BLASTX nr result

ID: Coptis21_contig00017590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017590
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36394.3| unnamed protein product [Vitis vinifera]              177   6e-43
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...   177   8e-43
ref|XP_002269053.1| PREDICTED: putative disease resistance prote...   177   1e-42
ref|XP_003632840.1| PREDICTED: putative disease resistance prote...   174   7e-42
emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera]   174   7e-42

>emb|CBI36394.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  177 bits (450), Expect = 6e-43
 Identities = 80/143 (55%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427 KGIGQELTKKCKRVPLVVKTLASLMRCKQTKEDWTDVLESDIWETQE-KSFLRPALLLSY 251
           K IG+++  KCK +PL +KTL +L+R K ++E+W +VL S++W+  E +  + PALLLSY
Sbjct: 40  KEIGEKIADKCKGLPLAIKTLGNLLRIKNSEEEWKNVLNSEVWQLDEFERDISPALLLSY 99

Query: 250 HALPSVLKRCFMYCAIFPKDHNMEKDQLVKLWMAQGYLGSDGARELERVGVGYFDALAMR 71
           + LP  ++RCF +CA+FPKD  +E+D+L+KLWMAQ YL SDG +E+E VG  YF+ LA R
Sbjct: 100 YDLPPAIQRCFSFCAVFPKDSVIERDELIKLWMAQSYLKSDGRKEMEMVGRTYFEYLAAR 159

Query: 70  SFLQDFEKGKDGNIVRCKMHDLV 2
           SF QDFEK  DGNI+RCKMHD+V
Sbjct: 160 SFFQDFEKYDDGNIIRCKMHDIV 182


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 923

 Score =  177 bits (449), Expect = 8e-43
 Identities = 79/143 (55%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427 KGIGQELTKKCKRVPLVVKTLASLMRCKQTKEDWTDVLESDIWETQE-KSFLRPALLLSY 251
           K IG+++  KCK +PL +KTL +L+R K ++E+W +VL S++W+  E +  + PALLLSY
Sbjct: 359 KEIGEKIADKCKGLPLAIKTLGNLLRIKNSEEEWKNVLNSEVWQLDEFERDISPALLLSY 418

Query: 250 HALPSVLKRCFMYCAIFPKDHNMEKDQLVKLWMAQGYLGSDGARELERVGVGYFDALAMR 71
           + LP  ++RCF +CA+FPKD  +E+D+L+KLWMAQ YL SDG++E+E VG  YF+ LA R
Sbjct: 419 YDLPPAIQRCFSFCAVFPKDSVIERDELIKLWMAQSYLKSDGSKEMEMVGRTYFEYLAAR 478

Query: 70  SFLQDFEKGKDGNIVRCKMHDLV 2
           SF QDFEK  DGNI+ CKMHD+V
Sbjct: 479 SFFQDFEKDDDGNIIHCKMHDIV 501


>ref|XP_002269053.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 910

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/142 (60%), Positives = 104/142 (73%), Gaps = 2/142 (1%)
 Frame = -1

Query: 421 IGQELTKKCKRVPLVVKTLASLMRCKQTKEDWTDVLESDIWETQ--EKSFLRPALLLSYH 248
           IG+++  KCK +PL VK L SLM+ K  KEDW +VL S +WE    EK  L PALLLSY+
Sbjct: 359 IGKKIADKCKGLPLAVKALGSLMQSKNNKEDWENVLNSKMWELDVFEKK-LSPALLLSYY 417

Query: 247 ALPSVLKRCFMYCAIFPKDHNMEKDQLVKLWMAQGYLGSDGARELERVGVGYFDALAMRS 68
            LP  +K+CF YCA+FPKDH++E+D L+KLWMAQ YL S   RE+E VG  YF+ LA RS
Sbjct: 418 DLPPPIKQCFSYCAVFPKDHSIERDDLIKLWMAQSYLNSKAGREMETVGREYFENLAARS 477

Query: 67  FLQDFEKGKDGNIVRCKMHDLV 2
           F QDFEK   GNIVRCKMHD+V
Sbjct: 478 FFQDFEKDDKGNIVRCKMHDIV 499


>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/143 (54%), Positives = 109/143 (76%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427 KGIGQELTKKCKRVPLVVKTLASLMRCKQTKEDWTDVLESDIWETQE-KSFLRPALLLSY 251
           K IG+++  KCK +PL +KTL +L+R K ++E+W  VL S++W+  E +  + PALLLSY
Sbjct: 336 KEIGEKIADKCKGLPLAIKTLGNLLRIKNSEEEWKYVLNSEVWQLDEFERDISPALLLSY 395

Query: 250 HALPSVLKRCFMYCAIFPKDHNMEKDQLVKLWMAQGYLGSDGARELERVGVGYFDALAMR 71
           + LP  ++RCF +CA+FPK   +E+D+L+KLWMAQ YL SDG++E+E +G  YF+ LA R
Sbjct: 396 YDLPPAIQRCFSFCAVFPKASVIERDELIKLWMAQSYLKSDGSKEMEMIGRTYFEYLAAR 455

Query: 70  SFLQDFEKGKDGNIVRCKMHDLV 2
           SF QDFEK  DGNI+RCKMHD+V
Sbjct: 456 SFFQDFEKDTDGNIIRCKMHDIV 478


>emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera]
          Length = 1295

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/143 (55%), Positives = 106/143 (74%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427 KGIGQELTKKCKRVPLVVKTLASLMRCKQTKEDWTDVLESDIWETQE-KSFLRPALLLSY 251
           K IG+ +  KCK +PL +KTL +LMR K  +E+W +VL S++W   E +  + PALLLSY
Sbjct: 400 KEIGENIADKCKGLPLAIKTLGNLMRSKHNREEWENVLCSEVWHLDEFERDISPALLLSY 459

Query: 250 HALPSVLKRCFMYCAIFPKDHNMEKDQLVKLWMAQGYLGSDGARELERVGVGYFDALAMR 71
           H LP  ++RCF +CA+FPKD  + + +L+KLWMAQ YL SDG++E+E VG  YF+ LA R
Sbjct: 460 HDLPPAIQRCFSFCAVFPKDSVIVRAELIKLWMAQSYLKSDGSKEMEMVGRTYFEYLAAR 519

Query: 70  SFLQDFEKGKDGNIVRCKMHDLV 2
           SF QDFEK  DGNI+RCKMHD+V
Sbjct: 520 SFFQDFEKDXDGNIIRCKMHDIV 542


Top