BLASTX nr result

ID: Coptis21_contig00017556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017556
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625821.1| Iron-sulfur assembly protein IscA-like prote...   198   2e-48
ref|NP_001237356.1| uncharacterized protein LOC100527785 [Glycin...   197   3e-48
gb|AFK37566.1| unknown [Lotus japonicus]                              197   5e-48
ref|XP_002445380.1| hypothetical protein SORBIDRAFT_07g014910 [S...   196   6e-48
ref|NP_001148399.1| protein aq_1857 [Zea mays] gi|195619024|gb|A...   195   2e-47

>ref|XP_003625821.1| Iron-sulfur assembly protein IscA-like protein [Medicago truncatula]
            gi|355500836|gb|AES82039.1| Iron-sulfur assembly protein
            IscA-like protein [Medicago truncatula]
            gi|388506884|gb|AFK41508.1| unknown [Medicago truncatula]
          Length = 160

 Score =  198 bits (504), Expect = 2e-48
 Identities = 101/155 (65%), Positives = 118/155 (76%), Gaps = 3/155 (1%)
 Frame = -3

Query: 1030 LIHRLTPLISNRIKQNHKIXXXXXXXXXXXXXXXXVHPQSS---QPVCMTDNCIRRLKEL 860
            L  RL PL++ R ++N  I                    SS   +PV +T+NC+R++KEL
Sbjct: 5    LFRRLAPLLAARFQRNQNIISSFSSSSSSSVLHHATSSPSSPDVEPVHITENCVRKMKEL 64

Query: 859  HDKETSTEGKMLRLSVETGGCSGFQYAFFLDDKSNSDDRIFEKDGVKLVVDNISYDFVKG 680
               E+S+ GKMLRLSVETGGCSGFQYAF LDD+ NSDDR+FEK+G+KLVVDNISYDFVKG
Sbjct: 65   DANESSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGIKLVVDNISYDFVKG 124

Query: 679  ATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 575
            ATVDYVEELIRSAF+VTENPSAVGGCSCKSSFMVK
Sbjct: 125  ATVDYVEELIRSAFIVTENPSAVGGCSCKSSFMVK 159


>ref|NP_001237356.1| uncharacterized protein LOC100527785 [Glycine max]
           gi|255633204|gb|ACU16958.1| unknown [Glycine max]
          Length = 156

 Score =  197 bits (501), Expect = 3e-48
 Identities = 94/115 (81%), Positives = 106/115 (92%)
 Frame = -3

Query: 919 PQSSQPVCMTDNCIRRLKELHDKETSTEGKMLRLSVETGGCSGFQYAFFLDDKSNSDDRI 740
           P SS+PV +T NC+RR+KEL   E+ST+GKMLRLSVETGGCSGFQY F LD++ NSDD++
Sbjct: 41  PSSSEPVHITQNCVRRMKELEGSESSTDGKMLRLSVETGGCSGFQYVFNLDNRINSDDKV 100

Query: 739 FEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 575
           FE++GVKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK
Sbjct: 101 FEREGVKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 155


>gb|AFK37566.1| unknown [Lotus japonicus]
          Length = 161

 Score =  197 bits (500), Expect = 5e-48
 Identities = 101/155 (65%), Positives = 116/155 (74%), Gaps = 3/155 (1%)
 Frame = -3

Query: 1030 LIHRLTPLISNRIKQNHKIXXXXXXXXXXXXXXXXVHPQSS---QPVCMTDNCIRRLKEL 860
            L  RL P ++ R +QN K+                    SS   +PV MT+NC+RR+KEL
Sbjct: 6    LFRRLAPSLAARFRQNQKLTSFSSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMKEL 65

Query: 859  HDKETSTEGKMLRLSVETGGCSGFQYAFFLDDKSNSDDRIFEKDGVKLVVDNISYDFVKG 680
               E++T  K LRLSVETGGCSGFQYAF LDD+ NSDDR+FE++G+KLVVDNISYDFVKG
Sbjct: 66   EASESATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVKG 125

Query: 679  ATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 575
            ATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK
Sbjct: 126  ATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 160


>ref|XP_002445380.1| hypothetical protein SORBIDRAFT_07g014910 [Sorghum bicolor]
            gi|241941730|gb|EES14875.1| hypothetical protein
            SORBIDRAFT_07g014910 [Sorghum bicolor]
          Length = 159

 Score =  196 bits (499), Expect = 6e-48
 Identities = 100/152 (65%), Positives = 113/152 (74%)
 Frame = -3

Query: 1030 LIHRLTPLISNRIKQNHKIXXXXXXXXXXXXXXXXVHPQSSQPVCMTDNCIRRLKELHDK 851
            ++ RL  L   R++ NH++                  P  +Q V MT+ C+RRLKELH K
Sbjct: 9    MLRRLAELARGRVRANHRMLSSAFPSTAAIERASQS-PAEAQAVRMTEGCVRRLKELHAK 67

Query: 850  ETSTEGKMLRLSVETGGCSGFQYAFFLDDKSNSDDRIFEKDGVKLVVDNISYDFVKGATV 671
            E S EGKMLRLSVE GGCSGFQY+F LDDK NSDDR+FE DGVKLVVD+ISYDFVKGATV
Sbjct: 68   EPSAEGKMLRLSVEAGGCSGFQYSFALDDKKNSDDRVFETDGVKLVVDDISYDFVKGATV 127

Query: 670  DYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 575
            DY EELIRSAFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 128  DYEEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159


>ref|NP_001148399.1| protein aq_1857 [Zea mays] gi|195619024|gb|ACG31342.1| protein
            aq_1857 [Zea mays] gi|413920986|gb|AFW60918.1| protein
            aq_1857 [Zea mays] gi|413948952|gb|AFW81601.1| protein
            aq_1857 [Zea mays]
          Length = 159

 Score =  195 bits (495), Expect = 2e-47
 Identities = 100/152 (65%), Positives = 114/152 (75%)
 Frame = -3

Query: 1030 LIHRLTPLISNRIKQNHKIXXXXXXXXXXXXXXXXVHPQSSQPVCMTDNCIRRLKELHDK 851
            L+ RL  L S R++ N+++                  P   + V MT+ C+RRLKELH K
Sbjct: 9    LLCRLAELASGRVRANYRMLSSAFSSTASTERVSQS-PAEPEAVLMTEGCVRRLKELHAK 67

Query: 850  ETSTEGKMLRLSVETGGCSGFQYAFFLDDKSNSDDRIFEKDGVKLVVDNISYDFVKGATV 671
            E S+EGKMLRLSVE GGCSGFQY+F LDDK NSDDR+FE DGVKLVVD+ISYDFVKGATV
Sbjct: 68   EPSSEGKMLRLSVEAGGCSGFQYSFALDDKKNSDDRVFETDGVKLVVDDISYDFVKGATV 127

Query: 670  DYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 575
            DY EELIRSAFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 128  DYEEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159


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