BLASTX nr result

ID: Coptis21_contig00017578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017578
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]               92   7e-17
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...    67   3e-09

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
 Frame = +2

Query: 2    EKQLNNIILGHFNHADRCKRVQDTADNCYYGTERGNSLFNNNQMAGPSPSVGFTSDSRLS 181
            E++ N   L    + D+ KRV    D  Y  TE   S F   +  G S +    + S   
Sbjct: 691  ERESNINDLSFHRYMDKGKRVGFVTDGSYAATE---STFGFYKQMGSSGTFTGVAGSDHP 747

Query: 182  SASTVKGKQSSYWCHSAAILH---DASDLRHSH---GKTSFLQNNNHFDHGLLRSFNSST 343
            S+S V  K     C+S  +L    DAS+  +S    GK S L ++   D+  ++S  S  
Sbjct: 748  SSSAVHDKS----CYSRQLLGMPPDASNASNSFNFSGKFSCLGSSG-LDNVFVKSI-SPP 801

Query: 344  LTAAPGLPLSEASTGFTSTNSVGRPSLTHMLSNNESVDISPHFLDENLRLLALRYALDPS 523
            + +   +P    STGF+S +S+  P+LT  L   ES+ +SP+ LDEN +LLALR+ L+ S
Sbjct: 802  MGSGINVPSQAVSTGFSSASSLSVPNLTPSLPTKESIGVSPYLLDENFKLLALRHILELS 861

Query: 524  KQKHPITSAEMEKQQGRLYSLSTELQQRGTTLGSSAAEEPKEG 652
             ++H ITS  M +++GR +S S++ + +G+ + +  ++E K G
Sbjct: 862  NREHAITSLGMNQKEGR-FSSSSDPKVQGSVVDTLTSDELKHG 903


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
            gi|223540952|gb|EEF42510.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 903

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
 Frame = +2

Query: 44   ADRCKRVQDTADNCYYGTERGNSLFNNNQMAGPSPSVGFTSDSRLSSASTVKGKQSSYWC 223
            AD  K V   A++ Y     G+++     M  PS      +D+  S+ S +  K  + + 
Sbjct: 664  ADNGKEVGCLANSSYIKKASGSNM--QKWMGNPSSYTRAMNDATYSNFSFMHDKNRNLY- 720

Query: 224  HSAAILHDASDLRHSH---GKTSFLQNNNHFDHGLLRSFNSSTLTAAPGLPLSEASTGFT 394
            HS+ +  D SD  +      K     N    DH +L S +S  + ++  +P  + S   T
Sbjct: 721  HSSNVPPDVSDAANFSVYLQKGPCFGNGGLLDHAVLTSMDSRQILSSQSVP--KVSPSST 778

Query: 395  STNSVGRPSLTHMLSNNESVDISPHFLDENLRLLALRYALDPSKQKHPITSAEMEKQQGR 574
            ST     P LT  + N ES+ + P+ LD+N +LLAL   LD SKQ+H ++S   + +QG 
Sbjct: 779  STCI---PGLTLAMLNRESICMGPYLLDDNQKLLALGQLLDLSKQQHAMSSFGRKIEQGN 835

Query: 575  LYSLSTELQQRGTTLGSSAAEE 640
              S S+ ++ + + +  S +EE
Sbjct: 836  C-SNSSNIKAQHSFVEPSVSEE 856


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