BLASTX nr result

ID: Coptis21_contig00017669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017669
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62994.1| hypothetical protein VITISV_021619 [Vitis vinifera]   242   3e-62
ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D...   241   3e-62
ref|XP_002892121.1| hypothetical protein ARALYDRAFT_887416 [Arab...   237   6e-61
emb|CBI36913.3| unnamed protein product [Vitis vinifera]              236   1e-60
ref|NP_171773.1| 1,4-beta-D-xylan synthase [Arabidopsis thaliana...   236   1e-60

>emb|CAN62994.1| hypothetical protein VITISV_021619 [Vitis vinifera]
          Length = 409

 Score =  242 bits (617), Expect = 3e-62
 Identities = 113/125 (90%), Positives = 121/125 (96%)
 Frame = +3

Query: 3   TLTSKSATPEEGDDEFADLYLVKWSFLMVTPITIMMVNMIAIAVGVSRTMYSTFPQWSKL 182
           TLTSKSATPE+GDDEFA+LY+VKWSFLMV PITIMM+NMIAIAVGV+RT+YSTFPQWSKL
Sbjct: 285 TLTSKSATPEDGDDEFAELYVVKWSFLMVPPITIMMINMIAIAVGVARTLYSTFPQWSKL 344

Query: 183 VGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIVFVWSGLLSIVISLLWVYISPPSGRQDYM 362
           VGGVFFSFWVLCHLYPFAKGLMGRR +VPTIVFVWSGLLSI+ISLLWVYISPPSGRQDYM
Sbjct: 345 VGGVFFSFWVLCHLYPFAKGLMGRRXRVPTIVFVWSGLLSIIISLLWVYISPPSGRQDYM 404

Query: 363 TFSFP 377
            F FP
Sbjct: 405 KFQFP 409


>ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera]
          Length = 1171

 Score =  241 bits (616), Expect = 3e-62
 Identities = 113/125 (90%), Positives = 121/125 (96%)
 Frame = +3

Query: 3    TLTSKSATPEEGDDEFADLYLVKWSFLMVTPITIMMVNMIAIAVGVSRTMYSTFPQWSKL 182
            TLTSKSATPE+GDDEFA+LY+VKWSFLMV PITIMM+NMIAIAVGV+RT+YSTFPQWSKL
Sbjct: 1047 TLTSKSATPEDGDDEFAELYVVKWSFLMVPPITIMMINMIAIAVGVARTLYSTFPQWSKL 1106

Query: 183  VGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIVFVWSGLLSIVISLLWVYISPPSGRQDYM 362
            VGGVFFSFWVLCHLYPFAKGLMGRR +VPTIVFVWSGLLSI+ISLLWVYISPPSGRQDYM
Sbjct: 1107 VGGVFFSFWVLCHLYPFAKGLMGRRRRVPTIVFVWSGLLSIIISLLWVYISPPSGRQDYM 1166

Query: 363  TFSFP 377
             F FP
Sbjct: 1167 KFQFP 1171


>ref|XP_002892121.1| hypothetical protein ARALYDRAFT_887416 [Arabidopsis lyrata subsp.
            lyrata] gi|297337963|gb|EFH68380.1| hypothetical protein
            ARALYDRAFT_887416 [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  237 bits (605), Expect = 6e-61
 Identities = 109/125 (87%), Positives = 120/125 (96%)
 Frame = +3

Query: 3    TLTSKSATPEEGDDEFADLYLVKWSFLMVTPITIMMVNMIAIAVGVSRTMYSTFPQWSKL 182
            TLTSKS+TPEEG+DEFADLY VKWSFLMV P+TIMMVNMIAIAVG++RT+YS FPQWSKL
Sbjct: 1060 TLTSKSSTPEEGEDEFADLYAVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKL 1119

Query: 183  VGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIVFVWSGLLSIVISLLWVYISPPSGRQDYM 362
            VGGVFFSFWVLCHLYPFAKGLMGRRG+VPTIVFVWSGLLSI++SLLWVYI+PPSG+QDYM
Sbjct: 1120 VGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQDYM 1179

Query: 363  TFSFP 377
             F FP
Sbjct: 1180 QFQFP 1184


>emb|CBI36913.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  236 bits (603), Expect = 1e-60
 Identities = 111/122 (90%), Positives = 119/122 (97%)
 Frame = +3

Query: 3    TLTSKSATPEEGDDEFADLYLVKWSFLMVTPITIMMVNMIAIAVGVSRTMYSTFPQWSKL 182
            TLTSKSATPE+GDDEFA+LY+VKWSFLMV PITIMM+NMIAIAVGV+RT+YSTFPQWSKL
Sbjct: 707  TLTSKSATPEDGDDEFAELYVVKWSFLMVPPITIMMINMIAIAVGVARTLYSTFPQWSKL 766

Query: 183  VGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIVFVWSGLLSIVISLLWVYISPPSGRQDYM 362
            VGGVFFSFWVLCHLYPFAKGLMGRR +VPTIVFVWSGLLSI+ISLLWVYISPPSGRQDYM
Sbjct: 767  VGGVFFSFWVLCHLYPFAKGLMGRRRRVPTIVFVWSGLLSIIISLLWVYISPPSGRQDYM 826

Query: 363  TF 368
             F
Sbjct: 827  KF 828


>ref|NP_171773.1| 1,4-beta-D-xylan synthase [Arabidopsis thaliana]
            gi|75207418|sp|Q9SRW9.1|CSLD5_ARATH RecName:
            Full=Cellulose synthase-like protein D5; Short=AtCslD5
            gi|6056428|gb|AAF02892.1|AC009525_26 Very similar to
            cellulose synthase catalytic subunit [Arabidopsis
            thaliana] gi|332189343|gb|AEE27464.1| 1,4-beta-D-xylan
            synthase [Arabidopsis thaliana]
          Length = 1181

 Score =  236 bits (603), Expect = 1e-60
 Identities = 108/125 (86%), Positives = 120/125 (96%)
 Frame = +3

Query: 3    TLTSKSATPEEGDDEFADLYLVKWSFLMVTPITIMMVNMIAIAVGVSRTMYSTFPQWSKL 182
            TLTSKS+ PE+GDDEFADLY+VKWSFLMV P+TIMMVNMIAIAVG++RT+YS FPQWSKL
Sbjct: 1057 TLTSKSSAPEDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKL 1116

Query: 183  VGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIVFVWSGLLSIVISLLWVYISPPSGRQDYM 362
            VGGVFFSFWVLCHLYPFAKGLMGRRG+VPTIVFVWSGLLSI++SLLWVYI+PPSG+QDYM
Sbjct: 1117 VGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQDYM 1176

Query: 363  TFSFP 377
             F FP
Sbjct: 1177 QFQFP 1181


Top