BLASTX nr result

ID: Coptis21_contig00017685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017685
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279765.1| PREDICTED: uncharacterized protein LOC100255...   390   e-106
ref|XP_002526403.1| conserved hypothetical protein [Ricinus comm...   378   e-103
ref|XP_002325525.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
gb|ABK93991.1| unknown [Populus trichocarpa]                          374   e-101
ref|XP_003598051.1| hypothetical protein MTR_3g005710 [Medicago ...   370   e-100

>ref|XP_002279765.1| PREDICTED: uncharacterized protein LOC100255018 [Vitis vinifera]
           gi|296090589|emb|CBI40958.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  390 bits (1001), Expect = e-106
 Identities = 184/251 (73%), Positives = 214/251 (85%), Gaps = 8/251 (3%)
 Frame = -1

Query: 850 NPTATVEAASCPPS--------TQTCTKIPPSIVQAIIHYSTSSITPQQTLSEISVTSQV 695
           N T+T  A   PPS        T TCTK PPS+ QA++HY+T +ITPQQT +EISV+ +V
Sbjct: 51  NSTSTPAAEEQPPSRDCPSLPLTPTCTKTPPSLAQALVHYATLNITPQQTFNEISVSLRV 110

Query: 694 LQKKSPCNFLVFGLGHDSLMWASLNHGGRTVFLEEDKSWIEQIRYGFPTLESYHIVYDSK 515
           LQKK+PCNFLVFGLGHDSLMW +LNHGGRT+FLEEDKSWIEQI+   P+LESYH+VYDSK
Sbjct: 111 LQKKAPCNFLVFGLGHDSLMWTALNHGGRTIFLEEDKSWIEQIKQKLPSLESYHVVYDSK 170

Query: 514 VHQADELMKIGKGEECKVVTDPRSSRCQLALKTIPNEVYEIEWDLIMVDAPTGFHENAPG 335
           VHQADELM++G GE+CKVV DPR S+C+L+LK  PNEVY++EWDLIMVDAPTG+H+ APG
Sbjct: 171 VHQADELMEVGMGEDCKVVVDPRFSKCKLSLKGFPNEVYDVEWDLIMVDAPTGYHDEAPG 230

Query: 334 RMSAIYTAGMIARNKEDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPSH 155
           RMSAIYTAG++ARN+EDGETDVFVHDVDR+VEDKFSKAFLCE Y R QEGR+RHFTIPSH
Sbjct: 231 RMSAIYTAGLMARNREDGETDVFVHDVDRVVEDKFSKAFLCEGYFREQEGRIRHFTIPSH 290

Query: 154 RGTSGNRPFCP 122
           R  SG R FCP
Sbjct: 291 RTRSG-RSFCP 300


>ref|XP_002526403.1| conserved hypothetical protein [Ricinus communis]
           gi|223534265|gb|EEF35979.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  378 bits (971), Expect = e-103
 Identities = 177/241 (73%), Positives = 207/241 (85%)
 Frame = -1

Query: 844 TATVEAASCPPSTQTCTKIPPSIVQAIIHYSTSSITPQQTLSEISVTSQVLQKKSPCNFL 665
           +++  A SCP    TCTK PPS+  A++HY T++ITPQQTL EISVT +VL+KKSPCNFL
Sbjct: 62  SSSTAAPSCPSIPLTCTKTPPSLANALVHYVTTNITPQQTLKEISVTLRVLEKKSPCNFL 121

Query: 664 VFGLGHDSLMWASLNHGGRTVFLEEDKSWIEQIRYGFPTLESYHIVYDSKVHQADELMKI 485
           VFGLGHDSLMW SLNHGGRTVFLEEDKSWIEQI+   P+LESYH+ Y++KVHQAD LM+ 
Sbjct: 122 VFGLGHDSLMWTSLNHGGRTVFLEEDKSWIEQIKAKQPSLESYHVTYETKVHQADGLMET 181

Query: 484 GKGEECKVVTDPRSSRCQLALKTIPNEVYEIEWDLIMVDAPTGFHENAPGRMSAIYTAGM 305
           G GEECK V+DPR S CQLALK+ P++VY+ EWDLIMVDAPTG+H+ APGRM+AIYTAG+
Sbjct: 182 GMGEECKAVSDPRLSSCQLALKSFPSDVYDTEWDLIMVDAPTGYHDEAPGRMTAIYTAGL 241

Query: 304 IARNKEDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPSHRGTSGNRPFC 125
           +ARN+E+GETDVFVHDVDR+VEDKFSKAFLCE Y+  QEGRLRHFTIPSHR   G RPFC
Sbjct: 242 MARNRENGETDVFVHDVDRVVEDKFSKAFLCEGYLVEQEGRLRHFTIPSHRARLG-RPFC 300

Query: 124 P 122
           P
Sbjct: 301 P 301


>ref|XP_002325525.1| predicted protein [Populus trichocarpa] gi|222862400|gb|EEE99906.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  376 bits (965), Expect = e-102
 Identities = 175/235 (74%), Positives = 204/235 (86%), Gaps = 2/235 (0%)
 Frame = -1

Query: 820 CP--PSTQTCTKIPPSIVQAIIHYSTSSITPQQTLSEISVTSQVLQKKSPCNFLVFGLGH 647
           CP  P T TCTKIPPS+  A++HY T++ITPQQTL EISV+ +VL+KKSPCNFLVFGLGH
Sbjct: 1   CPSLPLTPTCTKIPPSLANALVHYVTTNITPQQTLKEISVSLRVLEKKSPCNFLVFGLGH 60

Query: 646 DSLMWASLNHGGRTVFLEEDKSWIEQIRYGFPTLESYHIVYDSKVHQADELMKIGKGEEC 467
           DSLMW SLNHGGRTVFLEEDK+WIEQIR   PTLESYH+ YD++VHQAD LM+ G G+EC
Sbjct: 61  DSLMWTSLNHGGRTVFLEEDKAWIEQIREKLPTLESYHVTYDTRVHQADGLMETGMGDEC 120

Query: 466 KVVTDPRSSRCQLALKTIPNEVYEIEWDLIMVDAPTGFHENAPGRMSAIYTAGMIARNKE 287
           KVV DPR S+CQLALK  P ++Y++EWDLIMVDAPTG+H+ APGRM+AIYTAG++ARN+E
Sbjct: 121 KVVGDPRFSKCQLALKGFPGDIYDVEWDLIMVDAPTGYHDEAPGRMNAIYTAGLMARNRE 180

Query: 286 DGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPSHRGTSGNRPFCP 122
           +G TDVFVHDVDR+VEDKFSKAFLCE YM  QEGRLRHF IP+HR TS  +PFCP
Sbjct: 181 NGVTDVFVHDVDRVVEDKFSKAFLCEGYMTEQEGRLRHFIIPTHR-TSSGKPFCP 234


>gb|ABK93991.1| unknown [Populus trichocarpa]
          Length = 304

 Score =  374 bits (959), Expect = e-101
 Identities = 173/236 (73%), Positives = 206/236 (87%), Gaps = 2/236 (0%)
 Frame = -1

Query: 823 SCP--PSTQTCTKIPPSIVQAIIHYSTSSITPQQTLSEISVTSQVLQKKSPCNFLVFGLG 650
           +CP  P T TCTK PPS+  A++HY T++ITPQQTL EISVT +VL+KKSPCNFLVFGLG
Sbjct: 70  ACPSLPLTPTCTKTPPSLANALVHYVTTNITPQQTLKEISVTLRVLEKKSPCNFLVFGLG 129

Query: 649 HDSLMWASLNHGGRTVFLEEDKSWIEQIRYGFPTLESYHIVYDSKVHQADELMKIGKGEE 470
           HDSLMW SLNHGGRTVFLEEDK+WIEQI    P+LE+YH+ YD++VHQAD LM+ G G+E
Sbjct: 130 HDSLMWTSLNHGGRTVFLEEDKAWIEQITEKLPSLEAYHVTYDTRVHQADGLMETGMGDE 189

Query: 469 CKVVTDPRSSRCQLALKTIPNEVYEIEWDLIMVDAPTGFHENAPGRMSAIYTAGMIARNK 290
           CKVV+DPR S+CQL+LK  P+++Y++EWDLIMVDAPTG+H+ APGRM+AIYTAG++ARN+
Sbjct: 190 CKVVSDPRFSKCQLSLKGFPSDIYDMEWDLIMVDAPTGYHDEAPGRMTAIYTAGLMARNR 249

Query: 289 EDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPSHRGTSGNRPFCP 122
           E+GETDVFVHDVDR+VEDKFSKAFLCE Y+  QEGRLRHF IPSHR  SG RPFCP
Sbjct: 250 ENGETDVFVHDVDRVVEDKFSKAFLCEGYLTEQEGRLRHFIIPSHRTRSG-RPFCP 304


>ref|XP_003598051.1| hypothetical protein MTR_3g005710 [Medicago truncatula]
           gi|355487099|gb|AES68302.1| hypothetical protein
           MTR_3g005710 [Medicago truncatula]
           gi|388503858|gb|AFK39995.1| unknown [Medicago
           truncatula]
          Length = 298

 Score =  370 bits (949), Expect = e-100
 Identities = 175/244 (71%), Positives = 209/244 (85%), Gaps = 3/244 (1%)
 Frame = -1

Query: 844 TATVEAASCP--PSTQTCTKIPPSIVQAIIHYSTSSITPQQTLSEISVTSQVLQKKSPCN 671
           T     + CP  P T TCTK PPS+  A+IHY+T+ ITPQQT+ EISV+++VLQKKSPCN
Sbjct: 56  TEKTTKSECPSLPITPTCTKNPPSLANALIHYATTKITPQQTIQEISVSAKVLQKKSPCN 115

Query: 670 FLVFGLGHDSLMWASLNHGGRTVFLEEDKSWIEQIRYGFPTLESYHIVYDSKVHQADELM 491
           FLVFGLGHDSLMW SLN+GGRTVFLEEDK+WIEQI+  FPTLESYH+VYD+KVHQ+DELM
Sbjct: 116 FLVFGLGHDSLMWTSLNYGGRTVFLEEDKTWIEQIQSKFPTLESYHVVYDTKVHQSDELM 175

Query: 490 KIG-KGEECKVVTDPRSSRCQLALKTIPNEVYEIEWDLIMVDAPTGFHENAPGRMSAIYT 314
           KIG + E+CK V+DPR S+C LALK  P+E+Y++EWD+IMVDAPTG+ + APGRMSAIYT
Sbjct: 176 KIGMEQEDCKKVSDPRFSKCGLALKGFPSEIYDVEWDVIMVDAPTGYFDGAPGRMSAIYT 235

Query: 313 AGMIARNKEDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPSHRGTSGNR 134
           AG+IARN+E+G+TDVFVHDVDR VED+FSKAFLCE Y+R QEGR+RHF IPSHR   G R
Sbjct: 236 AGLIARNRENGDTDVFVHDVDRKVEDQFSKAFLCEGYLREQEGRIRHFNIPSHRARLG-R 294

Query: 133 PFCP 122
           P+CP
Sbjct: 295 PYCP 298


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