BLASTX nr result
ID: Coptis21_contig00017539
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017539 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|2... 123 2e-26 ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|2... 122 2e-26 ref|XP_002520966.1| RNA binding protein, putative [Ricinus commu... 110 1e-22 emb|CBI21002.3| unnamed protein product [Vitis vinifera] 80 2e-13 ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264... 80 2e-13 >ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|222857065|gb|EEE94612.1| predicted protein [Populus trichocarpa] Length = 379 Score = 123 bits (308), Expect = 2e-26 Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 1/148 (0%) Frame = +2 Query: 2 VEVLKRE-E*CESWFPSIIISADRYTCTVRYDLVLNSEGDPIVEDVCKEDVRPYPQPVNG 178 VEVL+R+ E C SWFP ++SA C +RY V +++G+P++E V +EDVRP P P Sbjct: 9 VEVLRRDHEPCGSWFPGSVVSARGNYCKIRYKSVSDNKGEPVMEKVREEDVRPQP-PHKK 67 Query: 179 REEWVVGDTTEAFDLHCWRXXXXXXXXXXXXXXIRLSGSIQLKGFQRANLRVQHAWQNNK 358 R+ W+VGD E FD CWR +RL GSIQLK F +++R+Q AW NN Sbjct: 68 RKRWMVGDVAEIFDFQCWREGKIAKVLNNNLFVVRLFGSIQLKEFHESSIRIQQAWHNNN 127 Query: 359 WVVTGKVGEQLLPEHEHHEDAGTRKNSG 442 W V GKV + + EH K+SG Sbjct: 128 WSVIGKVTQNI--EHSKKCAENKSKHSG 153 >ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|222842538|gb|EEE80085.1| predicted protein [Populus trichocarpa] Length = 394 Score = 122 bits (307), Expect = 2e-26 Identities = 60/127 (47%), Positives = 79/127 (62%), Gaps = 1/127 (0%) Frame = +2 Query: 2 VEVLKRE-E*CESWFPSIIISADRYTCTVRYDLVLNSEGDPIVEDVCKEDVRPYPQPVNG 178 VEVL+RE E C SWFP+ ++SA C +RY+ ++ G+P++E V KEDVRP P P Sbjct: 9 VEVLRREHESCGSWFPASVVSARGNYCKIRYESHSDNNGEPVMEKVHKEDVRPQP-PHKK 67 Query: 179 REEWVVGDTTEAFDLHCWRXXXXXXXXXXXXXXIRLSGSIQLKGFQRANLRVQHAWQNNK 358 R+ W+VGD E FD CWR +RL GSIQLK F +N+R+Q AW++N Sbjct: 68 RKRWIVGDVAEIFDFQCWREGKIAKVLKNNLFVVRLFGSIQLKEFHESNIRIQQAWRSNN 127 Query: 359 WVVTGKV 379 W V GKV Sbjct: 128 WSVIGKV 134 >ref|XP_002520966.1| RNA binding protein, putative [Ricinus communis] gi|223539803|gb|EEF41383.1| RNA binding protein, putative [Ricinus communis] Length = 383 Score = 110 bits (275), Expect = 1e-22 Identities = 65/152 (42%), Positives = 81/152 (53%), Gaps = 6/152 (3%) Frame = +2 Query: 2 VEVLKR-EE*CESWFPSIIISADRYTCTVRYDLVLNSEGDPIVEDVCKEDVRPYPQPVNG 178 VEV KR E C SWFP +IS D VRY L+ + EG+P++E V KEDVRP P P Sbjct: 9 VEVFKRVHEPCGSWFPGYLISVDGDCYIVRYYLLADPEGEPVIEKVHKEDVRPQP-PSKR 67 Query: 179 REEWVVGDTTEAFDLHCWR-XXXXXXXXXXXXXXIRLSGSIQLKGFQRANLRVQHAWQNN 355 ++ W+VGD E FD+ WR IRL GSIQLK F + LR+ W N Sbjct: 68 KKRWMVGDVAEVFDIQRWRFGKIVKVLKNNDLFVIRLFGSIQLKEFHESKLRIHQTWNKN 127 Query: 356 KWVVTGKVGEQLLPEHEHHED----AGTRKNS 439 KW V KV + P E E+ +G+ NS Sbjct: 128 KWSVMEKVAQNKEPTKESTENESKLSGSLSNS 159 >emb|CBI21002.3| unnamed protein product [Vitis vinifera] Length = 386 Score = 79.7 bits (195), Expect = 2e-13 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Frame = +2 Query: 2 VEVL-KREE*CESWFPSIIISADRYTCTVRYDLVLNSEGDPIVEDVCKEDVRPYPQPVNG 178 VEVL K+E +W + IIS + + +VRYD L V+ V ++ +RP P PV G Sbjct: 9 VEVLNKKEVPSGAWHCAEIISGNGHNYSVRYDSYLGMTNKANVDRVSRKAIRPCPLPVKG 68 Query: 179 REEWVVGDTTEAFDLHCWRXXXXXXXXXXXXXXIRLSGSIQLKGFQRANLRVQHAWQNNK 358 E WV GD E F+ W+ +RL GS ++N+RV+ AW ++K Sbjct: 69 MESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHEFEVHKSNIRVRQAWIDDK 128 Query: 359 WVVTGK 376 WVV G+ Sbjct: 129 WVVIGQ 134 >ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264564 [Vitis vinifera] Length = 440 Score = 79.7 bits (195), Expect = 2e-13 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Frame = +2 Query: 2 VEVL-KREE*CESWFPSIIISADRYTCTVRYDLVLNSEGDPIVEDVCKEDVRPYPQPVNG 178 VEVL K+E +W + IIS + + +VRYD L V+ V ++ +RP P PV G Sbjct: 9 VEVLNKKEVPSGAWHCAEIISGNGHNYSVRYDSYLGMTNKANVDRVSRKAIRPCPLPVKG 68 Query: 179 REEWVVGDTTEAFDLHCWRXXXXXXXXXXXXXXIRLSGSIQLKGFQRANLRVQHAWQNNK 358 E WV GD E F+ W+ +RL GS ++N+RV+ AW ++K Sbjct: 69 MESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHEFEVHKSNIRVRQAWIDDK 128 Query: 359 WVVTGK 376 WVV G+ Sbjct: 129 WVVIGQ 134