BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017610
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15323.3| unnamed protein product [Vitis vinifera]              178   1e-42
ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial...   178   1e-42
ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|2...   155   8e-36
ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-...   153   4e-35
ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata ...   146   4e-33

>emb|CBI15323.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  178 bits (451), Expect = 1e-42
 Identities = 98/198 (49%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
 Frame = -3

Query: 579 HGFNSWKSYHGFLANPVLLRGVVGNAHLRNQSKKFI-DHVLFMRSQLQRRGY----QVHR 415
           HG +  +S +GF++NP LL+  +  A L+  SK      V F+R+Q  RR +        
Sbjct: 91  HGLS--RSVYGFISNPTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDS 148

Query: 414 YNTPRYNWRSSFPTADNVVLGLISANVAVFMLWRYLDTSFMRKHFMISVENVRSGRVHTM 235
           Y     +W S   T D VVLGLI ANVAVFMLWR  D  FM  +F IS++N +SGR+HT+
Sbjct: 149 YGRRWRSWLSGLSTND-VVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTL 207

Query: 234 ITSAFSHIDVGHLLSNMIGLYFFGSSIGRYLGQDFXXXXXXXXXXXGSIFYLVHHAFMSP 55
           ITSAFSHID+GHL+SNMIGLYFFG +IGR  G +F           GS+FYLVHHAFM+P
Sbjct: 208 ITSAFSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFMAP 267

Query: 54  ISEGSGMWYKDPKKVEGL 1
            S+G  MW  +P  + GL
Sbjct: 268 SSKGQQMWSINPSAIPGL 285


>ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera]
          Length = 333

 Score =  178 bits (451), Expect = 1e-42
 Identities = 98/198 (49%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
 Frame = -3

Query: 579 HGFNSWKSYHGFLANPVLLRGVVGNAHLRNQSKKFI-DHVLFMRSQLQRRGY----QVHR 415
           HG +  +S +GF++NP LL+  +  A L+  SK      V F+R+Q  RR +        
Sbjct: 62  HGLS--RSVYGFISNPTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDS 119

Query: 414 YNTPRYNWRSSFPTADNVVLGLISANVAVFMLWRYLDTSFMRKHFMISVENVRSGRVHTM 235
           Y     +W S   T D VVLGLI ANVAVFMLWR  D  FM  +F IS++N +SGR+HT+
Sbjct: 120 YGRRWRSWLSGLSTND-VVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTL 178

Query: 234 ITSAFSHIDVGHLLSNMIGLYFFGSSIGRYLGQDFXXXXXXXXXXXGSIFYLVHHAFMSP 55
           ITSAFSHID+GHL+SNMIGLYFFG +IGR  G +F           GS+FYLVHHAFM+P
Sbjct: 179 ITSAFSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFMAP 238

Query: 54  ISEGSGMWYKDPKKVEGL 1
            S+G  MW  +P  + GL
Sbjct: 239 SSKGQQMWSINPSAIPGL 256


>ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|222855471|gb|EEE93018.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  155 bits (392), Expect = 8e-36
 Identities = 76/136 (55%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
 Frame = -3

Query: 402 RYNWRSSFP--TADNVVLGLISANVAVFMLWRYLDTSFMRKHFMISVENVRSGRVHTMIT 229
           R  WRS F   +ADNVVLGLI AN AVFMLWR  D  FM ++FMIS++N RSGR+HT++T
Sbjct: 29  RRGWRSWFNRLSADNVVLGLIIANAAVFMLWRIEDQKFMMENFMISLDNFRSGRIHTLVT 88

Query: 228 SAFSHIDVGHLLSNMIGLYFFGSSIGRYLGQDFXXXXXXXXXXXGSIFYLVHHAFMSPIS 49
           SAFSHID+GH+  NMIGLYFFG++I R  G +F           GS+FYL+HH +M   S
Sbjct: 89  SAFSHIDIGHIAFNMIGLYFFGTNIARTFGPEFLLKLYLAGAIGGSVFYLLHHGYMDLSS 148

Query: 48  EGSGMWYKDPKKVEGL 1
           +G GMW +D  +  GL
Sbjct: 149 KGQGMWARDSSRTPGL 164


>ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-like [Cucumis sativus]
          Length = 336

 Score =  153 bits (386), Expect = 4e-35
 Identities = 89/218 (40%), Positives = 122/218 (55%), Gaps = 16/218 (7%)
 Frame = -3

Query: 606 GSITQTTLKHGFNSWKSY-------HGFLANPVLLRGVV---GNAHLRNQSKKFID-HVL 460
           GS     ++    SW S+       HGF + PV+ +  +    N + +   K  ++   L
Sbjct: 43  GSFVTRPIQDHSRSWSSHRSFAQKIHGFFSVPVVGKRFIVNPSNTYFKGSMKSVVESRSL 102

Query: 459 FMRSQLQRRGYQ-----VHRYNTPRYNWRSSFPTADNVVLGLISANVAVFMLWRYLDTSF 295
           F  +   +  +Q     VH++   R +W     T + VVLGLI ANVAVF+LWR  D  F
Sbjct: 103 FTGTPFSKLKFQLKPGFVHQWGGRR-SWFQRL-TPNEVVLGLIIANVAVFLLWRIADPIF 160

Query: 294 MRKHFMISVENVRSGRVHTMITSAFSHIDVGHLLSNMIGLYFFGSSIGRYLGQDFXXXXX 115
           M K+F IS+ENVRSGR+HT+ITSAFSHID GH++SNM+GLYFFG +IG   G +F     
Sbjct: 161 MSKNFTISLENVRSGRIHTLITSAFSHIDTGHIVSNMVGLYFFGMNIGNVFGSEFLLKLY 220

Query: 114 XXXXXXGSIFYLVHHAFMSPISEGSGMWYKDPKKVEGL 1
                 GS FYL HH F +  S+    W +DP + +GL
Sbjct: 221 LAGAIGGSAFYLAHHLFQALSSKSRSFWGEDPVRAKGL 258


>ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336130|gb|EFH66547.1| rhomboid family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score =  146 bits (369), Expect = 4e-33
 Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 4/157 (2%)
 Frame = -3

Query: 459 FMRSQLQRRGYQVHRYNT-PRYNWRSSFPTADN--VVLGLISANVAVFMLWRYLDTSFMR 289
           F+ SQ  ++G++  R++   R  W+       +  VVLGL+ AN  VFM+WR  +  FM 
Sbjct: 100 FIGSQFPKKGFEFERFSGFQRRGWKHWLQGLSDRDVVLGLVIANTGVFMMWRVFNQQFMM 159

Query: 288 KHFMISVENVRSGRVHTMITSAFSHIDVGHLLSNMIGLYFFGSSIGRYLGQDFXXXXXXX 109
           K+FMIS++N  SGR+HT+ITSAFSHID+GH++SNMIGLYFFG+SI R  G  F       
Sbjct: 160 KNFMISLDNFTSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYLA 219

Query: 108 XXXXGSIFYLVHHAFMSPIS-EGSGMWYKDPKKVEGL 1
               GS+FYL+HHA+M+  S +G G + +DP +  GL
Sbjct: 220 GALGGSVFYLIHHAYMATTSPKGQGAFMRDPSRTPGL 256