BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017638
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   150   5e-65
ref|XP_001835316.2| transcriptional factor B3 [Coprinopsis ciner...   153   7e-64
gb|EEQ86974.1| PIF1 [Ajellomyces dermatitidis ER-3]                   131   2e-63
gb|EIE75949.1| hypothetical protein RO3G_00653 [Rhizopus delemar...   134   2e-61
gb|EIE78240.1| hypothetical protein RO3G_02944 [Rhizopus delemar...   134   2e-61

>ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355484555|gb|AES65758.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1873

 Score =  150 bits (379), Expect(3) = 5e-65
 Identities = 91/230 (39%), Positives = 120/230 (52%), Gaps = 3/230 (1%)
 Frame = -3

Query: 683  VELPSSI---QSCTDLKDLIFFVYPQLDEEGTTSAEFLKERTILAARNDDVKDINDMALN 513
            VE+P  +    +   L  LI FVYP L++       F +ER ILA   D V+ +N+  ++
Sbjct: 1620 VEIPEDLLISDTTNPLMSLIDFVYPDLNDN-LGDQLFFQERGILAPTLDSVEHVNEFMMS 1678

Query: 512  LFPGEVIEYLAADKAVDTDCRSQSTKKRKTTHSTPNNPGSQSKKRQNSDKPPTPVGEYPS 333
            L PGE  EYL++D      CRS      ++   TP                         
Sbjct: 1679 LIPGEEKEYLSSDSV----CRSGENSDVQSEWFTP------------------------- 1709

Query: 332  EFLNSLDPSSLPPFRLKLKLGCPIMLLRNITPKAGLCNGTRLTVLQCAPKVIEAVIITGE 153
            EFLN +  S +P  RLKLK+GCP+ML+RNI    GLCNGTRLTV       I A +ITG+
Sbjct: 1710 EFLNGIKSSGIPNHRLKLKVGCPVMLMRNIDQANGLCNGTRLTVTHLGKSTIAATVITGK 1769

Query: 152  HAGEPALLPRISLTPSSTEMAVPMTRRQFPVRLAYGMTINKSQGQSVKYV 3
             AG    +PR++L PS   +     RRQFP+ L + MTINKSQGQS+  V
Sbjct: 1770 RAGTSVFIPRMNLIPSDPGLPFKFKRRQFPLTLCFAMTINKSQGQSLSRV 1819



 Score =  105 bits (261), Expect(3) = 5e-65
 Identities = 58/121 (47%), Positives = 74/121 (61%), Gaps = 11/121 (9%)
 Frame = -2

Query: 1098 QLIIWDEVPMQHRYCVEAVDRSLQDMFGNK------KTFGGITVILGGDFRQTLPVIPKG 937
            +LIIWDE PM HR+C EAVDRSL+D+          K FGG+TV+LGGDFRQ LPV+  G
Sbjct: 1494 KLIIWDEAPMMHRWCFEAVDRSLRDIMSKNDPLNALKPFGGMTVVLGGDFRQILPVVRGG 1553

Query: 936  VRADFVAASLRRSPLWIHVQVLHLFRNMRLDMS----DPDNI-DFGSYLTEVNTYNNTAF 772
             R D V AS+  S LW +  VL L  NMRL  S    D + I +FG ++  +   N+ + 
Sbjct: 1554 TRPDIVDASVNSSKLWAYCNVLRLTVNMRLGASSVPADQEEIANFGKWILSIGDGNDASD 1613

Query: 771  E 769
            E
Sbjct: 1614 E 1614



 Score = 41.6 bits (96), Expect(3) = 5e-65
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = -1

Query: 1312 GTGKTFLYNTIAASCRCVGSIVIMVXXXXXXXXXXXXGRTAHSTFSLPLNVFNDTMCGFS 1133
            GTGKTF++ T++A+ R  G IV+              GRTAHS  ++P+ +   +     
Sbjct: 1422 GTGKTFIWKTLSAAVRSKGLIVLNAASSGIAALLLPGGRTAHSALTVPVEINEASSLKML 1481

Query: 1132 KGSLQAGLFR 1103
            K S +A L R
Sbjct: 1482 KDSPRADLVR 1491


>ref|XP_001835316.2| transcriptional factor B3 [Coprinopsis cinerea okayama7#130]
            gi|298403796|gb|EAU86521.2| transcriptional factor B3
            [Coprinopsis cinerea okayama7#130]
          Length = 1655

 Score =  153 bits (387), Expect(2) = 7e-64
 Identities = 89/228 (39%), Positives = 132/228 (57%), Gaps = 1/228 (0%)
 Frame = -3

Query: 683  VELPSSIQSCTDLKDLIFFVYPQLDEEGTTSAEFLKERTILAARNDDVKDINDMALNLFP 504
            ++ P  ++S +    LI F+YP +D      A++  +R ILA RN DV D+N+  L+   
Sbjct: 1411 LDFPQDMRSPSS-NSLINFIYPGIDSPTPPPAQYFLDRMILAPRNADVSDLNEGILDKMA 1469

Query: 503  GEVIEYLAADKAVDTDCRSQSTKKRKTTHSTPNNPGSQSKKRQNSDKPPTPVGEYPSEFL 324
            G+   Y++AD+ +              T S+ ++P                    P EFL
Sbjct: 1470 GQKRTYVSADELL--------------TESSASHP-------------------VPIEFL 1496

Query: 323  NSLDPSSLPPFRLKLKLGCPIMLLRNITPKAGLCNGTRLTVLQCAPKVIEAVIITGEHAG 144
             +++ S LPP  L +KLG P++LLRN++PK GLCNGTR+ V + + +V+E  II GE  G
Sbjct: 1497 RTVNASGLPPGELSMKLGSPLILLRNLSPKHGLCNGTRMVVTRMSDRVLEVQIIGGECNG 1556

Query: 143  EPALLPRISLTPS-STEMAVPMTRRQFPVRLAYGMTINKSQGQSVKYV 3
            +   +PRISL PS + ++ +   RRQFPVRLA+ +TINK+QGQSVKYV
Sbjct: 1557 DRVFIPRISLIPSDNDDILIKFRRRQFPVRLAFALTINKAQGQSVKYV 1604



 Score =  118 bits (296), Expect(2) = 7e-64
 Identities = 58/122 (47%), Positives = 77/122 (63%)
 Frame = -2

Query: 1146 CVAFQKVPCKLAFLERQLIIWDEVPMQHRYCVEAVDRSLQDMFGNKKTFGGITVILGGDF 967
            C   ++ P      + +LIIWDE   QHRY  EA+DR+ +D+  N   FGGITV+ GGDF
Sbjct: 1283 CDIAKRSPRADLLCQTRLIIWDEAVPQHRYAFEALDRTCRDIRDNDSPFGGITVVFGGDF 1342

Query: 966  RQTLPVIPKGVRADFVAASLRRSPLWIHVQVLHLFRNMRLDMSDPDNIDFGSYLTEVNTY 787
            +QTLPV+ +G R   V A++R S LW H+ VLHL +NMRLD  DP +I F  +L +V   
Sbjct: 1343 QQTLPVVRRGSREGIVGATIRYSYLWEHIHVLHLRQNMRLDAQDPSSIGFAQWLIDVGHG 1402

Query: 786  NN 781
             N
Sbjct: 1403 QN 1404


>gb|EEQ86974.1| PIF1 [Ajellomyces dermatitidis ER-3]
          Length = 1477

 Score =  131 bits (330), Expect(3) = 2e-63
 Identities = 81/228 (35%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
 Frame = -3

Query: 683  VELPSSIQSCTDLKDLIFFVYPQLD-EEGTTSAEFLKERTILAARNDDVKDINDMALNLF 507
            V+LPS I    D+  L   V+P  +        ++ + R IL   N D   IN+  +   
Sbjct: 1262 VDLPSYIHRAADIGVLCERVFPTAELRTAAVCPDYFESRAILTVLNQDAFRINERVMAAM 1321

Query: 506  PGEVIEYLAADKAVDTDCRSQSTKKRKTTHSTPNNPGSQSKKRQNSDKPPTPVGEYPSEF 327
            PG+V  + AAD A                               ++D       E+  E+
Sbjct: 1322 PGDVHTFYAADMA-------------------------------HTDDLALGCEEFSREY 1350

Query: 326  LNSLDPSSLPPFRLKLKLGCPIMLLRNITPKAGLCNGTRLTVLQCAPKVIEAVIITGEHA 147
            L +++ S+LPP  L+LK+G P+MLLRN+ P  GLCNGTR+ V     +++E  II+G + 
Sbjct: 1351 LAAINCSALPPSVLRLKVGTPVMLLRNLRPSEGLCNGTRMIVQWMTTRLLEVKIISGTYK 1410

Query: 146  GEPALLPRISLTPSSTEMAVPMTRRQFPVRLAYGMTINKSQGQSVKYV 3
            G   +LPRI L     E+   MTRRQFPVR  + MTINKSQGQS+  V
Sbjct: 1411 GSVHILPRIDLQAQPVEIPFGMTRRQFPVRPCFAMTINKSQGQSLSTV 1458



 Score =  119 bits (298), Expect(3) = 2e-63
 Identities = 60/104 (57%), Positives = 78/104 (75%)
 Frame = -2

Query: 1095 LIIWDEVPMQHRYCVEAVDRSLQDMFGNKKTFGGITVILGGDFRQTLPVIPKGVRADFVA 916
            LIIWDE PMQHRYC+E VDR LQD+  + + FGG++VI GGDF QTLPV+P+G RA  VA
Sbjct: 1154 LIIWDEAPMQHRYCMEVVDRLLQDLRSSDELFGGVSVIFGGDFAQTLPVVPRGSRAAVVA 1213

Query: 915  ASLRRSPLWIHVQVLHLFRNMRLDMSDPDNIDFGSYLTEVNTYN 784
            A L+ S +W  + VLHL RNMRL  +D DN+ F ++L ++ +YN
Sbjct: 1214 ACLQCSYIWRRLTVLHLRRNMRL-AADDDNMMFANWLGQM-SYN 1255



 Score = 40.8 bits (94), Expect(3) = 2e-63
 Identities = 25/70 (35%), Positives = 38/70 (54%)
 Frame = -1

Query: 1312 GTGKTFLYNTIAASCRCVGSIVIMVXXXXXXXXXXXXGRTAHSTFSLPLNVFNDTMCGFS 1133
            GTGKTFLY  + +  R  G  V+ V            GRTAHS F++P+ +  D++   S
Sbjct: 1081 GTGKTFLYRALYSCLRAGGKTVLCVASSGIAAVLLPRGRTAHSRFTIPIELDADSV---S 1137

Query: 1132 KGSLQAGLFR 1103
            K ++++ L R
Sbjct: 1138 KVTIRSELGR 1147


>gb|EIE75949.1| hypothetical protein RO3G_00653 [Rhizopus delemar RA 99-880]
          Length = 1480

 Score =  134 bits (337), Expect(3) = 2e-61
 Identities = 82/225 (36%), Positives = 118/225 (52%)
 Frame = -3

Query: 677  LPSSIQSCTDLKDLIFFVYPQLDEEGTTSAEFLKERTILAARNDDVKDINDMALNLFPGE 498
            LP  I     L   +  +YP+   E T   EF +ERTI+A +ND V +IN   L+  PG 
Sbjct: 1235 LPRYIAQYHSLTTFVDSIYPKEIMEQTLDPEFFQERTIIAPKNDLVDEINRYVLDQLPGN 1294

Query: 497  VIEYLAADKAVDTDCRSQSTKKRKTTHSTPNNPGSQSKKRQNSDKPPTPVGEYPSEFLNS 318
             I   A D+    D                 + GS+ +             + P+E+L S
Sbjct: 1295 KISLFAVDRVTQED-----------------STGSEDR-------------QMPTEYLQS 1324

Query: 317  LDPSSLPPFRLKLKLGCPIMLLRNITPKAGLCNGTRLTVLQCAPKVIEAVIITGEHAGEP 138
            L+P  LPP  L+LK+G P+M+LRNI  + GLCNGTR+TVL     +++  +   +  G  
Sbjct: 1325 LNPHGLPPSVLELKVGMPVMILRNINVEKGLCNGTRVTVLSIGEFLLKVKLPGVD--GRV 1382

Query: 137  ALLPRISLTPSSTEMAVPMTRRQFPVRLAYGMTINKSQGQSVKYV 3
             ++PR +L+    E    +TR+QFPVR ++ MTINKSQGQS+K V
Sbjct: 1383 EVIPRFTLSTLENEYPFTLTRKQFPVRPSFAMTINKSQGQSLKIV 1427



 Score = 95.5 bits (236), Expect(3) = 2e-61
 Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
 Frame = -2

Query: 1107 LERQLIIWDEVPMQHRYCVEAVDRSLQDMFGN-KKTFGGITVILGGDFRQTLPVIPKGVR 931
            ++  LIIWDEVPMQHR+C EAV+R+LQD+  N    FGGI V+LGGDF Q  PV+  G R
Sbjct: 1118 MQCSLIIWDEVPMQHRHCFEAVNRTLQDICSNFGSLFGGIPVVLGGDFAQIGPVVKNGQR 1177

Query: 930  ADFVAASLRRS-PLWIHVQVLHLFRNMRLDMSDPDNIDFGSYLTEVNTYNN 781
               V ASL +S  +W +++ L L  NMRL  S P +  F  ++  + +YN+
Sbjct: 1178 HHIVEASLAKSIEIWPNLKKLKLTENMRLSGSSPIDQSFSQWIGSL-SYNS 1227



 Score = 55.1 bits (131), Expect(3) = 2e-61
 Identities = 28/71 (39%), Positives = 39/71 (54%)
 Frame = -1

Query: 1312 GTGKTFLYNTIAASCRCVGSIVIMVXXXXXXXXXXXXGRTAHSTFSLPLNVFNDTMCGFS 1133
            GTGKTF+YNT+    R  G IV+ V            GRT+HS F +PLN++ D++C   
Sbjct: 1049 GTGKTFVYNTLCHYFRRQGKIVVCVASSGIASLLLPGGRTSHSRFKIPLNIYPDSVCPIK 1108

Query: 1132 KGSLQAGLFRE 1100
            K S  A +  +
Sbjct: 1109 KNSDLAAMLMQ 1119


>gb|EIE78240.1| hypothetical protein RO3G_02944 [Rhizopus delemar RA 99-880]
          Length = 1283

 Score =  134 bits (337), Expect(3) = 2e-61
 Identities = 82/225 (36%), Positives = 118/225 (52%)
 Frame = -3

Query: 677  LPSSIQSCTDLKDLIFFVYPQLDEEGTTSAEFLKERTILAARNDDVKDINDMALNLFPGE 498
            LP  I     L   +  +YP+   E T   EF +ERTI+A +ND V +IN   L+  PG 
Sbjct: 1038 LPRYIAQYHSLTTFVDSIYPKEIMEQTLDPEFFQERTIIAPKNDLVDEINRYVLDQLPGN 1097

Query: 497  VIEYLAADKAVDTDCRSQSTKKRKTTHSTPNNPGSQSKKRQNSDKPPTPVGEYPSEFLNS 318
             I   A D+    D                 + GS+ +             + P+E+L S
Sbjct: 1098 KISLFAVDRVTQED-----------------STGSEDR-------------QMPTEYLQS 1127

Query: 317  LDPSSLPPFRLKLKLGCPIMLLRNITPKAGLCNGTRLTVLQCAPKVIEAVIITGEHAGEP 138
            L+P  LPP  L+LK+G P+M+LRNI  + GLCNGTR+TVL     +++  +   +  G  
Sbjct: 1128 LNPHGLPPSVLELKVGMPVMILRNINVEKGLCNGTRVTVLSIGEFLLKVKLPGVD--GRV 1185

Query: 137  ALLPRISLTPSSTEMAVPMTRRQFPVRLAYGMTINKSQGQSVKYV 3
             ++PR +L+    E    +TR+QFPVR ++ MTINKSQGQS+K V
Sbjct: 1186 EVIPRFTLSTLENEYPFTLTRKQFPVRPSFAMTINKSQGQSLKIV 1230



 Score = 95.5 bits (236), Expect(3) = 2e-61
 Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
 Frame = -2

Query: 1107 LERQLIIWDEVPMQHRYCVEAVDRSLQDMFGN-KKTFGGITVILGGDFRQTLPVIPKGVR 931
            ++  LIIWDEVPMQHR+C EAV+R+LQD+  N    FGGI V+LGGDF Q  PV+  G R
Sbjct: 921  MQCSLIIWDEVPMQHRHCFEAVNRTLQDICSNFGSLFGGIPVVLGGDFAQIGPVVKNGQR 980

Query: 930  ADFVAASLRRS-PLWIHVQVLHLFRNMRLDMSDPDNIDFGSYLTEVNTYNN 781
               V ASL +S  +W +++ L L  NMRL  S P +  F  ++  + +YN+
Sbjct: 981  HHIVEASLAKSIEIWPNLKKLKLTENMRLSGSSPIDQSFSQWIGSL-SYNS 1030



 Score = 55.1 bits (131), Expect(3) = 2e-61
 Identities = 28/71 (39%), Positives = 39/71 (54%)
 Frame = -1

Query: 1312 GTGKTFLYNTIAASCRCVGSIVIMVXXXXXXXXXXXXGRTAHSTFSLPLNVFNDTMCGFS 1133
            GTGKTF+YNT+    R  G IV+ V            GRT+HS F +PLN++ D++C   
Sbjct: 852  GTGKTFVYNTLCHYFRRQGKIVVCVASSGIASLLLPGGRTSHSRFKIPLNIYPDSVCPIK 911

Query: 1132 KGSLQAGLFRE 1100
            K S  A +  +
Sbjct: 912  KNSDLAAMLMQ 922