BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017553
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADC55379.1| gag-pol polyprotein [Oryza brachyantha]                103   5e-20
emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]         101   2e-19
emb|CAH66529.1| H0502B11.9 [Oryza sativa Indica Group]                100   7e-19
emb|CAH66190.1| OSIGBa0144J05.2 [Oryza sativa Indica Group]           100   7e-19
emb|CAH66117.1| OSIGBa0146N20.2 [Oryza sativa Indica Group]           100   7e-19

>gb|ADC55379.1| gag-pol polyprotein [Oryza brachyantha]
          Length = 1393

 Score =  103 bits (257), Expect = 5e-20
 Identities = 65/182 (35%), Positives = 92/182 (50%), Gaps = 2/182 (1%)
 Frame = +3

Query: 210 PPMA-PLPAQRNAAPIFGNCFNCGRPGHRASACPNGFRAEQGXXXXXXXXXXXXXXXXXX 386
           PP A P PA+++A    G C+NCG PGH A  CP   R+ Q                   
Sbjct: 329 PPTAQPPPARKDAGAKPGVCYNCGDPGHFADKCPKPKRSGQRFVQARVNHVTAEEAQAAP 388

Query: 387 NVA-GIFATSHNSLRVLFDTGASHSFISRQLVEKEHIRTTPLPKPLRVETPLGGSVTLYD 563
            V  G F  +     +LFD+GA+HSFISR+ V    ++   L  P+RV TP G S+    
Sbjct: 389 EVILGTFPVNSVPATILFDSGATHSFISRKFVGMLGLKREKLRDPMRVNTP-GHSMFSDL 447

Query: 564 YCKDFEISFMGREFVVDLVVLGFEGFHFILGMDWLSKNYATLDCAARSVSFSSPGLPRVT 743
           Y     I   G  F+ +L++L  +    ILGMDWL+K+   +DCA R+++ +S     VT
Sbjct: 448 YSPVVPIEIQGTPFLANLILLESKDLDVILGMDWLTKHQGVIDCAKRTITLTSEEGKVVT 507

Query: 744 YE 749
           Y+
Sbjct: 508 YQ 509


>emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]
          Length = 1466

 Score =  101 bits (252), Expect = 2e-19
 Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 5/185 (2%)
 Frame = +3

Query: 210 PPMAPLPAQRNAAPIFGN----CFNCGRPGHRASACPNGFRAEQGXXXXXXXXXXXXXXX 377
           P    LPAQ      FG     CFNC  PGH    CP   RA                  
Sbjct: 374 PAQPALPAQPEQPKKFGEKPELCFNCNEPGHTVGRCPKPRRAGPKFVQARVNHASAEEAQ 433

Query: 378 XXXNVA-GIFATSHNSLRVLFDTGASHSFISRQLVEKEHIRTTPLPKPLRVETPLGGSVT 554
               V  G F       ++LFD+GA+HSFIS++      +    L  P+RV TP GG +T
Sbjct: 434 SAPEVILGTFPVDSTPAKILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP-GGGMT 492

Query: 555 LYDYCKDFEISFMGREFVVDLVVLGFEGFHFILGMDWLSKNYATLDCAARSVSFSSPGLP 734
              YC    +   G  F  +L++L  +    ILGMDWL+++   +DCA+R++  ++    
Sbjct: 493 TTHYCPSVTVEIQGMIFPANLILLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAKGE 552

Query: 735 RVTYE 749
            VT++
Sbjct: 553 VVTFQ 557


>emb|CAH66529.1| H0502B11.9 [Oryza sativa Indica Group]
          Length = 1450

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
 Frame = +3

Query: 216 MAPLPAQRNAAPIFGN----CFNCGRPGHRASACPNGFRAEQGXXXXXXXXXXXXXXXXX 383
           M P PAQ      FG     CFNC  PGH    CP   RA                    
Sbjct: 264 MNPQPAQPEQPKKFGEKPELCFNCNEPGHTVGKCPKPRRAGPKFVQACVNHASAEEAQSA 323

Query: 384 XNVA-GIFATSHNSLRVLFDTGASHSFISRQLVEKEHIRTTPLPKPLRVETPLGGSVTLY 560
             V  G F  +     +LFD+GA+HSFIS++      +    L  P+RV TP GG +T  
Sbjct: 324 PEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTP-GGGMTTT 382

Query: 561 DYCKDFEISFMGREFVVDLVVLGFEGFHFILGMDWLSKNYATLDCAARSVSFSSPGLPRV 740
            YC    +   G  F  +L++L  +    ILGMDWL+++   +DCA+R++  ++     V
Sbjct: 383 HYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAKGEVV 442

Query: 741 TYE 749
           T++
Sbjct: 443 TFQ 445


>emb|CAH66190.1| OSIGBa0144J05.2 [Oryza sativa Indica Group]
          Length = 1827

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 72/209 (34%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
 Frame = +3

Query: 207  RPPMAPL----PAQRN----AAPIFGNCFNCGRPGHRASACPNGFRAEQGXXXXXXXXXX 362
            RPPMAP     PAQ      A P  G+CFNCG  GH A  CP   RA             
Sbjct: 636  RPPMAPAQSAQPAQAKKETGAKP--GSCFNCGELGHFADKCPKPRRAGPRFIQARVNHAS 693

Query: 363  XXXXXXXXNVA-GIFATSHNSLRVLFDTGASHSFISRQLVEKEHIRTTPLPKPLRVETPL 539
                     V  G F  +     VLFD+GA+HSFIS++ V    +R   L  P+RV TP 
Sbjct: 694  AEEAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKDELSTPMRVRTP- 752

Query: 540  GGSVTLYDYCKDFEISFMGREFVVDLVVLGFEGFHFILGMDWLSKNYATLDCAARSVSFS 719
            G S T   +     I      F+ +L++L  +    ILGMDWL+K    +DCA+R+V+ +
Sbjct: 753  GNSSTSVSFSPSVLIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDCASRTVTLT 812

Query: 720  SPGLPRVTYECGTRGDSVMSSFLYSVEIP 806
            +     V Y+        +S      EIP
Sbjct: 813  NEKGETVVYKSPDSPKQGVSLNQIETEIP 841


>emb|CAH66117.1| OSIGBa0146N20.2 [Oryza sativa Indica Group]
          Length = 1521

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 66/188 (35%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
 Frame = +3

Query: 207 RPPMAPL----PAQ--RNAAPIFGNCFNCGRPGHRASACPNGFRAEQGXXXXXXXXXXXX 368
           RPPMAP     PAQ  +      G+CFNCG  GH A  CP   RA               
Sbjct: 330 RPPMAPAQSGQPAQAKKETGTKPGSCFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE 389

Query: 369 XXXXXXNVA-GIFATSHNSLRVLFDTGASHSFISRQLVEKEHIRTTPLPKPLRVETPLGG 545
                  V  G F  +     VLFD+GA+HSFIS++ V    +    L  P+RV TP G 
Sbjct: 390 EAQAAPKVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMHGLIREELSTPMRVHTP-GN 448

Query: 546 SVTLYDYCKDFEISFMGREFVVDLVVLGFEGFHFILGMDWLSKNYATLDCAARSVSFSSP 725
           S T   +     I      F+ +L++L  +G   ILGMDWL+K    +DCA R+V+ ++ 
Sbjct: 449 SSTSVQFSPSITIEIQRSPFLANLILLDSKGLDVILGMDWLTKFKGVIDCANRTVTLTNE 508

Query: 726 GLPRVTYE 749
               V Y+
Sbjct: 509 KGETVVYK 516