BLASTX nr result

ID: Coptis21_contig00017557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017557
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_003539623.1| PREDICTED: probable LRR receptor-like serine...   138   5e-31
ref|NP_001238159.1| receptor-like serine/threonine kinase [Glyci...   137   9e-31
ref|XP_002332762.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002334523.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30

>ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|222859912|gb|EEE97459.1|
            predicted protein [Populus trichocarpa]
          Length = 1015

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/103 (67%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    EIVSGKSITNYRPEEEFVCLLDWAMGLQEQGNLLELVDPSLGANFSKKEAMEMLYIGLLC 180
            EIVSGKS TNYRP+EEFV LLDWA  LQEQGNLLELVDP+LG+N+S++EAM ML + LLC
Sbjct: 867  EIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPNLGSNYSEEEAMRMLNLALLC 926

Query: 181  SNRSPTLRPVMSAVVSMLEGHSPVQAPVV-RGSMTDHLILEAF 306
            +N SP+LRP+MS+ VSM+EG  PVQAP+V RG+M +    +AF
Sbjct: 927  TNPSPSLRPLMSSAVSMIEGQIPVQAPIVKRGTMNEEARFKAF 969


>ref|XP_003539623.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like [Glycine max]
          Length = 1007

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/103 (66%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    EIVSGKSITNYRPEEEFVCLLDWAMGLQEQGNLLELVDPSLGANFSKKEAMEMLYIGLLC 180
            EIVSGKS TNYRP+EEFV LLDWA  LQEQGNLLELVDPSLG+ +S +EAM ML + LLC
Sbjct: 862  EIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKYSSEEAMRMLQLALLC 921

Query: 181  SNRSPTLRPVMSAVVSMLEGHSPVQAPVV-RGSMTDHLILEAF 306
            +N SPTLRP MS+VVSML+G +P+QAP++ RG   + +  +AF
Sbjct: 922  TNPSPTLRPCMSSVVSMLDGKTPIQAPIIKRGDSAEDVRFKAF 964


>ref|NP_001238159.1| receptor-like serine/threonine kinase [Glycine max]
            gi|212717161|gb|ACJ37422.1| receptor-like
            serine/threonine kinase [Glycine max]
          Length = 1321

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/92 (72%), Positives = 79/92 (85%)
 Frame = +1

Query: 1    EIVSGKSITNYRPEEEFVCLLDWAMGLQEQGNLLELVDPSLGANFSKKEAMEMLYIGLLC 180
            EIVSGKS TNYRP+EEFV LLDWA  LQEQGNLLELVDPSLG+ +S +EAM ML + LLC
Sbjct: 1150 EIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKYSSEEAMRMLQLALLC 1209

Query: 181  SNRSPTLRPVMSAVVSMLEGHSPVQAPVVRGS 276
            +N SPTLRP MS+VVSMLEG +P+QAP+++ S
Sbjct: 1210 TNPSPTLRPSMSSVVSMLEGKTPIQAPIIKRS 1241


>ref|XP_002332762.1| predicted protein [Populus trichocarpa] gi|222833105|gb|EEE71582.1|
            predicted protein [Populus trichocarpa]
          Length = 872

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/103 (68%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1    EIVSGKSITNYRPEEEFVCLLDWAMGLQEQGNLLELVDPSLGANFSKKEAMEMLYIGLLC 180
            EIVSGKS TNYRP+EEFV LLDWA  LQEQGNLLELVDPSLG+N+SK EA+ ML + LLC
Sbjct: 709  EIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSNYSKTEALRMLNLALLC 768

Query: 181  SNRSPTLRPVMSAVVSMLEGHSPVQAPVV-RGSMTDHLILEAF 306
            +N SPTLRP MS+ V MLEG  PVQAP+V R +M      +AF
Sbjct: 769  TNPSPTLRPSMSSAVKMLEGQIPVQAPIVKRSTMNQDARFKAF 811


>ref|XP_002334523.1| predicted protein [Populus trichocarpa] gi|222872797|gb|EEF09928.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/92 (73%), Positives = 77/92 (83%)
 Frame = +1

Query: 1   EIVSGKSITNYRPEEEFVCLLDWAMGLQEQGNLLELVDPSLGANFSKKEAMEMLYIGLLC 180
           EIVSGKS TNYRP+EEFV LLDWA  LQEQGNLLELVDPSLG+N+SK EA+ ML + LLC
Sbjct: 69  EIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSNYSKTEALRMLNLALLC 128

Query: 181 SNRSPTLRPVMSAVVSMLEGHSPVQAPVVRGS 276
           +N SPTLRP MS+ V MLEG  PVQAP+V+ S
Sbjct: 129 TNPSPTLRPSMSSAVKMLEGQIPVQAPIVKRS 160


Top