BLASTX nr result

ID: Coptis21_contig00017703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017703
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63047.1| hypothetical protein VITISV_044031 [Vitis vinifera]   332   8e-89
ref|XP_002519130.1| conserved hypothetical protein [Ricinus comm...   326   8e-87
ref|XP_002313078.1| predicted protein [Populus trichocarpa] gi|2...   311   3e-82
ref|XP_003541116.1| PREDICTED: transmembrane protein 45B-like [G...   310   3e-82
ref|XP_003606844.1| Transmembrane protein 45B [Medicago truncatu...   304   3e-80

>emb|CAN63047.1| hypothetical protein VITISV_044031 [Vitis vinifera]
          Length = 294

 Score =  332 bits (852), Expect = 8e-89
 Identities = 166/277 (59%), Positives = 189/277 (68%)
 Frame = -3

Query: 1100 MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 921
            MGTFVGH+VPG AL LLGLWHT NTI+AY LKG  NF  +FWYPFN      KY      
Sbjct: 1    MGTFVGHLVPGLALTLLGLWHTINTIRAYALKGSTNFTVKFWYPFNSPFPNLKYLELIFI 60

Query: 920  XXXXXXXXXSQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHLPEVFMWFVG 741
                      QVLDF     SF LD+ EHA+MFLHLAI+AG  L  ELTH  E      G
Sbjct: 61   LFFSIFAIFMQVLDFPFIRLSFELDNFEHASMFLHLAIFAGFTLSAELTHSLEGLSGVSG 120

Query: 740  LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 561
            +LAASVF QELFLLHFHSTDHVGLEGHYHWLLQLIV+VS V+ALA  SFP          
Sbjct: 121  ILAASVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVLVSLVAALAATSFPTSFPAALVLS 180

Query: 560  XXXLFQGCWFLNMGFILWVPRFVPKGCMVSFVEGGNGMHGAVTCGTNDAFLRARALANLQ 381
               +FQGCWF+NMGF+LWVP FVPKGC V      + MHGAV CG++DA LRARALAN+Q
Sbjct: 181  TAVVFQGCWFMNMGFMLWVPEFVPKGCKVQLTSSSDSMHGAVACGSHDADLRARALANMQ 240

Query: 380  FSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHS 270
            FS IL+ I++   SLCL L GK  ++  SIEYE++HS
Sbjct: 241  FSWILSGILMFVGSLCLKLVGKCXSKAGSIEYEQLHS 277


>ref|XP_002519130.1| conserved hypothetical protein [Ricinus communis]
            gi|223541793|gb|EEF43341.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 294

 Score =  326 bits (835), Expect = 8e-87
 Identities = 159/279 (56%), Positives = 194/279 (69%), Gaps = 1/279 (0%)
 Frame = -3

Query: 1100 MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 921
            MGTFVGH VP  ALILLGLWHT NT++AY LKG  +F+++FWYPF     + K+      
Sbjct: 9    MGTFVGHFVPALALILLGLWHTINTVRAYCLKGSTSFNAKFWYPFYGTLSRLKHFELIFV 68

Query: 920  XXXXXXXXXSQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHLPEVFMWFVG 741
                      Q+LDF    ++F LD+ EHATMFLHLAI++G  L  E+TH  E+     G
Sbjct: 69   LSFSAFAIIVQILDFPLLRYAFKLDNFEHATMFLHLAIFSGFTLFTEITHSSEILSGVSG 128

Query: 740  LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 561
            +LA+SVF QELFLLHFHSTDHVGLEGHYHWLLQLIV VS VSALA  +FP          
Sbjct: 129  ILASSVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVFVSLVSALAATNFPSSFPAALVLS 188

Query: 560  XXXLFQGCWFLNMGFILWVPRFVPKGCMVSFVEGGN-GMHGAVTCGTNDAFLRARALANL 384
               +FQGCWF+NMGF+LWVP  +P+GC++   E    GMHGAVTCG+ DA LRARALANL
Sbjct: 189  ISVVFQGCWFMNMGFMLWVPNLIPEGCVMQLSEANTYGMHGAVTCGSIDADLRARALANL 248

Query: 383  QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSR 267
            QFS ILAAI++ T   CL  AG+  +R QSIEYE++H++
Sbjct: 249  QFSWILAAILLFTGGACLKSAGRCTSRVQSIEYEQLHNK 287


>ref|XP_002313078.1| predicted protein [Populus trichocarpa] gi|222849486|gb|EEE87033.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  311 bits (796), Expect = 3e-82
 Identities = 157/280 (56%), Positives = 189/280 (67%), Gaps = 1/280 (0%)
 Frame = -3

Query: 1100 MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 921
            MGTFVGH+VPG AL LLGLWHT NTI+A+  KG  NF  +FWYPF     + K+      
Sbjct: 1    MGTFVGHIVPGLALTLLGLWHTVNTIRAFCNKGCTNFTVKFWYPFYGPVSRLKHLELIFI 60

Query: 920  XXXXXXXXXSQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHLPEVFMWFVG 741
                      Q+LDF    FSF LDS EHA++FLHLAI+AG  L  E++   ++     G
Sbjct: 61   LSFSVLAIFMQLLDFPSLRFSFKLDSFEHASIFLHLAIFAGFTLSAEISQSSDILSGVSG 120

Query: 740  LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 561
            +LAA VF QELFLLHFHSTDHVGLEGHYHWLLQLIV VS ++ALA  +FP          
Sbjct: 121  ILAAFVFGQELFLLHFHSTDHVGLEGHYHWLLQLIVFVSLLAALAATNFPNSFPAALVLS 180

Query: 560  XXXLFQGCWFLNMGFILWVPRFVPKGCMVSFVEGG-NGMHGAVTCGTNDAFLRARALANL 384
               +FQGCWF+NMGF+LW P F+P+GC++ F E   + MHGAVTCG+  A LRA ALANL
Sbjct: 181  ISVVFQGCWFMNMGFMLWFPDFIPEGCVMQFAEASIDDMHGAVTCGSLAAELRATALANL 240

Query: 383  QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRG 264
            QFS ILA I++LT  +CL LA K   R QS EYE++HSRG
Sbjct: 241  QFSWILAGILLLTGCMCLKLARKCTPRSQSTEYEQLHSRG 280


>ref|XP_003541116.1| PREDICTED: transmembrane protein 45B-like [Glycine max]
          Length = 295

 Score =  310 bits (795), Expect = 3e-82
 Identities = 153/281 (54%), Positives = 195/281 (69%), Gaps = 1/281 (0%)
 Frame = -3

Query: 1100 MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 921
            MG+FVGH V G AL LLGLW+T +TI++Y +KG ANF  RFWY FN    + K+      
Sbjct: 1    MGSFVGHAVQGSALALLGLWNTIHTIRSYLVKGPANFTVRFWYQFNTPQSRLKHLELVSI 60

Query: 920  XXXXXXXXXSQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHLPEVFMWFVG 741
                      Q+LDF HF ++F LD+ EHATMF+HLA++AG +L  ELT   ++F  FVG
Sbjct: 61   LSFSVLAIFMQILDFPHFHYAFKLDNFEHATMFIHLALFAGFSLSTELTDSLDLFSGFVG 120

Query: 740  LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 561
            +LA+SVFSQELFLLHFHSTDHVGLEGHYHWLLQLIV+VS V+ALA   FP          
Sbjct: 121  ILASSVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVLVSLVAALAATIFPNNFNAALVLS 180

Query: 560  XXXLFQGCWFLNMGFILWVPRFVPKGCMVSFVE-GGNGMHGAVTCGTNDAFLRARALANL 384
               +FQGCWF+NMGF+LW+P FVP+GC+++  +  G+ + GAVTCG+ +A  RAR LANL
Sbjct: 181  ISVIFQGCWFINMGFMLWIPAFVPEGCVMNLAKASGHEIIGAVTCGSKEADFRARGLANL 240

Query: 383  QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRGA 261
            QFS IL++I+I    +CL LA K       +EYERI ++GA
Sbjct: 241  QFSWILSSILIFAGIICLKLARKCTITTNRLEYERIQTKGA 281


>ref|XP_003606844.1| Transmembrane protein 45B [Medicago truncatula]
            gi|355507899|gb|AES89041.1| Transmembrane protein 45B
            [Medicago truncatula]
          Length = 293

 Score =  304 bits (778), Expect = 3e-80
 Identities = 151/286 (52%), Positives = 193/286 (67%), Gaps = 1/286 (0%)
 Frame = -3

Query: 1100 MGTFVGHMVPGCALILLGLWHTFNTIKAYYLKGKANFHSRFWYPFNDFSFKFKYXXXXXX 921
            M  F+ H+V G AL  LGLWH  NTIK+Y +KG +NF  RFWY FN   FKFK+      
Sbjct: 1    MDLFIAHLVQGLALTFLGLWHIINTIKSYLVKGPSNFTIRFWYHFNTPHFKFKHLELVSI 60

Query: 920  XXXXXXXXXSQVLDFYHFEFSFMLDSLEHATMFLHLAIYAGIALVVELTHLPEVFMWFVG 741
                      Q+LDF HF ++F LD+ EHATMF+HLA++AG +L+ ELT   E+F  FV 
Sbjct: 61   LSFSILAILMQILDFPHFHYAFKLDNFEHATMFIHLALFAGFSLLTELTDSLELFSGFVA 120

Query: 740  LLAASVFSQELFLLHFHSTDHVGLEGHYHWLLQLIVVVSFVSALAMISFPXXXXXXXXXX 561
            +L +SVFSQELFLLHFHSTDHVG EGHYHWLLQLIV VS +++LA   FP          
Sbjct: 121  ILVSSVFSQELFLLHFHSTDHVGPEGHYHWLLQLIVFVSLIASLAAAVFPNSFNAAIVLS 180

Query: 560  XXXLFQGCWFLNMGFILWVPRFVPKGCMVSFV-EGGNGMHGAVTCGTNDAFLRARALANL 384
               +FQGCWF+NMGF+L++P FVP+GC+++   E  + +HGAVTCG+ +A  RA+ LANL
Sbjct: 181  ISLIFQGCWFINMGFMLYIPTFVPEGCVMNLARESASEIHGAVTCGSKEADFRAKGLANL 240

Query: 383  QFSLILAAIMILTSSLCLTLAGKYIARRQSIEYERIHSRGADANQI 246
            QFS IL+AIMI    +CL LA K+      +EYERI S+ AD+  +
Sbjct: 241  QFSWILSAIMIFAGIVCLKLAKKFTI-VDRLEYERIQSKVADSTVV 285


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