BLASTX nr result

ID: Coptis21_contig00017572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017572
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316014.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002273322.1| PREDICTED: nucleolar protein 14-like [Vitis ...   149   2e-34
emb|CBI27323.3| unnamed protein product [Vitis vinifera]              141   7e-32
gb|ACG60683.1| unknown protein [Brassica oleracea var. alboglabra]    138   5e-31
ref|XP_004144162.1| PREDICTED: nucleolar protein 14-like [Cucumi...   135   4e-30

>ref|XP_002316014.1| predicted protein [Populus trichocarpa] gi|222865054|gb|EEF02185.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  152 bits (385), Expect = 2e-35
 Identities = 80/114 (70%), Positives = 91/114 (79%), Gaps = 5/114 (4%)
 Frame = +2

Query: 209 NKRSTSKKLLS--GPNVMTMKTKSTSND---SNNPFETIWSRRKFDIIGKKRKGEQQRTG 373
           N +S  KK  S   PN + MK  + S D   S+NPFETIWSRRKFDI+GKKRKGE+ R G
Sbjct: 15  NTKSKKKKKNSRTAPNSVAMKASAASKDNKNSSNPFETIWSRRKFDILGKKRKGEELRIG 74

Query: 374 LARSRGIEKRKGTLLKEYEQSGKSSVFVDKRIGEQNESLGEFDKAILRSQRQRQ 535
           L+R R IEKRK TLLKEYE+SGKSSVF+DKRIGEQNE LGEFDKAI+RSQR+RQ
Sbjct: 75  LSRCRAIEKRKKTLLKEYEESGKSSVFLDKRIGEQNEQLGEFDKAIIRSQRERQ 128


>ref|XP_002273322.1| PREDICTED: nucleolar protein 14-like [Vitis vinifera]
          Length = 973

 Score =  149 bits (377), Expect = 2e-34
 Identities = 78/110 (70%), Positives = 89/110 (80%)
 Frame = +2

Query: 206 KNKRSTSKKLLSGPNVMTMKTKSTSNDSNNPFETIWSRRKFDIIGKKRKGEQQRTGLARS 385
           KNK+    K  S PN + MK K+  +   NPFETIWSR KFDI+GKKRKGEQ+R GLARS
Sbjct: 15  KNKKKKKMKN-SAPNSVAMKLKAPQS---NPFETIWSRTKFDILGKKRKGEQKRIGLARS 70

Query: 386 RGIEKRKGTLLKEYEQSGKSSVFVDKRIGEQNESLGEFDKAILRSQRQRQ 535
           R I+KR  TLLKEYEQS KSSVF+DKRIGEQN++LGEFDKAILRSQR+RQ
Sbjct: 71  RAIQKRNATLLKEYEQSAKSSVFLDKRIGEQNDALGEFDKAILRSQRERQ 120


>emb|CBI27323.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score =  141 bits (355), Expect = 7e-32
 Identities = 68/82 (82%), Positives = 76/82 (92%)
 Frame = +2

Query: 290 NNPFETIWSRRKFDIIGKKRKGEQQRTGLARSRGIEKRKGTLLKEYEQSGKSSVFVDKRI 469
           +NPFETIWSR KFDI+GKKRKGEQ+R GLARSR I+KR  TLLKEYEQS KSSVF+DKRI
Sbjct: 8   SNPFETIWSRTKFDILGKKRKGEQKRIGLARSRAIQKRNATLLKEYEQSAKSSVFLDKRI 67

Query: 470 GEQNESLGEFDKAILRSQRQRQ 535
           GEQN++LGEFDKAILRSQR+RQ
Sbjct: 68  GEQNDALGEFDKAILRSQRERQ 89


>gb|ACG60683.1| unknown protein [Brassica oleracea var. alboglabra]
          Length = 879

 Score =  138 bits (348), Expect = 5e-31
 Identities = 66/98 (67%), Positives = 81/98 (82%)
 Frame = +2

Query: 242 GPNVMTMKTKSTSNDSNNPFETIWSRRKFDIIGKKRKGEQQRTGLARSRGIEKRKGTLLK 421
           GP+ + MK K+   D  NPFE+IWSRRKFD++GKKRKGE++R GL+RSR ++KRK TLLK
Sbjct: 21  GPDAVAMKAKAKKAD--NPFESIWSRRKFDVLGKKRKGEERRVGLSRSRAVDKRKNTLLK 78

Query: 422 EYEQSGKSSVFVDKRIGEQNESLGEFDKAILRSQRQRQ 535
           EYEQS KSSVF+DKRIGE +  LGEFDK ++RSQR RQ
Sbjct: 79  EYEQSLKSSVFMDKRIGEHDNELGEFDKGVIRSQRARQ 116


>ref|XP_004144162.1| PREDICTED: nucleolar protein 14-like [Cucumis sativus]
          Length = 913

 Score =  135 bits (340), Expect = 4e-30
 Identities = 70/107 (65%), Positives = 82/107 (76%)
 Frame = +2

Query: 209 NKRSTSKKLLSGPNVMTMKTKSTSNDSNNPFETIWSRRKFDIIGKKRKGEQQRTGLARSR 388
           +K+   KK  SGP  +TMK    S    NPFE+IWS RKFD++GKKRKGE++R GLARS 
Sbjct: 13  DKKGKKKKKSSGPKALTMKV---SAPKANPFESIWSHRKFDVLGKKRKGEERRIGLARSL 69

Query: 389 GIEKRKGTLLKEYEQSGKSSVFVDKRIGEQNESLGEFDKAILRSQRQ 529
            IEKRK TLLKEYE+S KS+ F DKRIGE +E LGEFDKAILRSQR+
Sbjct: 70  AIEKRKKTLLKEYERSRKSTEFSDKRIGEWDEELGEFDKAILRSQRE 116


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