BLASTX nr result
ID: Coptis21_contig00017613
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017613 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32873.3| unnamed protein product [Vitis vinifera] 63 2e-08 ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta... 62 6e-08 ref|XP_003634122.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 58 9e-07 ref|NP_001234295.1| transcription factor IIIA [Solanum lycopersi... 55 8e-06 >emb|CBI32873.3| unnamed protein product [Vitis vinifera] Length = 390 Score = 63.2 bits (152), Expect = 2e-08 Identities = 27/38 (71%), Positives = 32/38 (84%) Frame = +3 Query: 18 EDKEGTKSNTCEECGASFRKPAYLKEHIRSHSDEIYEF 131 E+KEG KSN CEECGASF+KPAYLK+H++SHS E F Sbjct: 54 EEKEGEKSNACEECGASFKKPAYLKQHMQSHSLEALNF 91 >ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|222835723|gb|EEE74158.1| predicted protein [Populus trichocarpa] Length = 335 Score = 62.0 bits (149), Expect = 5e-08 Identities = 28/46 (60%), Positives = 35/46 (76%) Frame = +3 Query: 12 GEEDKEGTKSNTCEECGASFRKPAYLKEHIRSHSDEIYEFSKFENC 149 G+E KEG KSNTCE CGASF+KPAYL +H++SHS E F++C Sbjct: 40 GDEGKEGVKSNTCENCGASFKKPAYLIQHMQSHSLERPFKCLFDDC 85 >ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like [Vitis vinifera] Length = 370 Score = 61.6 bits (148), Expect = 6e-08 Identities = 26/34 (76%), Positives = 31/34 (91%) Frame = +3 Query: 18 EDKEGTKSNTCEECGASFRKPAYLKEHIRSHSDE 119 E+KEG KSN CEECGASF+KPAYLK+H++SHS E Sbjct: 54 EEKEGEKSNACEECGASFKKPAYLKQHMQSHSLE 87 >ref|XP_003634122.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor IIIA-like [Vitis vinifera] Length = 314 Score = 57.8 bits (138), Expect = 9e-07 Identities = 24/31 (77%), Positives = 29/31 (93%) Frame = +3 Query: 27 EGTKSNTCEECGASFRKPAYLKEHIRSHSDE 119 EG KSNTCEECGASF+KPAYLK+H+++HS E Sbjct: 2 EGEKSNTCEECGASFKKPAYLKQHMQNHSLE 32 >ref|NP_001234295.1| transcription factor IIIA [Solanum lycopersicum] gi|115279798|gb|ABI85392.1| transcription factor IIIA [Solanum lycopersicum] gi|115279802|gb|ABI85394.1| transcription factor IIIA [Solanum lycopersicum] Length = 92 Score = 54.7 bits (130), Expect = 8e-06 Identities = 23/38 (60%), Positives = 32/38 (84%) Frame = +3 Query: 18 EDKEGTKSNTCEECGASFRKPAYLKEHIRSHSDEIYEF 131 E+ +G+K N CEECGA+F+KPA+LK+H++SHS EI F Sbjct: 55 ENAKGSKMNICEECGATFQKPAHLKQHLQSHSLEIEIF 92