BLASTX nr result

ID: Coptis21_contig00017538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017538
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854...   292   1e-76
emb|CBI18930.3| unnamed protein product [Vitis vinifera]              285   9e-75
ref|XP_002307747.1| predicted protein [Populus trichocarpa] gi|2...   270   3e-70
ref|NP_001235579.1| uncharacterized protein LOC100500267 precurs...   260   4e-67
ref|XP_002510591.1| conserved hypothetical protein [Ricinus comm...   258   1e-66

>ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854733 [Vitis vinifera]
          Length = 234

 Score =  292 bits (747), Expect = 1e-76
 Identities = 148/226 (65%), Positives = 175/226 (77%), Gaps = 5/226 (2%)
 Frame = +3

Query: 114 LLLSLAVVV-----GISSGLSIPAEFDGFVYSQQQGAAGTIAIEAFFDPICPDSRDAWPP 278
           LLLSL +        I   +SIPA+FDGFVY+       +I IEAFFDP+CPDSRDAWPP
Sbjct: 12  LLLSLVLFYVFEHESIVRAVSIPAKFDGFVYNYTGTGIDSIIIEAFFDPVCPDSRDAWPP 71

Query: 279 LKRALQHYPSSRVSLIVHPFALPYHDNSFVACRALHVVNKLNSSATYDMLELFFKHQENF 458
           LKRA+ +Y + RVSLIVHPFALPYHDN+F   RALH+VNKLNSSATY +LE+ FKHQE F
Sbjct: 72  LKRAIAYY-APRVSLIVHPFALPYHDNAFATSRALHIVNKLNSSATYHLLEMLFKHQEIF 130

Query: 459 YNGPTRNMSRDSVLNHVVKLVVEAVGNSSLSAVKSNFSDRQTDLTTRISFKYGCTRGVYG 638
           YN  T NMSR ++++ +VK V +AVG S  SA+KS FSDRQTDLTTR+SFKYGC+RGV G
Sbjct: 131 YNQITVNMSRTAIVDCIVKFVSKAVGESLFSAIKSGFSDRQTDLTTRVSFKYGCSRGVLG 190

Query: 639 TPYFFVNGFSLPDAGSAIDYKGWRSILDPLVNSQKQLREESLPFFL 776
           TPYFFVNGF LPD GSAI+Y  WRSILDPLV+    ++ E+L FFL
Sbjct: 191 TPYFFVNGFPLPDPGSAINYSKWRSILDPLVSD--SVKRETLHFFL 234


>emb|CBI18930.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  285 bits (730), Expect = 9e-75
 Identities = 145/222 (65%), Positives = 172/222 (77%), Gaps = 7/222 (3%)
 Frame = +3

Query: 114 LLLSLAVVV-----GISSGLSIPAEFDGFVYSQQQGAAGTIAIEAFFDPICPDSRDAWPP 278
           LLLSL +        I   +SIPA+FDGFVY+       +I IEAFFDP+CPDSRDAWPP
Sbjct: 12  LLLSLVLFYVFEHESIVRAVSIPAKFDGFVYNYTGTGIDSIIIEAFFDPVCPDSRDAWPP 71

Query: 279 LKRALQHYPSSRVSLIVHPFALPYHDNSFVACRALHVVNKLNSSATYDMLELFFKHQENF 458
           LKRA+ +Y + RVSLIVHPFALPYHDN+F   RALH+VNKLNSSATY +LE+ FKHQE F
Sbjct: 72  LKRAIAYY-APRVSLIVHPFALPYHDNAFATSRALHIVNKLNSSATYHLLEMLFKHQEIF 130

Query: 459 YNGPTRNMSRDSVLNHVVKLVVEAVGNSSLSAVKSNFSDRQTDLTTRISFKYGCTRGVYG 638
           YN  T NMSR ++++ +VK V +AVG S  SA+KS FSDRQTDLTTR+SFKYGC+RGV G
Sbjct: 131 YNQITVNMSRTAIVDCIVKFVSKAVGESLFSAIKSGFSDRQTDLTTRVSFKYGCSRGVLG 190

Query: 639 TPYFFVNGFSLPDAGSAIDYKGWRSILDPL--VNSQKQLREE 758
           TPYFFVNGF LPD GSAI+Y  WRSILDPL  +N   +LR++
Sbjct: 191 TPYFFVNGFPLPDPGSAINYSKWRSILDPLPFLNIGPKLRQK 232


>ref|XP_002307747.1| predicted protein [Populus trichocarpa] gi|222857196|gb|EEE94743.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  270 bits (691), Expect = 3e-70
 Identities = 126/204 (61%), Positives = 157/204 (76%)
 Frame = +3

Query: 165 PAEFDGFVYSQQQGAAGTIAIEAFFDPICPDSRDAWPPLKRALQHYPSSRVSLIVHPFAL 344
           PA +DGFVY  +QG   +I +EAFFDP+CPDSRD+WPPLK AL+HY  SRV L+VH   L
Sbjct: 11  PARYDGFVYENRQGDLNSILVEAFFDPVCPDSRDSWPPLKEALKHY-GSRVWLVVHLLPL 69

Query: 345 PYHDNSFVACRALHVVNKLNSSATYDMLELFFKHQENFYNGPTRNMSRDSVLNHVVKLVV 524
           PYHDN+FV+CRALH+ N LNSS T+ +LE FFKHQE FYN  T N+S+ S++  +VK   
Sbjct: 70  PYHDNAFVSCRALHIANTLNSSFTFPLLEEFFKHQEKFYNAKTSNLSKTSIVEEIVKFAT 129

Query: 525 EAVGNSSLSAVKSNFSDRQTDLTTRISFKYGCTRGVYGTPYFFVNGFSLPDAGSAIDYKG 704
            AVGNS  SA +S F+DRQTDL TR+SFKY  +RGV+GTP+FFVNGF LPDAGS +DY G
Sbjct: 130 VAVGNSYSSAFESGFNDRQTDLKTRVSFKYSTSRGVFGTPFFFVNGFVLPDAGSPLDYNG 189

Query: 705 WRSILDPLVNSQKQLREESLPFFL 776
           WRSI+DPLV + K  +  ++P F+
Sbjct: 190 WRSIIDPLVGA-KSSQSINVPHFI 212


>ref|NP_001235579.1| uncharacterized protein LOC100500267 precursor [Glycine max]
           gi|255629877|gb|ACU15289.1| unknown [Glycine max]
          Length = 236

 Score =  260 bits (664), Expect = 4e-67
 Identities = 122/221 (55%), Positives = 162/221 (73%), Gaps = 4/221 (1%)
 Frame = +3

Query: 126 LAVVVGISSGLSIPAEFDGFVYSQQQ-GAAGTIAIEAFFDPICPDSRDAWPPLKRALQHY 302
           L +++G+ +    P+ FDGFVY +       T+ IEAF+DP+CPDSRD+WPPLK+AL HY
Sbjct: 17  LFILLGVGADYIPPSRFDGFVYGKGNLNLLDTVLIEAFYDPVCPDSRDSWPPLKQALHHY 76

Query: 303 PSSRVSLIVHPFALPYHDNSFVACRALHVVNKLNSSATYDMLELFFKHQENFYNGPTRNM 482
            +SRVSL++H   LPYHDN+FV  RALH+VN LN+SAT+ +LE FF++QENFY   TRN+
Sbjct: 77  -ASRVSLLLHLLPLPYHDNAFVTSRALHIVNNLNASATFPLLEWFFRYQENFYGAQTRNL 135

Query: 483 SRDSVLNHVVKLVVEAVGNSSLSAVKSNFSDRQTDLTTRISFKYGCTRGVYGTPYFFVNG 662
           SR S++  VVK   + VG+S    +K+ F+D  TD+ TR+SFKY  +RGVYGTP+F+VNG
Sbjct: 136 SRASIIEEVVKSATQVVGSSYYKTIKNGFNDTTTDIQTRVSFKYAASRGVYGTPFFYVNG 195

Query: 663 FSLPDAGSAIDYKGWRSILDPLV---NSQKQLREESLPFFL 776
           F LPD G+A+DYK WR ++DPLV   N +    EESL FFL
Sbjct: 196 FLLPDTGAAVDYKTWRKVIDPLVGAKNKKSIQNEESLHFFL 236


>ref|XP_002510591.1| conserved hypothetical protein [Ricinus communis]
           gi|223551292|gb|EEF52778.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  258 bits (660), Expect = 1e-66
 Identities = 126/225 (56%), Positives = 164/225 (72%), Gaps = 8/225 (3%)
 Frame = +3

Query: 114 LLLSLAVVVGISS-GLSI----PAEFDGFVYSQQ---QGAAGTIAIEAFFDPICPDSRDA 269
           L+L  A V+ +S  GL      PA +DGF+Y +    +  A TI IEAFFDP+CPDSRD+
Sbjct: 6   LILLFAFVINVSKWGLDAQKLPPARYDGFLYEKHGPCRHHADTILIEAFFDPVCPDSRDS 65

Query: 270 WPPLKRALQHYPSSRVSLIVHPFALPYHDNSFVACRALHVVNKLNSSATYDMLELFFKHQ 449
           WPPLK+AL HY  SR SL++H   LPYHDN++VA RALH+ N LN S+T+ +LE FFKHQ
Sbjct: 66  WPPLKQAL-HYYGSRTSLLLHLLPLPYHDNAYVASRALHIANNLNHSSTFPLLERFFKHQ 124

Query: 450 ENFYNGPTRNMSRDSVLNHVVKLVVEAVGNSSLSAVKSNFSDRQTDLTTRISFKYGCTRG 629
           E FYN  TRN+SR SV+  +V+    A+GNS  SA++S F+DR+TDL TR+SFKY  +RG
Sbjct: 125 ERFYNAQTRNLSRVSVVKDIVEFASVAIGNSYHSAIESGFNDRETDLQTRVSFKYSTSRG 184

Query: 630 VYGTPYFFVNGFSLPDAGSAIDYKGWRSILDPLVNSQKQLREESL 764
           V+GTP F++NGF LPDAGS +DY GWR  +DPL+N++K   EE +
Sbjct: 185 VFGTPTFYINGFVLPDAGSTLDYNGWRKFIDPLINAKKGKSEEHM 229


Top