BLASTX nr result

ID: Coptis21_contig00017696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017696
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14986.3| unnamed protein product [Vitis vinifera]              225   3e-57
ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-...   225   3e-57
ref|XP_002511357.1| transcription factor, putative [Ricinus comm...   215   3e-54
ref|XP_004155086.1| PREDICTED: jmjC domain-containing protein 4-...   210   1e-52
ref|XP_004138273.1| PREDICTED: jmjC domain-containing protein 4-...   210   1e-52

>emb|CBI14986.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  225 bits (574), Expect = 3e-57
 Identities = 101/147 (68%), Positives = 119/147 (80%), Gaps = 13/147 (8%)
 Frame = -2

Query: 404 DDWKACKDWVTSDGKPNLHFFSTHFGKSLVQVAECNSRELTEQKRVEMSVADFIKNWL-- 231
           D W+ACKDWVT  G+PNL FFSTHFGKS+VQVA+C +RE T+QKR+EMSVA+FI +WL  
Sbjct: 40  DGWRACKDWVTHTGQPNLEFFSTHFGKSIVQVADCGTREFTDQKRMEMSVAEFIDHWLKD 99

Query: 230 -----------DNDESLLYLKDWHFVKEYPEYIAYTTPLFFRDDWLNLYLNSYHMHTDTD 84
                      ++ + L+YLKDWHFVKEYPEY+AYTTPLFFRDDWLNLYL++Y MH + D
Sbjct: 100 SANYHVNATTNEHGKPLVYLKDWHFVKEYPEYLAYTTPLFFRDDWLNLYLDNYSMHNEPD 159

Query: 83  TYREKNEISCSDYRFVYMGTKGTWTPL 3
             +EKNEISCSDYRFVYMG KGTWTPL
Sbjct: 160 ACQEKNEISCSDYRFVYMGAKGTWTPL 186


>ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-like [Vitis vinifera]
          Length = 493

 Score =  225 bits (574), Expect = 3e-57
 Identities = 101/147 (68%), Positives = 119/147 (80%), Gaps = 13/147 (8%)
 Frame = -2

Query: 404 DDWKACKDWVTSDGKPNLHFFSTHFGKSLVQVAECNSRELTEQKRVEMSVADFIKNWL-- 231
           D W+ACKDWVT  G+PNL FFSTHFGKS+VQVA+C +RE T+QKR+EMSVA+FI +WL  
Sbjct: 40  DGWRACKDWVTHTGQPNLEFFSTHFGKSIVQVADCGTREFTDQKRMEMSVAEFIDHWLKD 99

Query: 230 -----------DNDESLLYLKDWHFVKEYPEYIAYTTPLFFRDDWLNLYLNSYHMHTDTD 84
                      ++ + L+YLKDWHFVKEYPEY+AYTTPLFFRDDWLNLYL++Y MH + D
Sbjct: 100 SANYHVNATTNEHGKPLVYLKDWHFVKEYPEYLAYTTPLFFRDDWLNLYLDNYSMHNEPD 159

Query: 83  TYREKNEISCSDYRFVYMGTKGTWTPL 3
             +EKNEISCSDYRFVYMG KGTWTPL
Sbjct: 160 ACQEKNEISCSDYRFVYMGAKGTWTPL 186


>ref|XP_002511357.1| transcription factor, putative [Ricinus communis]
           gi|223550472|gb|EEF51959.1| transcription factor,
           putative [Ricinus communis]
          Length = 462

 Score =  215 bits (548), Expect = 3e-54
 Identities = 97/142 (68%), Positives = 114/142 (80%), Gaps = 8/142 (5%)
 Frame = -2

Query: 404 DDWKACKDWVTSDGKPNLHFFSTHFGKSLVQVAECNSRELTEQKRVEMSVADFIKNWLD- 228
           D+W+ACKDWVT DG PNL FFSTHFGKS VQVA+C +RE T+QKRVEM+V++FI +W++ 
Sbjct: 40  DNWRACKDWVTDDGYPNLQFFSTHFGKSRVQVADCGTREFTDQKRVEMTVSEFIDHWIEY 99

Query: 227 -------NDESLLYLKDWHFVKEYPEYIAYTTPLFFRDDWLNLYLNSYHMHTDTDTYREK 69
                  N +SLLYLKDWHFVKEYPEY+AY TPL F DDWLN YL+ Y MH + DTY+E 
Sbjct: 100 NASNHESNSKSLLYLKDWHFVKEYPEYVAYRTPLPFCDDWLNPYLDHYRMHRNPDTYQEN 159

Query: 68  NEISCSDYRFVYMGTKGTWTPL 3
           NEI  SDYRFVYMG KG+WTPL
Sbjct: 160 NEICSSDYRFVYMGAKGSWTPL 181


>ref|XP_004155086.1| PREDICTED: jmjC domain-containing protein 4-like [Cucumis sativus]
          Length = 480

 Score =  210 bits (534), Expect = 1e-52
 Identities = 96/148 (64%), Positives = 113/148 (76%), Gaps = 14/148 (9%)
 Frame = -2

Query: 404 DDWKACKDWVTSDGKPNLHFFSTHFGKSLVQVAECNSRELTEQKRVEMSVADFIKNWLDN 225
           DDWKAC DWV  +G+PNL FFSTHFGKS VQVA+C+++E T+QKRVEMSV++FI  W   
Sbjct: 40  DDWKACSDWVDENGQPNLSFFSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKE 99

Query: 224 --------------DESLLYLKDWHFVKEYPEYIAYTTPLFFRDDWLNLYLNSYHMHTDT 87
                         D+S+LYLKDWHFVKEY  Y AY+TP F  DDWLNLYL+SY MH D 
Sbjct: 100 PIQEHGLSSNNGLTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDP 159

Query: 86  DTYREKNEISCSDYRFVYMGTKGTWTPL 3
           D+Y+EK+EISCSDYRFVYMG KG+WTPL
Sbjct: 160 DSYQEKDEISCSDYRFVYMGAKGSWTPL 187


>ref|XP_004138273.1| PREDICTED: jmjC domain-containing protein 4-like [Cucumis sativus]
          Length = 480

 Score =  210 bits (534), Expect = 1e-52
 Identities = 96/148 (64%), Positives = 113/148 (76%), Gaps = 14/148 (9%)
 Frame = -2

Query: 404 DDWKACKDWVTSDGKPNLHFFSTHFGKSLVQVAECNSRELTEQKRVEMSVADFIKNWLDN 225
           DDWKAC DWV  +G+PNL FFSTHFGKS VQVA+C+++E T+QKRVEMSV++FI  W   
Sbjct: 40  DDWKACSDWVDENGQPNLSFFSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKE 99

Query: 224 --------------DESLLYLKDWHFVKEYPEYIAYTTPLFFRDDWLNLYLNSYHMHTDT 87
                         D+S+LYLKDWHFVKEY  Y AY+TP F  DDWLNLYL+SY MH D 
Sbjct: 100 PIQEHGLSSNNGLTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDP 159

Query: 86  DTYREKNEISCSDYRFVYMGTKGTWTPL 3
           D+Y+EK+EISCSDYRFVYMG KG+WTPL
Sbjct: 160 DSYQEKDEISCSDYRFVYMGAKGSWTPL 187


Top