BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017716
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein ...   160   8e-38
gb|ABW70800.1| chloroplast light harvesting chlorophyll a/b bind...   160   1e-37
ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [P...   160   1e-37
ref|XP_002306927.1| light-harvesting complex II protein Lhcb1 [P...   160   1e-37
ref|XP_002307725.1| light-harvesting complex II protein Lhcb1 [P...   160   1e-37

>gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
          Length = 267

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/78 (98%), Positives = 78/78 (100%)
 Frame = +1

Query: 1   IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILA 180
           IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILA
Sbjct: 102 IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILA 161

Query: 181 IWATQVILMGAVEGYRIA 234
           IWATQVILMGAVEGYR+A
Sbjct: 162 IWATQVILMGAVEGYRVA 179


>gb|ABW70800.1| chloroplast light harvesting chlorophyll a/b binding protein
           [Populus euphratica]
          Length = 263

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = +1

Query: 1   IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILA 180
           IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILA
Sbjct: 98  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILA 157

Query: 181 IWATQVILMGAVEGYRIA 234
           IWATQV+LMGAVEGYRIA
Sbjct: 158 IWATQVVLMGAVEGYRIA 175


>ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
           gi|222859802|gb|EEE97349.1| light-harvesting complex II
           protein Lhcb1 [Populus trichocarpa]
          Length = 264

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = +1

Query: 1   IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILA 180
           IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILA
Sbjct: 99  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILA 158

Query: 181 IWATQVILMGAVEGYRIA 234
           IWATQV+LMGAVEGYRIA
Sbjct: 159 IWATQVVLMGAVEGYRIA 176


>ref|XP_002306927.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
           gi|118487931|gb|ABK95787.1| unknown [Populus
           trichocarpa] gi|118489514|gb|ABK96559.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|118489848|gb|ABK96723.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489863|gb|ABK96730.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222856376|gb|EEE93923.1| light-harvesting complex II
           protein Lhcb1 [Populus trichocarpa]
          Length = 264

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = +1

Query: 1   IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILA 180
           IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILA
Sbjct: 99  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILA 158

Query: 181 IWATQVILMGAVEGYRIA 234
           IWATQV+LMGAVEGYRIA
Sbjct: 159 IWATQVVLMGAVEGYRIA 176


>ref|XP_002307725.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
           gi|118485884|gb|ABK94788.1| unknown [Populus
           trichocarpa] gi|222857174|gb|EEE94721.1|
           light-harvesting complex II protein Lhcb1 [Populus
           trichocarpa]
          Length = 264

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = +1

Query: 1   IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILA 180
           IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILA
Sbjct: 99  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILA 158

Query: 181 IWATQVILMGAVEGYRIA 234
           IWATQV+LMGAVEGYRIA
Sbjct: 159 IWATQVVLMGAVEGYRIA 176