BLASTX nr result

ID: Coptis21_contig00017532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017532
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310631.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002310056.1| predicted protein [Populus trichocarpa] gi|2...   171   6e-41
ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
emb|CBI35393.3| unnamed protein product [Vitis vinifera]              161   5e-38
ref|XP_002513121.1| conserved hypothetical protein [Ricinus comm...   161   5e-38

>ref|XP_002310631.1| predicted protein [Populus trichocarpa] gi|222853534|gb|EEE91081.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  172 bits (435), Expect = 3e-41
 Identities = 91/141 (64%), Positives = 99/141 (70%)
 Frame = -1

Query: 423 VWASGFSAAFLKKQSIATKXXXXXXXXXXXXXVHNQTIMESIPTVAESAXXXXXXXXXXX 244
           VWASGFSAAFLKK S+ATK             V ++T ME  P +AESA           
Sbjct: 51  VWASGFSAAFLKKHSVATKVHASSKESDMEVLVGSKTFMEPKPAIAESALLAVLEKFFDV 110

Query: 243 XLNLPKVNRRLSDVMDLLSVEQPKCPQLYIYSSADRVIPVESVESFIEKQRKAGHEVRAC 64
            LNLP VNRRLSDV+ LLS  QP CPQLYIYSSADRVIP  SVESFIEKQR+AGHEVRAC
Sbjct: 111 ILNLPMVNRRLSDVLSLLSSGQPSCPQLYIYSSADRVIPAGSVESFIEKQRRAGHEVRAC 170

Query: 63  NFVSTSHVDHYRNDPSRYTSQ 1
           NFV T HVDH+RNDP  YT+Q
Sbjct: 171 NFVFTPHVDHFRNDPKLYTTQ 191


>ref|XP_002310056.1| predicted protein [Populus trichocarpa] gi|222852959|gb|EEE90506.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  171 bits (433), Expect = 6e-41
 Identities = 90/141 (63%), Positives = 99/141 (70%)
 Frame = -1

Query: 423 VWASGFSAAFLKKQSIATKXXXXXXXXXXXXXVHNQTIMESIPTVAESAXXXXXXXXXXX 244
           VWASGFSAAFLKK S+ATK             V ++T ME  P +AESA           
Sbjct: 176 VWASGFSAAFLKKHSVATKVHASSKESDMEVLVGSKTFMEPKPAIAESALLAVLEKFFDV 235

Query: 243 XLNLPKVNRRLSDVMDLLSVEQPKCPQLYIYSSADRVIPVESVESFIEKQRKAGHEVRAC 64
            LN+P VNRRLSDV+ LLS  QP CPQLYIYSSADRVIP  SVESFIEKQR+AGHEVRAC
Sbjct: 236 ILNIPMVNRRLSDVLSLLSSGQPSCPQLYIYSSADRVIPAGSVESFIEKQRRAGHEVRAC 295

Query: 63  NFVSTSHVDHYRNDPSRYTSQ 1
           NFV T HVDH+RNDP  YT+Q
Sbjct: 296 NFVFTPHVDHFRNDPKLYTTQ 316


>ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|222855820|gb|EEE93367.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  163 bits (413), Expect = 1e-38
 Identities = 87/141 (61%), Positives = 97/141 (68%)
 Frame = -1

Query: 423 VWASGFSAAFLKKQSIATKXXXXXXXXXXXXXVHNQTIMESIPTVAESAXXXXXXXXXXX 244
           VWASGFSAAFLK  SIAT+             V ++T +E  P + ESA           
Sbjct: 287 VWASGFSAAFLKNHSIATRVHMSSKESDMEVLVGSKTHVEPKPAITESALLAILEKFFDV 346

Query: 243 XLNLPKVNRRLSDVMDLLSVEQPKCPQLYIYSSADRVIPVESVESFIEKQRKAGHEVRAC 64
            LNLP VNRRLSDV+ LLS  QP CPQLYIYSSADRVIP  SVESFIE+QR+AGHEVRAC
Sbjct: 347 ILNLPTVNRRLSDVLSLLSSGQPSCPQLYIYSSADRVIPAGSVESFIEEQRRAGHEVRAC 406

Query: 63  NFVSTSHVDHYRNDPSRYTSQ 1
           NFV T HVDH+RNDP  YT+Q
Sbjct: 407 NFVFTPHVDHFRNDPKLYTTQ 427


>emb|CBI35393.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  161 bits (408), Expect = 5e-38
 Identities = 84/141 (59%), Positives = 96/141 (68%)
 Frame = -1

Query: 423 VWASGFSAAFLKKQSIATKXXXXXXXXXXXXXVHNQTIMESIPTVAESAXXXXXXXXXXX 244
           VWASGFSAAFLK +S+ATK             V  + + E  P + E+A           
Sbjct: 219 VWASGFSAAFLKTRSVATKGTIRYDESGMEEFVDRKAVAEPKPAITEAALLVVLEKFFQV 278

Query: 243 XLNLPKVNRRLSDVMDLLSVEQPKCPQLYIYSSADRVIPVESVESFIEKQRKAGHEVRAC 64
            LNLP VNRRLSDV+  LS+ QP CPQLYIYSSADRVIP  SVE+FIE+QRKAG EVRAC
Sbjct: 279 VLNLPSVNRRLSDVLGQLSLGQPNCPQLYIYSSADRVIPAGSVETFIEEQRKAGREVRAC 338

Query: 63  NFVSTSHVDHYRNDPSRYTSQ 1
           NF+ST HVDH+RNDP  YTSQ
Sbjct: 339 NFISTPHVDHFRNDPKLYTSQ 359


>ref|XP_002513121.1| conserved hypothetical protein [Ricinus communis]
           gi|223548132|gb|EEF49624.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score =  161 bits (408), Expect = 5e-38
 Identities = 85/141 (60%), Positives = 95/141 (67%)
 Frame = -1

Query: 423 VWASGFSAAFLKKQSIATKXXXXXXXXXXXXXVHNQTIMESIPTVAESAXXXXXXXXXXX 244
           VWASGFSAAFLKK S+A+K             V  +T +E  P   E+A           
Sbjct: 284 VWASGFSAAFLKKNSVASKVHLNSRESSVEVSVGRKTFVEPKPAATEAALLVILEKFFGV 343

Query: 243 XLNLPKVNRRLSDVMDLLSVEQPKCPQLYIYSSADRVIPVESVESFIEKQRKAGHEVRAC 64
            LNLP VNRRLSDV+ LLS  QP CPQLYIYSSADRVIP  SVE+FIE+QRK GHEVRAC
Sbjct: 344 VLNLPTVNRRLSDVLSLLSSGQPTCPQLYIYSSADRVIPARSVETFIEEQRKVGHEVRAC 403

Query: 63  NFVSTSHVDHYRNDPSRYTSQ 1
           NFVST HVDH+RNDP  Y +Q
Sbjct: 404 NFVSTPHVDHFRNDPKLYGTQ 424


Top