BLASTX nr result

ID: Coptis21_contig00017559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017559
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521981.1| protein farnesyltransferase alpha subunit, p...   125   4e-27
ref|XP_002319657.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
emb|CBI22374.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002268977.1| PREDICTED: uncharacterized protein LOC100255...   122   4e-26
emb|CAN67402.1| hypothetical protein VITISV_025968 [Vitis vinifera]   122   4e-26

>ref|XP_002521981.1| protein farnesyltransferase alpha subunit, putative [Ricinus
           communis] gi|223538785|gb|EEF40385.1| protein
           farnesyltransferase alpha subunit, putative [Ricinus
           communis]
          Length = 431

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = +3

Query: 27  SLETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSPKSEHA 206
           SLE+EVMKHSKALLLLS DFGTAWNSRKL++ KKQ   +F++ELLLSAL+LSYSPKSE +
Sbjct: 121 SLESEVMKHSKALLLLSCDFGTAWNSRKLILSKKQYMPMFIEELLLSALVLSYSPKSEQS 180

Query: 207 WSHRRWVIKRIDGKCPNFQD 266
           W HRRWVIK I GKC   Q+
Sbjct: 181 WCHRRWVIKMISGKCSTLQE 200


>ref|XP_002319657.1| predicted protein [Populus trichocarpa] gi|222858033|gb|EEE95580.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/80 (73%), Positives = 66/80 (82%)
 Frame = +3

Query: 27  SLETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSPKSEHA 206
           +LE+EVMKHSKALLLLS DFGTAWN RKL+V KKQ   +F+DEL LSAL+LSYSPKSE A
Sbjct: 105 NLESEVMKHSKALLLLSCDFGTAWNFRKLIVSKKQHMLIFLDELFLSALVLSYSPKSEKA 164

Query: 207 WSHRRWVIKRIDGKCPNFQD 266
           W HRRWVIK + GKC   QD
Sbjct: 165 WCHRRWVIKMVAGKCSTMQD 184


>emb|CBI22374.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/79 (75%), Positives = 66/79 (83%)
 Frame = +3

Query: 30  LETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSPKSEHAW 209
           LE+EVMKHS+ALLLLS DFGTAWNSRKLV+ KKQ  S+FMDE LLSAL+LSYSPKSE AW
Sbjct: 172 LESEVMKHSRALLLLSSDFGTAWNSRKLVLSKKQDLSMFMDEFLLSALVLSYSPKSEQAW 231

Query: 210 SHRRWVIKRIDGKCPNFQD 266
           SHRRWVIK I G     Q+
Sbjct: 232 SHRRWVIKMIAGNYTYLQE 250


>ref|XP_002268977.1| PREDICTED: uncharacterized protein LOC100255283 [Vitis vinifera]
          Length = 425

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/79 (75%), Positives = 66/79 (83%)
 Frame = +3

Query: 30  LETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSPKSEHAW 209
           LE+EVMKHS+ALLLLS DFGTAWNSRKLV+ KKQ  S+FMDE LLSAL+LSYSPKSE AW
Sbjct: 117 LESEVMKHSRALLLLSSDFGTAWNSRKLVLSKKQDLSMFMDEFLLSALVLSYSPKSEQAW 176

Query: 210 SHRRWVIKRIDGKCPNFQD 266
           SHRRWVIK I G     Q+
Sbjct: 177 SHRRWVIKMIAGNYTYLQE 195


>emb|CAN67402.1| hypothetical protein VITISV_025968 [Vitis vinifera]
          Length = 742

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/79 (75%), Positives = 66/79 (83%)
 Frame = +3

Query: 30  LETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSPKSEHAW 209
           LE+EVMKHS+ALLLLS DFGTAWNSRKLV+ KKQ  S+FMDE LLSAL+LSYSPKSE AW
Sbjct: 360 LESEVMKHSRALLLLSSDFGTAWNSRKLVLSKKQDLSMFMDEFLLSALVLSYSPKSEQAW 419

Query: 210 SHRRWVIKRIDGKCPNFQD 266
           SHRRWVIK I G     Q+
Sbjct: 420 SHRRWVIKMIAGNYTYLQE 438


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