BLASTX nr result

ID: Coptis21_contig00017662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017662
         (1691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vi...   487   e-135
ref|XP_004149809.1| PREDICTED: N-glycosylase/DNA lyase-like [Cuc...   461   e-127
ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Rici...   449   e-124
ref|XP_004171524.1| PREDICTED: N-glycosylase/DNA lyase-like, par...   447   e-123
ref|XP_002890455.1| 8-oxoguanine-DNA glycosylase 1 [Arabidopsis ...   437   e-120

>ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vinifera]
          Length = 399

 Score =  487 bits (1254), Expect = e-135
 Identities = 256/369 (69%), Positives = 289/369 (78%), Gaps = 9/369 (2%)
 Frame = +3

Query: 24   MKRQR-------TPTTKTPLIT--SNPKPPHLKNTKPISITCSFKQTKTRTLIPKTPCSS 176
            MKR+R       TP T T L T  SN KP    + KP+ +  +      +T  P TP S 
Sbjct: 10   MKRRRPIPQPPSTPPTPTLLKTLVSNSKPTSNSSKKPMILIKT-----PQTPPPTTPISP 64

Query: 177  ETITWQPLNISRTELYLPLTFPTGQTFRWKQTGVYQYTGVIKSHLVSLKQLDNGDGDIAF 356
            +   W PLNI+++EL L LTFPTGQTFRWKQT   QYTGVI SHL+SLK L NGD  +A+
Sbjct: 65   K---WVPLNIAKSELSLALTFPTGQTFRWKQTTPLQYTGVIGSHLISLKHLQNGD--VAY 119

Query: 357  YVHRSNHECNVKEALNDYLNVGISLREMWEAFSACDLRFKDVALRLGGARVLRQDPFECL 536
             +H+S  E N + AL D+LNVGISL EMWE F A D RF ++A  LGGARVLRQDP ECL
Sbjct: 120  LIHQSPSEENARSALLDFLNVGISLSEMWEVFKASDSRFAELAQYLGGARVLRQDPLECL 179

Query: 537  VQFLCSSNNNIGRITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAAGFGY 716
            +QFLCSSNNNIGRIT MVDF+SSLG YLGSV GFDF+EFPSL+RLS+VSE +FR AGFGY
Sbjct: 180  IQFLCSSNNNIGRITKMVDFVSSLGNYLGSVGGFDFYEFPSLDRLSMVSEEDFREAGFGY 239

Query: 717  RAKYIVGTVKSLQSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFSLDQH 896
            RAKYI+GTVK+LQSK GGG EWLASLR +DL EVV+AL TLPGVGPKVAACIALFSLDQH
Sbjct: 240  RAKYIIGTVKALQSKSGGGIEWLASLREMDLQEVVDALSTLPGVGPKVAACIALFSLDQH 299

Query: 897  HAIPVDTHVWQIATRYLIPELANTRLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIAELPL 1076
            HAIPVDTHVWQIATRYLIPELA  RLTPKLC RVA+AFVSK+GKYAGWAQT+LFIAELP 
Sbjct: 300  HAIPVDTHVWQIATRYLIPELAGARLTPKLCSRVADAFVSKYGKYAGWAQTLLFIAELPS 359

Query: 1077 QKALLQPTF 1103
            QK +L P F
Sbjct: 360  QKTILPPKF 368


>ref|XP_004149809.1| PREDICTED: N-glycosylase/DNA lyase-like [Cucumis sativus]
          Length = 393

 Score =  461 bits (1185), Expect = e-127
 Identities = 230/359 (64%), Positives = 271/359 (75%), Gaps = 2/359 (0%)
 Frame = +3

Query: 39   TPTTKTPLITSNPKPPHLKNTKPISITCSFKQTKTRTLIP--KTPCSSETITWQPLNISR 212
            TP+TK      +P  P L ++KP +++           +P  K+P S  +  W  LN++R
Sbjct: 12   TPSTKPSPPPPSPPTPQLSHSKPTTVSLHHSSKNPNKTLPLLKSPQSPSSSNWVSLNLTR 71

Query: 213  TELYLPLTFPTGQTFRWKQTGVYQYTGVIKSHLVSLKQLDNGDGDIAFYVHRSNHECNVK 392
            ++L LPLTFPTGQTFRWKQT  +++TGV+ SHL+SL  L NGD     +   ++     +
Sbjct: 72   SDLSLPLTFPTGQTFRWKQTNPFEFTGVVGSHLISLNHLPNGDVSYCLHFSSTSSSAAAR 131

Query: 393  EALNDYLNVGISLREMWEAFSACDLRFKDVALRLGGARVLRQDPFECLVQFLCSSNNNIG 572
             AL D+LN  ISL  +WE FSA D RF  +A    GARVLRQDP ECL+QFLCSSNNNIG
Sbjct: 132  LALLDFLNASISLSSIWEVFSAADPRFDALARHFEGARVLRQDPLECLIQFLCSSNNNIG 191

Query: 573  RITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAAGFGYRAKYIVGTVKSL 752
            RIT MVD+ISSLG YLG+V GFDF+EFPSLERLSLVSE E R AGFGYRAKYI+G V +L
Sbjct: 192  RITKMVDYISSLGNYLGNVGGFDFYEFPSLERLSLVSEAELREAGFGYRAKYIIGAVNAL 251

Query: 753  QSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQI 932
            ++KP GGAEWL SLR+ DL EV+EAL TLPGVGPKVAAC+ALFSLDQHHAIPVDTHVWQI
Sbjct: 252  KAKPVGGAEWLLSLRDSDLEEVIEALSTLPGVGPKVAACVALFSLDQHHAIPVDTHVWQI 311

Query: 933  ATRYLIPELANTRLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIAELPLQKALLQPTFES 1109
            ATRYL+PELA  RLTPKLC RVAEAFVSK+GKYAGWAQT+LFIAELP QKALL    E+
Sbjct: 312  ATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLLFIAELPQQKALLPANLEN 370


>ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Ricinus communis]
            gi|223540555|gb|EEF42122.1| 8-oxoguanine DNA glycosylase,
            putative [Ricinus communis]
          Length = 412

 Score =  449 bits (1156), Expect = e-124
 Identities = 224/357 (62%), Positives = 273/357 (76%), Gaps = 1/357 (0%)
 Frame = +3

Query: 36   RTPTTKTPLITSNPKPPHLK-NTKPISITCSFKQTKTRTLIPKTPCSSETITWQPLNISR 212
            R P  + P  T+  K P     T P +I  + ++ K   + P T     T  W  LN+++
Sbjct: 2    RRPIPQIPHSTAAAKSPTPSPTTPPQTIKITSRKHKKSLIKPIT-----TTNWNALNLTQ 56

Query: 213  TELYLPLTFPTGQTFRWKQTGVYQYTGVIKSHLVSLKQLDNGDGDIAFYVHRSNHECNVK 392
            +EL LPLTFPTGQTFRWKQTG +QYTG +  HL+SLK   + +G++ +++H +  E   K
Sbjct: 57   SELSLPLTFPTGQTFRWKQTGHHQYTGTLGPHLISLKH-HHQNGNVYYHIHTTPSETAAK 115

Query: 393  EALNDYLNVGISLREMWEAFSACDLRFKDVALRLGGARVLRQDPFECLVQFLCSSNNNIG 572
             AL D+LN+ +SL  +W  FSA D RF ++A+ L GARVLRQDP ECL+QFLCSSNNNI 
Sbjct: 116  SALLDFLNINVSLANIWADFSASDSRFAELAMHLKGARVLRQDPLECLIQFLCSSNNNIA 175

Query: 573  RITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAAGFGYRAKYIVGTVKSL 752
            RIT MVD++SSLG YLG+VEGF+F+EFP LERL LV+E + RAAGFGYRAKYI GT+ +L
Sbjct: 176  RITKMVDYVSSLGQYLGNVEGFEFYEFPDLERLGLVTEEQLRAAGFGYRAKYITGTIDAL 235

Query: 753  QSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQI 932
            Q KPGGG EWL +LR LDL  V++ALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQI
Sbjct: 236  QLKPGGGVEWLTALRKLDLQVVIDALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQI 295

Query: 933  ATRYLIPELANTRLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIAELPLQKALLQPTF 1103
            ATR+L+PELA  RLTPKLC RVA+AFVSK+GKYAGWAQT+LFIAELP QK+LL  +F
Sbjct: 296  ATRHLLPELAGARLTPKLCSRVADAFVSKYGKYAGWAQTLLFIAELPPQKSLLPSSF 352


>ref|XP_004171524.1| PREDICTED: N-glycosylase/DNA lyase-like, partial [Cucumis sativus]
          Length = 359

 Score =  447 bits (1151), Expect = e-123
 Identities = 223/334 (66%), Positives = 259/334 (77%)
 Frame = +3

Query: 108  ISITCSFKQTKTRTLIPKTPCSSETITWQPLNISRTELYLPLTFPTGQTFRWKQTGVYQY 287
            +S+  S K       + K+P S  +  W  LN++R++L LPLTFPTGQTFRWKQT  +++
Sbjct: 3    VSLHHSSKNPNKTLPLLKSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPFEF 62

Query: 288  TGVIKSHLVSLKQLDNGDGDIAFYVHRSNHECNVKEALNDYLNVGISLREMWEAFSACDL 467
            TGV+ SHL+SL  L NGD     +   ++     + AL D+LN  ISL  +WE FSA D 
Sbjct: 63   TGVVGSHLISLNHLPNGDVSYCLHFSSTSSSAAARLALLDFLNASISLSSIWEVFSAADP 122

Query: 468  RFKDVALRLGGARVLRQDPFECLVQFLCSSNNNIGRITGMVDFISSLGVYLGSVEGFDFH 647
            RF  +A    GARVLRQDP ECL+QFLCSSNNNIGRIT MVD+ISSLG YLG+V GFDF+
Sbjct: 123  RFDALARHFEGARVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFY 182

Query: 648  EFPSLERLSLVSENEFRAAGFGYRAKYIVGTVKSLQSKPGGGAEWLASLRNLDLNEVVEA 827
            EFPSLERLSLVSE E R AGFGYRAKYI+G V +L++KP GGAEWL SLR+ DL EV+EA
Sbjct: 183  EFPSLERLSLVSEAELREAGFGYRAKYIIGAVNALKAKPVGGAEWLLSLRDSDLEEVIEA 242

Query: 828  LCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLIPELANTRLTPKLCIRVAEA 1007
            L TLPGVGPKVAAC+ALFSLDQHHAIPVDTHVWQIATRYL+PELA  RLTPKLC RVAEA
Sbjct: 243  LSTLPGVGPKVAACVALFSLDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEA 302

Query: 1008 FVSKFGKYAGWAQTVLFIAELPLQKALLQPTFES 1109
            FVSK+GKYAGWAQT+LFIAELP QKALL    E+
Sbjct: 303  FVSKYGKYAGWAQTLLFIAELPQQKALLPANLEN 336


>ref|XP_002890455.1| 8-oxoguanine-DNA glycosylase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297336297|gb|EFH66714.1| 8-oxoguanine-DNA glycosylase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  437 bits (1125), Expect = e-120
 Identities = 232/357 (64%), Positives = 262/357 (73%)
 Frame = +3

Query: 24   MKRQRTPTTKTPLITSNPKPPHLKNTKPISITCSFKQTKTRTLIPKTPCSSETITWQPLN 203
            MKR R   T  P I++  KPP      PI      KQ   RT          T  W  L 
Sbjct: 1    MKRPRA--TSPPSISTTVKPPLSPPVTPI-----LKQKLHRT--------GTTPKWFSLK 45

Query: 204  ISRTELYLPLTFPTGQTFRWKQTGVYQYTGVIKSHLVSLKQLDNGDGDIAFYVHRSNHEC 383
            ++ TEL LPLTFPTGQTFRWKQTG  QY+G I  HLVSL+Q   GD  +++ VH S    
Sbjct: 46   LTHTELTLPLTFPTGQTFRWKQTGAIQYSGAIGPHLVSLRQRP-GDDTVSYCVHCSTSPK 104

Query: 384  NVKEALNDYLNVGISLREMWEAFSACDLRFKDVALRLGGARVLRQDPFECLVQFLCSSNN 563
              + AL D+LN  ISL E+W  FS  D RF ++A  L GARVLRQDP ECL+QFLCSSNN
Sbjct: 105  LAELALLDFLNAEISLAELWSDFSKKDPRFGELAKHLRGARVLRQDPLECLIQFLCSSNN 164

Query: 564  NIGRITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAAGFGYRAKYIVGTV 743
            NIGRIT MVDF+SSLG++LG ++GF+FH+FPSL+RLS VSE EFR AGFGYRAKYI GTV
Sbjct: 165  NIGRITKMVDFVSSLGLHLGDIDGFEFHQFPSLDRLSRVSEAEFRKAGFGYRAKYITGTV 224

Query: 744  KSLQSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFSLDQHHAIPVDTHV 923
             +LQSKPGGG EWL SLR LDL E V ALCTLPGVGPKVAACIALFSLDQH AIPVDTHV
Sbjct: 225  NALQSKPGGGDEWLLSLRKLDLQEAVSALCTLPGVGPKVAACIALFSLDQHSAIPVDTHV 284

Query: 924  WQIATRYLIPELANTRLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIAELPLQKALLQ 1094
            WQIAT YL+P+LA  +LTPKL  RVAEAFVSK+G+YAGWAQT+LFIAELP QK LLQ
Sbjct: 285  WQIATNYLLPDLAGAKLTPKLHCRVAEAFVSKYGEYAGWAQTLLFIAELPAQKTLLQ 341


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