BLASTX nr result
ID: Coptis21_contig00017591
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017591 (276 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308872.1| predicted protein [Populus trichocarpa] gi|2... 84 9e-15 ref|XP_002273378.1| PREDICTED: G2/mitotic-specific cyclin-1 [Vit... 82 3e-14 emb|CAN73346.1| hypothetical protein VITISV_037918 [Vitis vinifera] 82 3e-14 dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum] 68 6e-14 ref|XP_002323225.1| cyclin b [Populus trichocarpa] gi|222867855|... 82 6e-14 >ref|XP_002308872.1| predicted protein [Populus trichocarpa] gi|222854848|gb|EEE92395.1| predicted protein [Populus trichocarpa] Length = 457 Score = 84.3 bits (207), Expect = 9e-15 Identities = 41/72 (56%), Positives = 50/72 (69%) Frame = -1 Query: 216 GTVHHWLIRYCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLA 37 G +H+ +C S+V A+ + YV RCTLNKTPFW +TLK HTGFS QL DCA +L Sbjct: 360 GMMHYDTTMFCPSMVAASAV----YVARCTLNKTPFWTDTLKKHTGFSEPQLKDCAGLLV 415 Query: 36 HFHSVASEDRLQ 1 +FHS ASE RLQ Sbjct: 416 YFHSKASEHRLQ 427 >ref|XP_002273378.1| PREDICTED: G2/mitotic-specific cyclin-1 [Vitis vinifera] gi|297736580|emb|CBI25451.3| unnamed protein product [Vitis vinifera] Length = 462 Score = 82.4 bits (202), Expect = 3e-14 Identities = 38/71 (53%), Positives = 53/71 (74%) Frame = -1 Query: 216 GTVHHWLIRYCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLA 37 G ++ + YCSS+ A+++ Y RC LNK+P WDETLK +TGFS +QLLDCAK+LA Sbjct: 365 GLANYATMMYCSSMFAASSV----YAARCALNKSPVWDETLKAYTGFSEAQLLDCAKLLA 420 Query: 36 HFHSVASEDRL 4 FHS+A+E++L Sbjct: 421 SFHSMAAENKL 431 >emb|CAN73346.1| hypothetical protein VITISV_037918 [Vitis vinifera] Length = 451 Score = 82.4 bits (202), Expect = 3e-14 Identities = 38/71 (53%), Positives = 53/71 (74%) Frame = -1 Query: 216 GTVHHWLIRYCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLA 37 G ++ + YCSS+ A+++ Y RC LNK+P WDETLK +TGFS +QLLDCAK+LA Sbjct: 354 GLANYATMMYCSSMXAASSV----YAARCALNKSPVWDETLKAYTGFSEAQLLDCAKLLA 409 Query: 36 HFHSVASEDRL 4 FHS+A+E++L Sbjct: 410 SFHSMAAENKL 420 >dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum] Length = 446 Score = 68.2 bits (165), Expect(2) = 6e-14 Identities = 33/63 (52%), Positives = 44/63 (69%) Frame = -1 Query: 189 YCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLAHFHSVASED 10 YC S++ A+ + YV + TLN TPFW++TLK HTGFS SQLL CAK+L +H A E Sbjct: 358 YCPSMIAASAV----YVAQHTLNCTPFWNDTLKLHTGFSESQLLGCAKLLVSYHMEAPEH 413 Query: 9 RLQ 1 +L+ Sbjct: 414 KLK 416 Score = 33.9 bits (76), Expect(2) = 6e-14 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 Query: 274 MENMIFFLAELALTQYELIRYCSSLV 197 MENM++FLAEL L Y YC S++ Sbjct: 338 MENMVYFLAELGLMNYATNIYCPSMI 363 >ref|XP_002323225.1| cyclin b [Populus trichocarpa] gi|222867855|gb|EEF04986.1| cyclin b [Populus trichocarpa] Length = 450 Score = 81.6 bits (200), Expect = 6e-14 Identities = 39/72 (54%), Positives = 50/72 (69%) Frame = -1 Query: 216 GTVHHWLIRYCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLA 37 G +H+ + +C S+V A+ + YV RCTLNKTP W +TLK HTGFS QL DCA +L Sbjct: 354 GLMHYDTVMFCPSMVAASAV----YVARCTLNKTPSWTDTLKKHTGFSEPQLKDCAGLLV 409 Query: 36 HFHSVASEDRLQ 1 +FHS A+E RLQ Sbjct: 410 YFHSKAAEHRLQ 421