BLASTX nr result

ID: Coptis21_contig00017510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017510
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB40036.1| putative protein [Arabidopsis thaliana] gi|72677...    64   1e-08
ref|XP_002276903.2| PREDICTED: transmembrane protein 120 homolog...    64   1e-08
dbj|BAH56951.1| AT4G10430 [Arabidopsis thaliana]                       64   1e-08
ref|XP_002518967.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
emb|CBI34643.3| unnamed protein product [Vitis vinifera]               64   1e-08

>emb|CAB40036.1| putative protein [Arabidopsis thaliana] gi|7267740|emb|CAB78166.1|
           putative protein [Arabidopsis thaliana]
          Length = 199

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
 Frame = -2

Query: 214 ASSFISKSTAEEQSLRQRALSINSNIQKLHSSVPQGQKLD-----EQLFRAKCILNDEDA 50
           A+SFIS S+ +E SLRQ+A +++S+I++LHS++   + LD     E L RA+C+L D + 
Sbjct: 21  AASFISSSSQQELSLRQKASAVDSSIRRLHSTIVSNKNLDPKLLEEDLHRARCMLVDGET 80

Query: 49  ASFLPNKSHGK 17
           +SFLP+K  G+
Sbjct: 81  SSFLPSKPQGR 91


>ref|XP_002276903.2| PREDICTED: transmembrane protein 120 homolog isoform 1 [Vitis
           vinifera]
          Length = 371

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 11/76 (14%)
 Frame = -2

Query: 214 ASSFISKSTAEEQSLRQRALSINSNIQKLHSSVPQ-----------GQKLDEQLFRAKCI 68
           ASS IS+++ EEQ+LR+ ALS++SNI +L S +               KLDE L RA+CI
Sbjct: 32  ASSHISRTSVEEQALRKSALSLDSNIHRLRSLIDSLHRNKILDPKLADKLDEDLQRARCI 91

Query: 67  LNDEDAASFLPNKSHG 20
           L D DA+SFLP  + G
Sbjct: 92  LVDGDASSFLPGNAQG 107


>dbj|BAH56951.1| AT4G10430 [Arabidopsis thaliana]
          Length = 326

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
 Frame = -2

Query: 214 ASSFISKSTAEEQSLRQRALSINSNIQKLHSSVPQG--------QKLDEQLFRAKCILND 59
           A+SFIS S+ +E SLRQ+A +++S+I++LHS++           +KL+E L RA+C+L D
Sbjct: 21  AASFISSSSQQELSLRQKASAVDSSIRRLHSTIVSNKNLDPKLVEKLEEDLHRARCMLVD 80

Query: 58  EDAASFLPNKSHGK 17
            + +SFLP+K  G+
Sbjct: 81  GETSSFLPSKPQGR 94


>ref|XP_002518967.1| conserved hypothetical protein [Ricinus communis]
           gi|223541954|gb|EEF43500.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 360

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 11/76 (14%)
 Frame = -2

Query: 214 ASSFISKSTAEEQSLRQRALSINSNIQKLHSSVPQ-----------GQKLDEQLFRAKCI 68
           A+S IS+ST +EQSLRQRALS+ S+I++  S                 KLDE L RA+C+
Sbjct: 31  AASLISRSTNDEQSLRQRALSLESSIRRCRSLFDSLLSRNLIHPKLADKLDEDLQRARCM 90

Query: 67  LNDEDAASFLPNKSHG 20
           + D DAA+FLP+K+ G
Sbjct: 91  MVDGDAAAFLPSKAQG 106


>emb|CBI34643.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 11/76 (14%)
 Frame = -2

Query: 214 ASSFISKSTAEEQSLRQRALSINSNIQKLHSSVPQ-----------GQKLDEQLFRAKCI 68
           ASS IS+++ EEQ+LR+ ALS++SNI +L S +               KLDE L RA+CI
Sbjct: 32  ASSHISRTSVEEQALRKSALSLDSNIHRLRSLIDSLHRNKILDPKLADKLDEDLQRARCI 91

Query: 67  LNDEDAASFLPNKSHG 20
           L D DA+SFLP  + G
Sbjct: 92  LVDGDASSFLPGNAQG 107


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