BLASTX nr result

ID: Coptis21_contig00017531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017531
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524759.1| lipid binding protein, putative [Ricinus com...    77   5e-12
ref|NP_001235889.1| uncharacterized protein LOC100500289 precurs...    69   1e-09
ref|NP_001237161.1| uncharacterized protein LOC100306588 precurs...    69   1e-09
ref|XP_002300829.1| predicted protein [Populus trichocarpa] gi|2...    66   1e-08
gb|AFK46793.1| unknown [Lotus japonicus]                               65   1e-08

>ref|XP_002524759.1| lipid binding protein, putative [Ricinus communis]
           gi|223535943|gb|EEF37602.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 187

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 50/109 (45%), Positives = 55/109 (50%)
 Frame = -3

Query: 698 MALKMIEMTLTAMLVTMLICTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 519
           MALK +EM    +LV M+IC GAVAQ            PCLNY+TGN             
Sbjct: 1   MALKRVEMIAFLVLV-MMICHGAVAQSGCTSALMGLA-PCLNYVTGNSSTPSSSCCSQLA 58

Query: 518 XXXXXQPQCLCQAXXXXXXXXXXXXXNQTLALQLPSACKVQTPPISQCN 372
                QPQCLC A             NQTLAL LP AC VQTPP+SQCN
Sbjct: 59  TVVQSQPQCLC-AMLNGGGSSLGITINQTLALSLPGACNVQTPPVSQCN 106


>ref|NP_001235889.1| uncharacterized protein LOC100500289 precursor [Glycine max]
           gi|255629944|gb|ACU15324.1| unknown [Glycine max]
          Length = 170

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 46/111 (41%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
 Frame = -3

Query: 698 MALKMIEMTLTAMLVTMLICTGAVAQXXXXXXXXXXXS-PCLNYITGNXXXXXXXXXXXX 522
           MA   ++M L  +++ ML C GA AQ             PCLNYITGN            
Sbjct: 1   MAHTKVDMGLVLVVMAML-CAGAAAQSQSSCTNVLVSLSPCLNYITGNSSTPSSGCCSQL 59

Query: 521 XXXXXXQPQCLCQAXXXXXXXXXXXXXNQTLALQLPSACKVQTPPISQCNN 369
                 QPQCLCQ               QT AL LP ACKVQTPP SQCNN
Sbjct: 60  ASVVRSQPQCLCQVLSGGGSSLGININ-QTQALALPVACKVQTPPTSQCNN 109


>ref|NP_001237161.1| uncharacterized protein LOC100306588 precursor [Glycine max]
           gi|255628983|gb|ACU14836.1| unknown [Glycine max]
          Length = 168

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 45/105 (42%), Positives = 50/105 (47%)
 Frame = -3

Query: 683 IEMTLTAMLVTMLICTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXXXXXXX 504
           +EM L  +++ ML C GAVAQ            PCLNYITGN                  
Sbjct: 6   MEMGLVLVVMAML-CAGAVAQSSCTNVLVSLS-PCLNYITGNSSTPSSGCCSQLASVVRS 63

Query: 503 QPQCLCQAXXXXXXXXXXXXXNQTLALQLPSACKVQTPPISQCNN 369
           QPQCLCQ               QT AL LP AC+VQTPP SQCNN
Sbjct: 64  QPQCLCQVLSGGGSSLGLNIN-QTQALALPGACEVQTPPTSQCNN 107


>ref|XP_002300829.1| predicted protein [Populus trichocarpa] gi|222842555|gb|EEE80102.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 43/109 (39%), Positives = 53/109 (48%)
 Frame = -3

Query: 698 MALKMIEMTLTAMLVTMLICTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 519
           MA K ++++L  +L +M++C GA AQ            PCLNY+TGN             
Sbjct: 1   MASKGVQLSLMLVL-SMMLCHGATAQSGCTTALMGLV-PCLNYVTGNSSTPSSSCCSQLA 58

Query: 518 XXXXXQPQCLCQAXXXXXXXXXXXXXNQTLALQLPSACKVQTPPISQCN 372
                QPQCLC               NQTLAL LP AC V+TPP SQCN
Sbjct: 59  TIVQSQPQCLC-TLVNGGGSSFGIAINQTLALALPGACNVKTPPASQCN 106


>gb|AFK46793.1| unknown [Lotus japonicus]
          Length = 169

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 44/109 (40%), Positives = 49/109 (44%)
 Frame = -3

Query: 698 MALKMIEMTLTAMLVTMLICTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 519
           MA + + M L  +++ ML C G  AQ            PCLNYITGN             
Sbjct: 1   MAHRKMNMGLILVVMAML-CAGVAAQSSCANVLVSLS-PCLNYITGNSSTPSSGCCSQLA 58

Query: 518 XXXXXQPQCLCQAXXXXXXXXXXXXXNQTLALQLPSACKVQTPPISQCN 372
                QPQCLCQ               QT AL LP ACKVQTPP SQCN
Sbjct: 59  AVVRSQPQCLCQVLGGGASSLGININ-QTQALALPGACKVQTPPTSQCN 106


Top