BLASTX nr result
ID: Coptis21_contig00017720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017720 (211 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-... 89 4e-16 emb|CBI33563.3| unnamed protein product [Vitis vinifera] 89 4e-16 emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera] 89 4e-16 dbj|BAA85457.1| S-locus protein 8 [Brassica rapa] 86 4e-15 ref|XP_002302984.1| methionyl-trna formyltransferase [Populus tr... 85 5e-15 >ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera] Length = 365 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/59 (71%), Positives = 46/59 (77%) Frame = +3 Query: 3 TRTCSLSDVQYDEKDDVTFIGGSLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 179 TR C S++Q +E DDV FI +LVFPC G SALEVLEVQLPGKKVV A FWNGLRGQ Sbjct: 301 TRVCGQSNIQVNEADDVRFIKDALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 359 >emb|CBI33563.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/59 (71%), Positives = 46/59 (77%) Frame = +3 Query: 3 TRTCSLSDVQYDEKDDVTFIGGSLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 179 TR C S++Q +E DDV FI +LVFPC G SALEVLEVQLPGKKVV A FWNGLRGQ Sbjct: 328 TRVCGQSNIQVNEADDVRFIKDALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 386 >emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera] Length = 382 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/59 (71%), Positives = 46/59 (77%) Frame = +3 Query: 3 TRTCSLSDVQYDEKDDVTFIGGSLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 179 TR C S++Q +E DDV FI +LVFPC G SALEVLEVQLPGKKVV A FWNGLRGQ Sbjct: 318 TRVCGQSNIQVNEADDVRFIKDALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQ 376 >dbj|BAA85457.1| S-locus protein 8 [Brassica rapa] Length = 197 Score = 85.5 bits (210), Expect = 4e-15 Identities = 41/59 (69%), Positives = 46/59 (77%) Frame = +3 Query: 3 TRTCSLSDVQYDEKDDVTFIGGSLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 179 TR C ++V E+D VTF GSLVFPCGG +ALEVLEVQLPGKK + AT FWNGLRGQ Sbjct: 134 TRICQSTEVLNGEQDYVTFKKGSLVFPCGGGTALEVLEVQLPGKKAIDATAFWNGLRGQ 192 >ref|XP_002302984.1| methionyl-trna formyltransferase [Populus trichocarpa] gi|222844710|gb|EEE82257.1| methionyl-trna formyltransferase [Populus trichocarpa] Length = 356 Score = 85.1 bits (209), Expect = 5e-15 Identities = 40/59 (67%), Positives = 45/59 (76%) Frame = +3 Query: 3 TRTCSLSDVQYDEKDDVTFIGGSLVFPCGGHSALEVLEVQLPGKKVVTATTFWNGLRGQ 179 TR C S VQ DE DD+T++ SLVFPCG +ALEVLE+QLPGKKV A FWNGLRGQ Sbjct: 293 TRVCDRSIVQGDEADDITYVKDSLVFPCGRSTALEVLELQLPGKKVFRAAAFWNGLRGQ 351