BLASTX nr result

ID: Coptis21_contig00017591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017591
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308872.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002273378.1| PREDICTED: G2/mitotic-specific cyclin-1 [Vit...    82   3e-14
emb|CAN73346.1| hypothetical protein VITISV_037918 [Vitis vinifera]    82   3e-14
dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum]                      68   6e-14
ref|XP_002323225.1| cyclin b [Populus trichocarpa] gi|222867855|...    82   6e-14

>ref|XP_002308872.1| predicted protein [Populus trichocarpa] gi|222854848|gb|EEE92395.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/72 (56%), Positives = 50/72 (69%)
 Frame = -1

Query: 216 GTVHHWLIRYCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLA 37
           G +H+    +C S+V A+ +    YV RCTLNKTPFW +TLK HTGFS  QL DCA +L 
Sbjct: 360 GMMHYDTTMFCPSMVAASAV----YVARCTLNKTPFWTDTLKKHTGFSEPQLKDCAGLLV 415

Query: 36  HFHSVASEDRLQ 1
           +FHS ASE RLQ
Sbjct: 416 YFHSKASEHRLQ 427


>ref|XP_002273378.1| PREDICTED: G2/mitotic-specific cyclin-1 [Vitis vinifera]
           gi|297736580|emb|CBI25451.3| unnamed protein product
           [Vitis vinifera]
          Length = 462

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/71 (53%), Positives = 53/71 (74%)
 Frame = -1

Query: 216 GTVHHWLIRYCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLA 37
           G  ++  + YCSS+  A+++    Y  RC LNK+P WDETLK +TGFS +QLLDCAK+LA
Sbjct: 365 GLANYATMMYCSSMFAASSV----YAARCALNKSPVWDETLKAYTGFSEAQLLDCAKLLA 420

Query: 36  HFHSVASEDRL 4
            FHS+A+E++L
Sbjct: 421 SFHSMAAENKL 431


>emb|CAN73346.1| hypothetical protein VITISV_037918 [Vitis vinifera]
          Length = 451

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/71 (53%), Positives = 53/71 (74%)
 Frame = -1

Query: 216 GTVHHWLIRYCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLA 37
           G  ++  + YCSS+  A+++    Y  RC LNK+P WDETLK +TGFS +QLLDCAK+LA
Sbjct: 354 GLANYATMMYCSSMXAASSV----YAARCALNKSPVWDETLKAYTGFSEAQLLDCAKLLA 409

Query: 36  HFHSVASEDRL 4
            FHS+A+E++L
Sbjct: 410 SFHSMAAENKL 420


>dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum]
          Length = 446

 Score = 68.2 bits (165), Expect(2) = 6e-14
 Identities = 33/63 (52%), Positives = 44/63 (69%)
 Frame = -1

Query: 189 YCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLAHFHSVASED 10
           YC S++ A+ +    YV + TLN TPFW++TLK HTGFS SQLL CAK+L  +H  A E 
Sbjct: 358 YCPSMIAASAV----YVAQHTLNCTPFWNDTLKLHTGFSESQLLGCAKLLVSYHMEAPEH 413

Query: 9   RLQ 1
           +L+
Sbjct: 414 KLK 416



 Score = 33.9 bits (76), Expect(2) = 6e-14
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3

Query: 274 MENMIFFLAELALTQYELIRYCSSLV 197
           MENM++FLAEL L  Y    YC S++
Sbjct: 338 MENMVYFLAELGLMNYATNIYCPSMI 363


>ref|XP_002323225.1| cyclin b [Populus trichocarpa] gi|222867855|gb|EEF04986.1| cyclin b
           [Populus trichocarpa]
          Length = 450

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/72 (54%), Positives = 50/72 (69%)
 Frame = -1

Query: 216 GTVHHWLIRYCSSLVGANNILASKYVGRCTLNKTPFWDETLKHHTGFS*SQLLDCAKMLA 37
           G +H+  + +C S+V A+ +    YV RCTLNKTP W +TLK HTGFS  QL DCA +L 
Sbjct: 354 GLMHYDTVMFCPSMVAASAV----YVARCTLNKTPSWTDTLKKHTGFSEPQLKDCAGLLV 409

Query: 36  HFHSVASEDRLQ 1
           +FHS A+E RLQ
Sbjct: 410 YFHSKAAEHRLQ 421


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