BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017552
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    72   9e-12
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    67   1e-11
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    58   1e-08
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    53   1e-06

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 72.4 bits (176), Expect(2) = 9e-12
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
 Frame = -3

Query: 822 CL*HWISFENVEKFYSLYIVFSDVGQEEFGAIKPPAYAEGETEYKDMFKSLGVVGGCLCF 643
           CL HWI  +  +   S +I   + G+E F  +  P +     + +     LGV+GGCL F
Sbjct: 235 CL-HWIVNDPSK---SEFIYCLEFGRELFQPVAAPPHLGPNDKDRTGDMMLGVLGGCLYF 290

Query: 642 IDGNFDGHVEIWVMNNYGVEESWARQYMLRQELCGSLWHGG--RQVIKLRNGVLLLTQDR 469
            D       +IWVM  YGV+ESW ++++L+      +W+    R +  L NG +L++   
Sbjct: 291 FDYPLGDSFDIWVMKQYGVQESWTKEFILKNPSTDIIWYWDLYRPISLLSNGEILMSHKS 350

Query: 468 NEIGYYNHNEDTFRPIKINSVPRRRAYRVIVQMGSLFSPQNV 343
             +  YN  + +FR +KI  +    A   +    S  SP+ +
Sbjct: 351 KAMVSYNPEDRSFRFLKIYGIQNFEANPYV---PSFLSPREI 389



 Score = 24.3 bits (51), Expect(2) = 9e-12
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 913 KAEAEIYTLGSKNWRGI 863
           K EAEI+TLG   W  I
Sbjct: 198 KLEAEIHTLGKGTWTSI 214


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 67.0 bits (162), Expect(2) = 1e-11
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = -3

Query: 813 HWISFENVEKFYSLYIVFSDVGQEEFGAIKPPAYAEGETEYKDMFKSLGVVGGCLCFIDG 634
           HW+  EN E   +  +V  D+G E++  +  P Y +     K+ +  LGV+ GCLCF+  
Sbjct: 215 HWVVGENPESNVANIVVALDLGVEDYREVLQPEYKD-----KNFYIDLGVLRGCLCFLAN 269

Query: 633 NFDGHVEIWVMNNYGVEESWARQYMLRQ-ELCGSL 532
                V++W+M  YGV+ESW + + + Q E+ G L
Sbjct: 270 FLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFL 304



 Score = 28.9 bits (63), Expect(2) = 1e-11
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 922 RCFKAEAEIYTLGSKNWRGIEHVPY 848
           R F++E ++Y+L  ++WR I  +PY
Sbjct: 174 RSFESEVKVYSLRKQSWRRIGDMPY 198


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 58.2 bits (139), Expect(2) = 1e-08
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 17/168 (10%)
 Frame = -3

Query: 813 HWISFENVEKFYSLYIVFSDVGQEEFGAI-KPPAYAEGETEYKDMFKSLGVVGGCLCFID 637
           HW++     ++ + +IV  D+  E+F  I KP         Y      L V+GGCL    
Sbjct: 242 HWVT--RPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYH-----LLVLGGCLSAAV 294

Query: 636 GNFDGHVEIWVMNNYGVEESWARQYMLRQELCGSL----------W------HGGRQVIK 505
              +G +E+WVM  Y V+ESW +++ +   L   L          W       G R +  
Sbjct: 295 HRSNGKLEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCL 354

Query: 504 LRNGVLLLTQDRNEIGYYNHNEDTFRPIKINSVPRRRAYRVIVQMGSL 361
           L+NG +LL      +  YN     F+ + +  +P    ++  V +GSL
Sbjct: 355 LKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLP--NWFQTFVHVGSL 400



 Score = 28.1 bits (61), Expect(2) = 1e-08
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 919 CFKAEAEIYTLGSKNWRGIEHVPY 848
           C ++E ++ TLGS  WR +  V Y
Sbjct: 203 CSQSEVQVLTLGSPTWRSLGKVSY 226


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
 Frame = -3

Query: 768 IVFSDVGQEEFGAIKPPAYAEGETEYKDMFKSLGVVGGCLCFIDGNFDGHVEIWVMNNYG 589
           IV  D+G EEF  I  P Y+  E E      ++GV+GGCLC         VEIWVM  YG
Sbjct: 240 IVAFDLGAEEFKIIPQPDYSSNEHEM-----NVGVLGGCLCVFCNKNCKQVEIWVMKEYG 294

Query: 588 VEESWARQ-YMLRQELCGSLWHGGRQVIKLRNG-VLLLTQDRNEIGYYNHNEDTFRPIKI 415
           V+ESW     ++ Q    + W   R +   + G  +LL  D     +Y+      + I+I
Sbjct: 295 VKESWTHLCTVIAQLQVKAFWLHARPLAYSKGGDKILLELDNRFFVWYDLRRRKSKIIRI 354

Query: 414 NSVP 403
              P
Sbjct: 355 RGAP 358


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 52.8 bits (125), Expect(2) = 1e-06
 Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
 Frame = -3

Query: 813 HWISFENVEKFYSLYIVFSDVGQEEFGAIKPPAYAEGETEYKDMFKSLGVVGGCLCFIDG 634
           HW+  ++ +   +  IV  D+G E++  +  P + +           +GV+ GCL  +  
Sbjct: 208 HWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNCNM-----GVGVLQGCLSLLAY 262

Query: 633 NFDGHVEIWVMNNYGVEESWARQY-MLRQELCGSLWHGGRQVIKLRNGVLLLTQDRNEIG 457
                V++WVM  Y V+ESW++ + + R E+ G L              +L+  D   + 
Sbjct: 263 ARSERVDVWVMEEYMVKESWSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHDNVNLF 322

Query: 456 YYNHNEDTFRPIKINSVPRRRAYRVIVQMGSLFSPQNVHMLRKR 325
           +Y+        + I  VP    +   + +GSL  P N + LR+R
Sbjct: 323 WYDLKRKEVVNVWIQGVP--ITFEAEICVGSLV-PLNANRLRRR 363



 Score = 26.2 bits (56), Expect(2) = 1e-06
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 922 RCFKAEAEIYTLGSKNWRGIEHVPY 848
           + F++E ++++L   +WR I  +PY
Sbjct: 167 KSFESEVKVFSLRKNSWRRIADMPY 191