFTI---PGDDIFGPYDLLNFTLVGPYS 521

Query: 181 NVVLDFPRSGISKGXXXXXXXXXXXXXXXXXXXXXXXXMRRHAAKHCTNSRKRCLSNTRI 360
           +V L+  +SGISKG                         ++       +S+++  S T +
Sbjct: 522 DVDLESKKSGISKGVIVGIVLGGLSFATAIVLVIAVVFWKKQTRHGHKDSKQQPFSKTAV 581

Query: 361 KIDGVKGFSLGQMALAT 411
            I+GVKGFS G+M +AT
Sbjct: 582 IIEGVKGFSFGEMEIAT 598



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/137 (38%), Positives = 71/137 (51%)
 Frame = +1

Query: 1    RLRMYLKLFPEFNNHSNTFNESEIRRIRSLFTEFALPHTPDSDIFGSYDLLNFTLSGPYA 180
            RLRM+ KLFP +NNH  TFN SE+ RIR +F  +  P    +D FG Y+LL+F L GPY+
Sbjct: 1360 RLRMHFKLFPTYNNH--TFNTSEVLRIRGIFASWDFP---SNDFFGPYELLSFPLLGPYS 1414

Query: 181  NVVLDFPRSGISKGXXXXXXXXXXXXXXXXXXXXXXXXMRRHAAKHCTNSRKRCLSNTRI 360
             +        +S G                        +RRH+    T SR+R  S   +
Sbjct: 1415 GIDSATHGKSLSMGIWVAILLGAIACAIAISITVTLLIVRRHSKYQNTVSRRRLSSTISM 1474

Query: 361  KIDGVKGFSLGQMALAT 411
            KIDGV+ F+  +MALAT
Sbjct: 1475 KIDGVRDFTYREMALAT 1491


>emb|CAN80670.1| hypothetical protein VITISV_025635 [Vitis vinifera]
          Length = 775

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/137 (45%), Positives = 81/137 (59%)
 Frame = +1

Query: 1   RLRMYLKLFPEFNNHSNTFNESEIRRIRSLFTEFALPHTPDSDIFGSYDLLNFTLSGPYA 180
           RLRMYLK FP++NN SNTFN SEI+RIR L T F +   P  DIFG YDLLNFTL GPY+
Sbjct: 287 RLRMYLKFFPQYNNQSNTFNTSEIQRIRDLITTFTI---PGDDIFGPYDLLNFTLVGPYS 343

Query: 181 NVVLDFPRSGISKGXXXXXXXXXXXXXXXXXXXXXXXXMRRHAAKHCTNSRKRCLSNTRI 360
           +V L+  +SGISKG                         ++       +S+++  S T +
Sbjct: 344 DVDLESKKSGISKGVIVGIVLGGLSFATAIVLVIAVVFWKKQTRHGHKDSKQQPFSKTAV 403

Query: 361 KIDGVKGFSLGQMALAT 411
            I+GVKGFS G+M +AT
Sbjct: 404 IIEGVKGFSFGEMEIAT 420


>ref|XP_002323098.1| predicted protein [Populus trichocarpa] gi|222867728|gb|EEF04859.1|
           predicted protein [Populus trichocarpa]
          Length = 959

 Score =  110 bits (274), Expect = 2e-22
 Identities = 65/138 (47%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   RLRMYLKLFPEFNN-HSNTFNESEIRRIRSLFTEFALPHTPDSDIFGSYDLLNFTLSGPY 177
           RLRM+LK+FP  NN HSNTFN SE+ RIR  FT +   H P  D+FG Y+LLNFTL GPY
Sbjct: 486 RLRMHLKIFPPANNVHSNTFNVSEVGRIRGAFTSW---HFPGDDLFGPYELLNFTLVGPY 542

Query: 178 ANVVLDFPRSGISKGXXXXXXXXXXXXXXXXXXXXXXXXMRRHAAKHCTNSRKRCLSNTR 357
           A +  D     IS G                         RR+A KH   SR+   S   
Sbjct: 543 AAIHFDTKGKNISIGIWVAVILGAIACTVAVSAVVTLLIARRYARKHRNLSRRHSSSKAS 602

Query: 358 IKIDGVKGFSLGQMALAT 411
           IKIDGVKGF+  +MALAT
Sbjct: 603 IKIDGVKGFTFKEMALAT 620


>ref|XP_002531806.1| ATP binding protein, putative [Ricinus communis]
           gi|223528540|gb|EEF30563.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 961

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   RLRMYLKLFPEFNN-HSNTFNESEIRRIRSLFTEFALPHTPDSDIFGSYDLLNFTLSGPY 177
           RLRMYLKL+P +N+ HSNTFN +E++RIR +FT +  P T   D FG Y+LLNFTL GPY
Sbjct: 487 RLRMYLKLYPAWNDAHSNTFNSTEVQRIRGVFTSWTFPRT---DFFGPYELLNFTLQGPY 543

Query: 178 ANVVLDFPRSGISKGXXXXXXXXXXXXXXXXXXXXXXXXMRRHAAKHCTNSRKRCLSNTR 357
           + + +    + ISKG                        +RRHA      SRKR  S   
Sbjct: 544 SQISIGTQSTKISKGVWAAIIIGAISFTVIASVIVTILILRRHAGYERNLSRKRLSSKIS 603

Query: 358 IKIDGVKGFSLGQMALAT 411
           +KIDGVK F+  +M LAT
Sbjct: 604 MKIDGVKFFTFKEMTLAT 621


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