BLASTX nr result

ID: Coptis21_contig00017507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017507
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196294.1| late embryogenesis abundant protein 4-5 [Arabid...   115   7e-24
emb|CAA63008.1| LEA D113 homologue type1 [Arabidopsis thaliana]       115   9e-24
gb|ABY86896.1| LEA-like protein [Eutrema halophilum]                  115   9e-24
gb|AAT77224.1| group I late embryogenesis abundant protein [Bras...   113   4e-23
gb|AAT77223.1| group I late embryogenesis abundant protein [Bras...   113   4e-23

>ref|NP_196294.1| late embryogenesis abundant protein 4-5 [Arabidopsis thaliana]
           gi|9759304|dbj|BAB09810.1| late embryogenesis abundant
           protein LEA like [Arabidopsis thaliana]
           gi|15293005|gb|AAK93613.1| putative late embryogenesis
           abundant protein LEA [Arabidopsis thaliana]
           gi|20258877|gb|AAM14110.1| putative late embryogenesis
           abundant protein LEA [Arabidopsis thaliana]
           gi|332003679|gb|AED91062.1| late embryogenesis abundant
           protein 4-5 [Arabidopsis thaliana]
          Length = 158

 Score =  115 bits (288), Expect = 7e-24
 Identities = 67/139 (48%), Positives = 77/139 (55%), Gaps = 15/139 (10%)
 Frame = -1

Query: 601 MASAKETASNIAASAKSGMDKTKATVQEKVDKMSANDPIEKDMATQRKQDKITQAEMNKQ 422
           M S KETASNIAASAKSGMDKTKAT++EK +KM   DP++K MATQ K+DKI QAEM K+
Sbjct: 1   MQSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKINQAEMQKR 60

Query: 421 ETREHNA---------------TARQQVXXXXXXXXXXXXXXXXXXXXXXXXXGQVVEGT 287
           ETR+HNA               TA                              +VVEGT
Sbjct: 61  ETRQHNAAMKEAAGAGTGLGLGTATHSTTGQVGHGTGTHQMSALPGHGTGQLTDRVVEGT 120

Query: 286 VQSHPIGVNAGTGRTAAQN 230
             + PIG N GTGRT A N
Sbjct: 121 AVTDPIGRNTGTGRTTAHN 139


>emb|CAA63008.1| LEA D113 homologue type1 [Arabidopsis thaliana]
          Length = 158

 Score =  115 bits (287), Expect = 9e-24
 Identities = 66/139 (47%), Positives = 78/139 (56%), Gaps = 15/139 (10%)
 Frame = -1

Query: 601 MASAKETASNIAASAKSGMDKTKATVQEKVDKMSANDPIEKDMATQRKQDKITQAEMNKQ 422
           M S KETASNIAASAKSGMDKTKAT++EK +KM   DP++K MATQ K+DKI QAEM+K+
Sbjct: 1   MQSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKINQAEMHKR 60

Query: 421 ETREHNATARQQVXXXXXXXXXXXXXXXXXXXXXXXXXGQ---------------VVEGT 287
           ETR+HNA  ++                            Q               VVEGT
Sbjct: 61  ETRQHNAAMKEAAGAGTGLGLGTGTHSTTGQVGHGTGTHQMSALPGHGTGQLTDRVVEGT 120

Query: 286 VQSHPIGVNAGTGRTAAQN 230
             + PIG N GTGRT A N
Sbjct: 121 AVTDPIGRNTGTGRTTAHN 139


>gb|ABY86896.1| LEA-like protein [Eutrema halophilum]
          Length = 160

 Score =  115 bits (287), Expect = 9e-24
 Identities = 69/141 (48%), Positives = 76/141 (53%), Gaps = 17/141 (12%)
 Frame = -1

Query: 601 MASAKETASNIAASAKSGMDKTKATVQEKVDKMSANDPIEKDMATQRKQDKITQAEMNKQ 422
           M S KETASNIAASAKSGMDKTKAT++EK +KM   DP+EK MATQRK+ KI QAEM K+
Sbjct: 1   MQSMKETASNIAASAKSGMDKTKATLEEKAEKMKTQDPVEKQMATQRKEGKINQAEMQKR 60

Query: 421 ETREHNA-----------------TARQQVXXXXXXXXXXXXXXXXXXXXXXXXXGQVVE 293
           E  EHNA                 +A                             G VVE
Sbjct: 61  EVYEHNAAMKEAAGAGTGTGLGLGSATHATTGHLGHGTGTHQMSALPGHGTGQPTGHVVE 120

Query: 292 GTVQSHPIGVNAGTGRTAAQN 230
           GT  SHPIG N GTGRT A N
Sbjct: 121 GTAVSHPIGRNTGTGRTTAHN 141


>gb|AAT77224.1| group I late embryogenesis abundant protein [Brassica carinata]
          Length = 159

 Score =  113 bits (282), Expect = 4e-23
 Identities = 66/143 (46%), Positives = 78/143 (54%), Gaps = 17/143 (11%)
 Frame = -1

Query: 601 MASAKETASNIAASAKSGMDKTKATVQEKVDKMSANDPIEKDMATQRKQDKITQAEMNKQ 422
           M S  ETASNIAASAKSGMDKTKAT++EK +KM+  DPI+K+MATQ+K+ +I QAEM K+
Sbjct: 1   MQSMNETASNIAASAKSGMDKTKATLEEKAEKMTTRDPIQKEMATQKKEGRINQAEMQKR 60

Query: 421 ETREHNA-----------------TARQQVXXXXXXXXXXXXXXXXXXXXXXXXXGQVVE 293
           E REHNA                 TA                             G VV+
Sbjct: 61  EAREHNAAMKEASGAGTGTGLGLGTATHSTTGHVGHGTGTHQMSALPGHGTGEPTGHVVD 120

Query: 292 GTVQSHPIGVNAGTGRTAAQNPR 224
           GT  + PIG N GTGRT A N R
Sbjct: 121 GTAVTEPIGTNTGTGRTTAHNTR 143


>gb|AAT77223.1| group I late embryogenesis abundant protein [Brassica napus]
          Length = 159

 Score =  113 bits (282), Expect = 4e-23
 Identities = 65/143 (45%), Positives = 79/143 (55%), Gaps = 17/143 (11%)
 Frame = -1

Query: 601 MASAKETASNIAASAKSGMDKTKATVQEKVDKMSANDPIEKDMATQRKQDKITQAEMNKQ 422
           M S KETASNIAASAKSGMDKTKAT++EK +KM+  DP++K+MATQ+K+ +I +AEM K+
Sbjct: 1   MQSMKETASNIAASAKSGMDKTKATLEEKAEKMTTRDPLQKEMATQKKEGRINEAEMQKR 60

Query: 421 ETREHNA-----------------TARQQVXXXXXXXXXXXXXXXXXXXXXXXXXGQVVE 293
           E REHNA                 TA                             G VV+
Sbjct: 61  EVREHNAVMKEASGAGTGTGLGMGTATHSTTGHVGHGTGTHQMSALPGHGTGQPAGHVVD 120

Query: 292 GTVQSHPIGVNAGTGRTAAQNPR 224
           GT  + PIG N GTGRT A N R
Sbjct: 121 GTAVTEPIGTNTGTGRTTAHNTR 143


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