BLASTX nr result
ID: Coptis21_contig00017536
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017536 (1404 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI40152.3| unnamed protein product [Vitis vinifera] 622 e-176 ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 622 e-176 ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 605 e-170 ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 605 e-170 ref|XP_002299208.1| RNA polymerase IV subunit [Populus trichocar... 605 e-170 >emb|CBI40152.3| unnamed protein product [Vitis vinifera] Length = 1890 Score = 622 bits (1604), Expect = e-176 Identities = 305/467 (65%), Positives = 371/467 (79%), Gaps = 1/467 (0%) Frame = -2 Query: 1403 EGYILQKLPVPPNCLSIPEXXXXXXXXXXXXXXXILRKVLKQAEIIKSSRSGHPNFESHK 1224 +GYILQ LPVPPNCLS+P+ +L+KVLKQ E+IK SRSG PNFESHK Sbjct: 264 DGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHK 323 Query: 1223 VEVNDLQSTVAEYFLARGTAKDSRDIKMS-GIRKEVGDYATKAWFEKMKTFFISKGSGYS 1047 +E N+LQS++ +Y RGTAK SR + G KE + +TKAW EKM+T FI KGSG+S Sbjct: 324 IEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEPNESSTKAWLEKMRTLFIRKGSGFS 383 Query: 1046 SRSVISGDAYKRVNEIGLPLEIAQRITFEEKVTERNKVHLQELVDKKLCLTYSDGASMYS 867 SRSVI+GDAYKRVNEIGLP EIAQRITFEE+V N HLQ LVD+KLCLTY DG S YS Sbjct: 384 SRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYS 443 Query: 866 LREGSKGHTILRVGQVVHRRIMDGDVVFINRPPSTHKHSLQALSVYVHEDHTVKINPLIC 687 LREGSKGHT LR GQVVHRRIMDGD+VFINRPP+THKHSLQALSVYVH+DHTVKINPLIC Sbjct: 444 LREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC 503 Query: 686 GPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLKIMF 507 GPL ADFDGDC+H+FYPQSL A+AEVLELFSVE+QLLSSH+G+LNLQLA D+LLSLK++F Sbjct: 504 GPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLF 563 Query: 506 KNFFFDKATAQQLAMFVSTNLPQPTLLKAFSVGSQWTALQILQSVFPDHFDSLGERYIVN 327 + +F +KA AQQL MFVS +LP+P LLK+ G WTALQILQ+ P +FD +GER+ ++ Sbjct: 564 ERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWIS 623 Query: 326 QGEILKFDFNRDMVESLFNEIISSVFVDNGSKEALNVFNSLQPLLMENLFLEGYSVCLKD 147 + ILK D+NRD+++SL NEI++S+F + G E L F+SLQPLLMENLF EG+SV L+D Sbjct: 624 KSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLED 683 Query: 146 FSVPKSFFEDLPMSIQDISSLLHRLRSRHNELVELQVRNHLPSVKAP 6 FS+P +++ +++DISSLL+ LRS +NEL++LQ NHL K P Sbjct: 684 FSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVP 730 >ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera] Length = 1830 Score = 622 bits (1604), Expect = e-176 Identities = 305/467 (65%), Positives = 371/467 (79%), Gaps = 1/467 (0%) Frame = -2 Query: 1403 EGYILQKLPVPPNCLSIPEXXXXXXXXXXXXXXXILRKVLKQAEIIKSSRSGHPNFESHK 1224 +GYILQ LPVPPNCLS+P+ +L+KVLKQ E+IK SRSG PNFESHK Sbjct: 204 DGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHK 263 Query: 1223 VEVNDLQSTVAEYFLARGTAKDSRDIKMS-GIRKEVGDYATKAWFEKMKTFFISKGSGYS 1047 +E N+LQS++ +Y RGTAK SR + G KE + +TKAW EKM+T FI KGSG+S Sbjct: 264 IEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEPNESSTKAWLEKMRTLFIRKGSGFS 323 Query: 1046 SRSVISGDAYKRVNEIGLPLEIAQRITFEEKVTERNKVHLQELVDKKLCLTYSDGASMYS 867 SRSVI+GDAYKRVNEIGLP EIAQRITFEE+V N HLQ LVD+KLCLTY DG S YS Sbjct: 324 SRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYS 383 Query: 866 LREGSKGHTILRVGQVVHRRIMDGDVVFINRPPSTHKHSLQALSVYVHEDHTVKINPLIC 687 LREGSKGHT LR GQVVHRRIMDGD+VFINRPP+THKHSLQALSVYVH+DHTVKINPLIC Sbjct: 384 LREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC 443 Query: 686 GPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLKIMF 507 GPL ADFDGDC+H+FYPQSL A+AEVLELFSVE+QLLSSH+G+LNLQLA D+LLSLK++F Sbjct: 444 GPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLF 503 Query: 506 KNFFFDKATAQQLAMFVSTNLPQPTLLKAFSVGSQWTALQILQSVFPDHFDSLGERYIVN 327 + +F +KA AQQL MFVS +LP+P LLK+ G WTALQILQ+ P +FD +GER+ ++ Sbjct: 504 ERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWIS 563 Query: 326 QGEILKFDFNRDMVESLFNEIISSVFVDNGSKEALNVFNSLQPLLMENLFLEGYSVCLKD 147 + ILK D+NRD+++SL NEI++S+F + G E L F+SLQPLLMENLF EG+SV L+D Sbjct: 564 KSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLED 623 Query: 146 FSVPKSFFEDLPMSIQDISSLLHRLRSRHNELVELQVRNHLPSVKAP 6 FS+P +++ +++DISSLL+ LRS +NEL++LQ NHL K P Sbjct: 624 FSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVP 670 >ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis sativus] Length = 1959 Score = 605 bits (1559), Expect = e-170 Identities = 304/467 (65%), Positives = 363/467 (77%), Gaps = 1/467 (0%) Frame = -2 Query: 1403 EGYILQKLPVPPNCLSIPEXXXXXXXXXXXXXXXILRKVLKQAEIIKSSRSGHPNFESHK 1224 +GYILQ LPVPPNCLS+PE +L+K+LKQ EIIK SRSG PNFESH+ Sbjct: 204 DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHE 263 Query: 1223 VEVNDLQSTVAEYFLARGTAKDSRDIKMS-GIRKEVGDYATKAWFEKMKTFFISKGSGYS 1047 VE NDLQ V +Y RGT K SR I G+ KE+ D +TKAW EKM+T FI KGSG+S Sbjct: 264 VEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFS 323 Query: 1046 SRSVISGDAYKRVNEIGLPLEIAQRITFEEKVTERNKVHLQELVDKKLCLTYSDGASMYS 867 SRSVI+GDAYK VNEIG+P E+AQRITFEE+V+ N +LQELVDKKLCLTY DG+S YS Sbjct: 324 SRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYS 383 Query: 866 LREGSKGHTILRVGQVVHRRIMDGDVVFINRPPSTHKHSLQALSVYVHEDHTVKINPLIC 687 LREGS GHT L+ GQ+VHRRIMDGD+VFINRPP+THKHSLQAL VY+H+DH VKINPLIC Sbjct: 384 LREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLIC 443 Query: 686 GPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLKIMF 507 GPL ADFDGDCIH+FYPQS+AA+AEVL LFSVE+QLLSSH+G+LNLQLAND+LLSLK+MF Sbjct: 444 GPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMF 503 Query: 506 KNFFFDKATAQQLAMFVSTNLPQPTLLKAFSVGSQWTALQILQSVFPDHFDSLGERYIVN 327 + +F KA AQQLAMFVS+ LP P LL S WTALQILQ+V P FD G+ Y++ Sbjct: 504 RKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIK 563 Query: 326 QGEILKFDFNRDMVESLFNEIISSVFVDNGSKEALNVFNSLQPLLMENLFLEGYSVCLKD 147 LKFDF+RD + SL NEI++S+F G +E L F+SLQPLLME++F EG+SV L D Sbjct: 564 NSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDD 623 Query: 146 FSVPKSFFEDLPMSIQDISSLLHRLRSRHNELVELQVRNHLPSVKAP 6 +S+P +F + L +IQ +S LL++LRS NELVELQ+ NHL SVK P Sbjct: 624 YSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVP 670 >ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit 1-like [Cucumis sativus] Length = 2019 Score = 605 bits (1559), Expect = e-170 Identities = 304/467 (65%), Positives = 363/467 (77%), Gaps = 1/467 (0%) Frame = -2 Query: 1403 EGYILQKLPVPPNCLSIPEXXXXXXXXXXXXXXXILRKVLKQAEIIKSSRSGHPNFESHK 1224 +GYILQ LPVPPNCLS+PE +L+K+LKQ EIIK SRSG PNFESH+ Sbjct: 234 DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHE 293 Query: 1223 VEVNDLQSTVAEYFLARGTAKDSRDIKMS-GIRKEVGDYATKAWFEKMKTFFISKGSGYS 1047 VE NDLQ V +Y RGT K SR I G+ KE+ D +TKAW EKM+T FI KGSG+S Sbjct: 294 VEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFS 353 Query: 1046 SRSVISGDAYKRVNEIGLPLEIAQRITFEEKVTERNKVHLQELVDKKLCLTYSDGASMYS 867 SRSVI+GDAYK VNEIG+P E+AQRITFEE+V+ N +LQELVDKKLCLTY DG+S YS Sbjct: 354 SRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYS 413 Query: 866 LREGSKGHTILRVGQVVHRRIMDGDVVFINRPPSTHKHSLQALSVYVHEDHTVKINPLIC 687 LREGS GHT L+ GQ+VHRRIMDGD+VFINRPP+THKHSLQAL VY+H+DH VKINPLIC Sbjct: 414 LREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLIC 473 Query: 686 GPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLKIMF 507 GPL ADFDGDCIH+FYPQS+AA+AEVL LFSVE+QLLSSH+G+LNLQLAND+LLSLK+MF Sbjct: 474 GPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMF 533 Query: 506 KNFFFDKATAQQLAMFVSTNLPQPTLLKAFSVGSQWTALQILQSVFPDHFDSLGERYIVN 327 + +F KA AQQLAMFVS+ LP P LL S WTALQILQ+V P FD G+ Y++ Sbjct: 534 RKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIK 593 Query: 326 QGEILKFDFNRDMVESLFNEIISSVFVDNGSKEALNVFNSLQPLLMENLFLEGYSVCLKD 147 LKFDF+RD + SL NEI++S+F G +E L F+SLQPLLME++F EG+SV L D Sbjct: 594 NSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDD 653 Query: 146 FSVPKSFFEDLPMSIQDISSLLHRLRSRHNELVELQVRNHLPSVKAP 6 +S+P +F + L +IQ +S LL++LRS NELVELQ+ NHL SVK P Sbjct: 654 YSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVP 700 >ref|XP_002299208.1| RNA polymerase IV subunit [Populus trichocarpa] gi|222846466|gb|EEE84013.1| RNA polymerase IV subunit [Populus trichocarpa] Length = 842 Score = 605 bits (1559), Expect = e-170 Identities = 303/467 (64%), Positives = 363/467 (77%), Gaps = 1/467 (0%) Frame = -2 Query: 1403 EGYILQKLPVPPNCLSIPEXXXXXXXXXXXXXXXILRKVLKQAEIIKSSRSGHPNFESHK 1224 +GYILQ+LPVPPNCLS+P IL+KVLKQ E+IKSSRSG PNF++HK Sbjct: 124 DGYILQQLPVPPNCLSVPAVSDGISIMSSDLSISILKKVLKQVEVIKSSRSGAPNFDAHK 183 Query: 1223 VEVNDLQSTVAEYFLARGTAKDSRDIKMS-GIRKEVGDYATKAWFEKMKTFFISKGSGYS 1047 E N LQS V Y RGT K SRD+ + G++K+ + +TKAW EKM+T FI KGSG+S Sbjct: 184 DEANSLQSMVDRYLQVRGTTKTSRDVDVRYGVKKDSSESSTKAWLEKMRTLFIRKGSGFS 243 Query: 1046 SRSVISGDAYKRVNEIGLPLEIAQRITFEEKVTERNKVHLQELVDKKLCLTYSDGASMYS 867 SRSVI+GDAY +VN++G+P EIAQRITFEE+V+ N +LQELVD KLCLTY DG+S YS Sbjct: 244 SRSVITGDAYTKVNQVGIPYEIAQRITFEERVSVHNMRYLQELVDNKLCLTYRDGSSTYS 303 Query: 866 LREGSKGHTILRVGQVVHRRIMDGDVVFINRPPSTHKHSLQALSVYVHEDHTVKINPLIC 687 LREGSKGHT LR GQVVHRRI+DGDVVFINRPP+THKHSLQALSVYVH+DHTVKINPLIC Sbjct: 304 LREGSKGHTFLRPGQVVHRRIIDGDVVFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC 363 Query: 686 GPLGADFDGDCIHIFYPQSLAARAEVLELFSVEQQLLSSHTGSLNLQLANDALLSLKIMF 507 GPL ADFDGDC+H+FYPQSLAA+AEVLELFSVE+QLLSSH+G+LNLQL D+LLSLK++F Sbjct: 364 GPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMIF 423 Query: 506 KNFFFDKATAQQLAMFVSTNLPQPTLLKAFSVGSQWTALQILQSVFPDHFDSLGERYIVN 327 K F DK+ AQQLAMFVS +LPQP LLK + WTA QILQ P F+ GER+++N Sbjct: 424 KACFLDKSAAQQLAMFVSPDLPQPALLKVNCIRPYWTAHQILQMALPTCFNCSGERFLIN 483 Query: 326 QGEILKFDFNRDMVESLFNEIISSVFVDNGSKEALNVFNSLQPLLMENLFLEGYSVCLKD 147 +LK DFNRD+V S+ NEI+ S+F + GS L FN+LQPLLMENLF EG+SV LKD Sbjct: 484 NSNVLKVDFNRDVVASMINEILISIFFEKGSGAVLKFFNALQPLLMENLFSEGFSVSLKD 543 Query: 146 FSVPKSFFEDLPMSIQDISSLLHRLRSRHNELVELQVRNHLPSVKAP 6 FS+ ++ + + S + IS LL LRS +NELVELQV NH+ VK P Sbjct: 544 FSISQAVKQSIQESFKVISPLLCNLRSTYNELVELQVENHIQDVKTP 590