BLASTX nr result

ID: Coptis21_contig00017542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017542
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566872.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   300   6e-80
ref|XP_003555172.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   296   9e-79
ref|XP_003529496.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   296   9e-79
dbj|BAE71196.1| putative hydroxymethylglutaryl-CoA lyase [Trifol...   296   1e-78
gb|ACG45252.1| hydroxymethylglutaryl-CoA lyase [Zea mays]             294   6e-78

>ref|XP_003566872.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Brachypodium distachyon]
          Length = 443

 Score =  300 bits (769), Expect = 6e-80
 Identities = 145/167 (86%), Positives = 158/167 (94%)
 Frame = +1

Query: 4   VAVRGYVSCVVGCPVEGSVPPSKVAYVAKELYDMGCSEISLGDTIGVGTPGTVVPMLEAV 183
           + VRGYVSCVVGCPVEGSVPPS VAYVAKELYDMGC E+SLGDTIGVGTPGTVVPMLEAV
Sbjct: 273 IPVRGYVSCVVGCPVEGSVPPSNVAYVAKELYDMGCYEVSLGDTIGVGTPGTVVPMLEAV 332

Query: 184 MAVVPLEKLAVHFHDTYGQSLSNILASLQMGIGIVDSSVAGLGGCPYAKGAFGNVATEDV 363
           M+VVP+EKLAVHFHDTYGQSLSNIL SLQMG+ +VDSSVAGLGGCPYAKGA GNVATEDV
Sbjct: 333 MSVVPVEKLAVHFHDTYGQSLSNILISLQMGVNVVDSSVAGLGGCPYAKGASGNVATEDV 392

Query: 364 VYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITSD 504
           VYML+GLG+KT VDLGK+MSAGEFICKHLGR SGSKAA+ALS +T++
Sbjct: 393 VYMLHGLGIKTGVDLGKVMSAGEFICKHLGRQSGSKAAIALSNVTAN 439


>ref|XP_003555172.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Glycine max]
          Length = 435

 Score =  296 bits (759), Expect = 9e-79
 Identities = 149/168 (88%), Positives = 153/168 (91%)
 Frame = +1

Query: 1   SVAVRGYVSCVVGCPVEGSVPPSKVAYVAKELYDMGCSEISLGDTIGVGTPGTVVPMLEA 180
           S+ VRGYVSCVVGCPVEG +PPSKVAYVAKELYDMGC EISLGDTIGVGTPGTVVPML A
Sbjct: 264 SIPVRGYVSCVVGCPVEGPIPPSKVAYVAKELYDMGCFEISLGDTIGVGTPGTVVPMLLA 323

Query: 181 VMAVVPLEKLAVHFHDTYGQSLSNILASLQMGIGIVDSSVAGLGGCPYAKGAFGNVATED 360
           VMAVVP EKLAVHFHDTYGQSL NIL SLQMGI  VDSSVAGLGGCPYAKGA GNVATED
Sbjct: 324 VMAVVPAEKLAVHFHDTYGQSLPNILVSLQMGISAVDSSVAGLGGCPYAKGASGNVATED 383

Query: 361 VVYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITSD 504
           VVYMLNGLGVKTNVDLGKLM AGEFI KHLGR SGSK AVA SR+T+D
Sbjct: 384 VVYMLNGLGVKTNVDLGKLMLAGEFIGKHLGRPSGSKTAVAFSRVTAD 431


>ref|XP_003529496.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Glycine max]
          Length = 433

 Score =  296 bits (759), Expect = 9e-79
 Identities = 147/168 (87%), Positives = 154/168 (91%)
 Frame = +1

Query: 1   SVAVRGYVSCVVGCPVEGSVPPSKVAYVAKELYDMGCSEISLGDTIGVGTPGTVVPMLEA 180
           S+ VRGYVSCVVGCPVEG +PPS+VAYVAKELYDMGC EISLGDTIGVGTPGTVVPML A
Sbjct: 262 SIPVRGYVSCVVGCPVEGPIPPSRVAYVAKELYDMGCFEISLGDTIGVGTPGTVVPMLLA 321

Query: 181 VMAVVPLEKLAVHFHDTYGQSLSNILASLQMGIGIVDSSVAGLGGCPYAKGAFGNVATED 360
           VMAVVP EKLAVHFHDTYGQSL+NIL SLQMGI  VDSSVAGLGGCPYAKGA GNVATED
Sbjct: 322 VMAVVPAEKLAVHFHDTYGQSLANILVSLQMGISAVDSSVAGLGGCPYAKGASGNVATED 381

Query: 361 VVYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITSD 504
           VVYMLNGLGVKTNVDLGKLMSAGEFI KHLGR SGSK  +A SR+T+D
Sbjct: 382 VVYMLNGLGVKTNVDLGKLMSAGEFIGKHLGRPSGSKTTIAFSRVTAD 429


>dbj|BAE71196.1| putative hydroxymethylglutaryl-CoA lyase [Trifolium pratense]
          Length = 433

 Score =  296 bits (758), Expect = 1e-78
 Identities = 149/168 (88%), Positives = 155/168 (92%)
 Frame = +1

Query: 1   SVAVRGYVSCVVGCPVEGSVPPSKVAYVAKELYDMGCSEISLGDTIGVGTPGTVVPMLEA 180
           S+ VRGYVSCVVGCPVEGSV PSKVAYVAKELYDMGC EISLGDTIGVGTPGTVVPML A
Sbjct: 262 SIPVRGYVSCVVGCPVEGSVSPSKVAYVAKELYDMGCFEISLGDTIGVGTPGTVVPMLLA 321

Query: 181 VMAVVPLEKLAVHFHDTYGQSLSNILASLQMGIGIVDSSVAGLGGCPYAKGAFGNVATED 360
           VMAVVP EKLAVHFHDTYGQSLSNIL SLQMGI  VDSSVAGLGGCPYAKGA GNVATED
Sbjct: 322 VMAVVPTEKLAVHFHDTYGQSLSNILVSLQMGISAVDSSVAGLGGCPYAKGASGNVATED 381

Query: 361 VVYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITSD 504
           VVYMLNGLGVKTNVD+ KLMSAG+FI KHLGR SGSK A+ALSR+T+D
Sbjct: 382 VVYMLNGLGVKTNVDIEKLMSAGDFIGKHLGRPSGSKTAIALSRVTAD 429


>gb|ACG45252.1| hydroxymethylglutaryl-CoA lyase [Zea mays]
          Length = 435

 Score =  294 bits (752), Expect = 6e-78
 Identities = 141/167 (84%), Positives = 156/167 (93%)
 Frame = +1

Query: 4   VAVRGYVSCVVGCPVEGSVPPSKVAYVAKELYDMGCSEISLGDTIGVGTPGTVVPMLEAV 183
           + VRGYVSCVVGCPV+G VPPS VAYVAKELYDMGC E+SLGDTIGVGTPGTVVPMLEA 
Sbjct: 265 IPVRGYVSCVVGCPVDGPVPPSNVAYVAKELYDMGCYEVSLGDTIGVGTPGTVVPMLEAA 324

Query: 184 MAVVPLEKLAVHFHDTYGQSLSNILASLQMGIGIVDSSVAGLGGCPYAKGAFGNVATEDV 363
           ++VVP+EKLAVHFHDTYGQSLSNIL SLQMG+ +VDSSVAGLGGCPYAKGA GNVATEDV
Sbjct: 325 ISVVPVEKLAVHFHDTYGQSLSNILISLQMGVSVVDSSVAGLGGCPYAKGASGNVATEDV 384

Query: 364 VYMLNGLGVKTNVDLGKLMSAGEFICKHLGRASGSKAAVALSRITSD 504
           VYMLNGLGVKT VDLGK+M+AGEFIC+HLGR SGSKAA ALS++T++
Sbjct: 385 VYMLNGLGVKTGVDLGKVMAAGEFICRHLGRQSGSKAATALSKVTAN 431


Top