BLASTX nr result
ID: Coptis21_contig00017701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00017701
(792 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620... 208 4e-98
ref|XP_002519809.1| nuclear pore complex protein nup93, putative... 205 4e-98
ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|2... 203 1e-93
ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|2... 197 1e-92
ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620... 189 7e-91
>ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620 [Vitis vinifera]
gi|297739625|emb|CBI29807.3| unnamed protein product
[Vitis vinifera]
Length = 863
Score = 208 bits (529), Expect(2) = 4e-98
Identities = 108/136 (79%), Positives = 120/136 (88%), Gaps = 1/136 (0%)
Frame = -1
Query: 792 ATRLLAREGINAEQLARDLKSFEIKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQK 613
ATRLLAREG+NAEQLARDLKSFE+KTTFEDVFPAEATSVEEYLQQVHEMA+VSAIQEAQK
Sbjct: 63 ATRLLAREGLNAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAIVSAIQEAQK 122
Query: 612 DNLRCFNDHMLHVMEEDWQKEKLDFLQSLSRFSMLPRTN-XXXXXXXTRPGQMASMVSSP 436
DNL+ FND+M+ VMEEDWQKEK DFLQSLSR S LP+TN TRPGQ+ASM+SSP
Sbjct: 123 DNLKSFNDYMMKVMEEDWQKEKRDFLQSLSRISTLPKTNISDSSTGATRPGQIASMISSP 182
Query: 435 QVSAGPAGMDLVPLGN 388
QVS+G + M+LVPL N
Sbjct: 183 QVSSGLSSMELVPLAN 198
Score = 177 bits (448), Expect(2) = 4e-98
Identities = 83/113 (73%), Positives = 100/113 (88%)
Frame = -2
Query: 341 VLDQKASVYAGVVRNLNNARERALPFKPATAFKTAYEGLGLSSTGGKSVSMQKIWHLIQT 162
VL++K SVYA VV+NLN+ARER LPFKPATAFK AY+ LGL ++GGKSV+MQKIWHLIQT
Sbjct: 201 VLEKKTSVYAEVVKNLNSARERGLPFKPATAFKGAYDSLGLETSGGKSVNMQKIWHLIQT 260
Query: 161 LVAENSVNPRNISRKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGN 3
L+ E++ N+S+KMSL+IGARRHLEWGHEK+++DTIQSHP QAALGG VGN
Sbjct: 261 LMGEDTAAQWNVSKKMSLVIGARRHLEWGHEKYMIDTIQSHPAQAALGGVVGN 313
>ref|XP_002519809.1| nuclear pore complex protein nup93, putative [Ricinus communis]
gi|223541048|gb|EEF42605.1| nuclear pore complex protein
nup93, putative [Ricinus communis]
Length = 710
Score = 205 bits (522), Expect(2) = 4e-98
Identities = 108/136 (79%), Positives = 117/136 (86%), Gaps = 1/136 (0%)
Frame = -1
Query: 792 ATRLLAREGINAEQLARDLKSFEIKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQK 613
ATRLLAREGINAEQLARDLKSFE+KT FEDVFPAEAT+VEEYLQQVHEMAMVSAIQEAQK
Sbjct: 32 ATRLLAREGINAEQLARDLKSFELKTVFEDVFPAEATTVEEYLQQVHEMAMVSAIQEAQK 91
Query: 612 DNLRCFNDHMLHVMEEDWQKEKLDFLQSLSRFSMLPRTN-XXXXXXXTRPGQMASMVSSP 436
D+LR FND+ML V+EEDWQKEK DFLQSLSR S LPRTN TR GQ+AS+ SSP
Sbjct: 92 DSLRSFNDYMLKVLEEDWQKEKRDFLQSLSRISALPRTNAIETSSGGTRSGQIASVASSP 151
Query: 435 QVSAGPAGMDLVPLGN 388
Q S+GP GM+LVPL N
Sbjct: 152 QASSGPIGMELVPLAN 167
Score = 179 bits (455), Expect(2) = 4e-98
Identities = 85/113 (75%), Positives = 99/113 (87%)
Frame = -2
Query: 341 VLDQKASVYAGVVRNLNNARERALPFKPATAFKTAYEGLGLSSTGGKSVSMQKIWHLIQT 162
+L++KAS YA VV+NLNNARE L FKPATAFK AY+ LG ++GGKSV+MQK+WHLIQT
Sbjct: 170 ILEKKASAYAEVVKNLNNAREHGLQFKPATAFKNAYDSLGHEASGGKSVNMQKMWHLIQT 229
Query: 161 LVAENSVNPRNISRKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGN 3
L+ ENS RN+SRKMSL+IGARRHLEWGHEK+I+DTIQSHP QAALGGAVGN
Sbjct: 230 LMGENSTFQRNLSRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGAVGN 282
>ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|222870627|gb|EEF07758.1|
predicted protein [Populus trichocarpa]
Length = 863
Score = 203 bits (516), Expect(2) = 1e-93
Identities = 104/136 (76%), Positives = 116/136 (85%), Gaps = 1/136 (0%)
Frame = -1
Query: 792 ATRLLAREGINAEQLARDLKSFEIKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQK 613
ATRLLAREGINAE LARDLKSFE+KTTFEDVFPAEATSVEEYLQQ HEMAMVSAIQEAQK
Sbjct: 63 ATRLLAREGINAEHLARDLKSFELKTTFEDVFPAEATSVEEYLQQFHEMAMVSAIQEAQK 122
Query: 612 DNLRCFNDHMLHVMEEDWQKEKLDFLQSLSRFSMLPRTN-XXXXXXXTRPGQMASMVSSP 436
DN+R FND+M+ V+EEDWQKE+ DFLQSLSR S LPRTN TR GQ+AS+ SSP
Sbjct: 123 DNVRSFNDYMMRVLEEDWQKERCDFLQSLSRISSLPRTNIVDSSTEGTRSGQLASLASSP 182
Query: 435 QVSAGPAGMDLVPLGN 388
S+GP+GM++VPL N
Sbjct: 183 HASSGPSGMEIVPLAN 198
Score = 167 bits (422), Expect(2) = 1e-93
Identities = 80/113 (70%), Positives = 95/113 (84%)
Frame = -2
Query: 341 VLDQKASVYAGVVRNLNNARERALPFKPATAFKTAYEGLGLSSTGGKSVSMQKIWHLIQT 162
+L++KAS A VV+NLN+ARE FKPATAFK AYE LG+ +GGKSV+MQKIWHL+QT
Sbjct: 201 ILEKKASACAEVVKNLNHAREHGSQFKPATAFKGAYESLGVEVSGGKSVNMQKIWHLVQT 260
Query: 161 LVAENSVNPRNISRKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGN 3
LV EN+ +SRKMSL+IGARRHLEWGHEK+I+DTIQ+HP QAALGGAVGN
Sbjct: 261 LVGENTTMQPIVSRKMSLVIGARRHLEWGHEKYIMDTIQNHPAQAALGGAVGN 313
>ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|222858408|gb|EEE95955.1|
predicted protein [Populus trichocarpa]
Length = 863
Score = 197 bits (500), Expect(2) = 1e-92
Identities = 103/136 (75%), Positives = 116/136 (85%), Gaps = 1/136 (0%)
Frame = -1
Query: 792 ATRLLAREGINAEQLARDLKSFEIKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQK 613
ATRLLAREGINAEQLARDLKSFE+KTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQK
Sbjct: 63 ATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQK 122
Query: 612 DNLRCFNDHMLHVMEEDWQKEKLDFLQSLSRFSMLPRTN-XXXXXXXTRPGQMASMVSSP 436
DN+R FND+M+ V+EEDWQKE+ DFLQSLSR S LP+TN TR Q+AS+ SSP
Sbjct: 123 DNVRSFNDYMMKVLEEDWQKERRDFLQSLSRISSLPKTNLADTSTGVTRSRQIASLASSP 182
Query: 435 QVSAGPAGMDLVPLGN 388
VS+G +GM+ +PL N
Sbjct: 183 HVSSGSSGMENLPLAN 198
Score = 169 bits (429), Expect(2) = 1e-92
Identities = 81/114 (71%), Positives = 95/114 (83%)
Frame = -2
Query: 344 SVLDQKASVYAGVVRNLNNARERALPFKPATAFKTAYEGLGLSSTGGKSVSMQKIWHLIQ 165
S +++KAS YA V+NLN ARE FKPATAFK AYE LG +GGKSV+MQKIWHL+Q
Sbjct: 200 SFVEKKASAYAEAVKNLNRAREHGSQFKPATAFKGAYESLGAEVSGGKSVNMQKIWHLVQ 259
Query: 164 TLVAENSVNPRNISRKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGN 3
TLV EN+ ++ISRKMSL+IGARRHLEWGHEK+I+DTIQ+HP QAALGGAVGN
Sbjct: 260 TLVGENTTMKQSISRKMSLVIGARRHLEWGHEKYIMDTIQNHPAQAALGGAVGN 313
>ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus]
gi|449494745|ref|XP_004159635.1| PREDICTED:
uncharacterized protein At2g41620-like [Cucumis sativus]
Length = 863
Score = 189 bits (481), Expect(2) = 7e-91
Identities = 98/136 (72%), Positives = 113/136 (83%), Gaps = 1/136 (0%)
Frame = -1
Query: 792 ATRLLAREGINAEQLARDLKSFEIKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQK 613
ATRLLAREGINAEQLARDLKSFE+KTTFEDVFPAEATS+EEYLQQVHEMAM+SAIQEAQK
Sbjct: 63 ATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSIEEYLQQVHEMAMISAIQEAQK 122
Query: 612 DNLRCFNDHMLHVMEEDWQKEKLDFLQSLSRFSMLPRTN-XXXXXXXTRPGQMASMVSSP 436
DN+R FND+M+ V+EEDW+KEK DFLQSLSR S LPRTN ++ GQ++S VSS
Sbjct: 123 DNVRSFNDYMMRVLEEDWKKEKRDFLQSLSRISTLPRTNMIDDKSGASKTGQISSFVSSA 182
Query: 435 QVSAGPAGMDLVPLGN 388
VS+G ++ V L N
Sbjct: 183 HVSSGVPSLESVSLAN 198
Score = 171 bits (433), Expect(2) = 7e-91
Identities = 80/113 (70%), Positives = 96/113 (84%)
Frame = -2
Query: 341 VLDQKASVYAGVVRNLNNARERALPFKPATAFKTAYEGLGLSSTGGKSVSMQKIWHLIQT 162
++++KAS Y VV+ +N+ARER LPFKPA AFK AYE L L ++ GKSV+MQKIWHLIQT
Sbjct: 201 IIEKKASTYGEVVKKMNDARERGLPFKPAVAFKGAYESLDLHASAGKSVNMQKIWHLIQT 260
Query: 161 LVAENSVNPRNISRKMSLIIGARRHLEWGHEKHILDTIQSHPVQAALGGAVGN 3
L+ E S + RNIS+KMSLI+GARRHLEWGHEK+I+DTIQSHP QAALGG VGN
Sbjct: 261 LMGEESTSKRNISKKMSLILGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGN 313