BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017505
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   303   2e-80
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              300   2e-79
ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|...   295   8e-78
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   291   1e-76
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   281   9e-74

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  303 bits (776), Expect = 2e-80
 Identities = 163/238 (68%), Positives = 184/238 (77%), Gaps = 1/238 (0%)
 Frame = +2

Query: 2    NTSVFAQNLPEMVVLAIHTGRIYSVLEVMNEKSAESSFDGEFDAGPSTYSSFREYFDKKY 181
            N SV   NL  MVVLAIHTGRIYS+L+V+ + SAES FDG  D   S Y++F EYF+ KY
Sbjct: 901  NNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYFNNKY 960

Query: 182  GIVLRYPGQPLLRLKQSHKAHNLLARPRNEVSKNEGG-MATEKTLAFVHMPAELLVSIDV 358
            GIVL YPGQPLL LKQSH AHNLL    +E +   G  M  EK    VHMP ELLVSI+V
Sbjct: 961  GIVLMYPGQPLLLLKQSHNAHNLLVNFNDEDALQTGQKMLNEKAQTHVHMPPELLVSIEV 1020

Query: 359  SIGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLNNCHISSSLILEALTSLRCCEDFSL 538
             I V+KS YLLPSL+HRLESLMLA QLREEI+    +  ISSSLILEA+T+LRC E FS+
Sbjct: 1021 PITVLKSSYLLPSLIHRLESLMLASQLREEIAFTTGS-QISSSLILEAITTLRCSESFSM 1079

Query: 539  ERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRSFAVCNSTLYKLGTNRKLQGYIR 712
            ERLELLGDSVLKY VSC L+LKYPKKHEGQLSA RS+ VCNSTL+KLGT+R LQGYIR
Sbjct: 1080 ERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIR 1137


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  300 bits (768), Expect = 2e-79
 Identities = 162/240 (67%), Positives = 183/240 (76%), Gaps = 3/240 (1%)
 Frame = +2

Query: 2    NTSVFAQNLPEMVVLAIHTGRIYSVLEVMNEKSAESSFDGEFDAGPSTYSSFREYFDKKY 181
            N SV   NL  MVVLAIHTGRIYS+L+V+ + SAES FDG  D   S Y++F EYF+ KY
Sbjct: 909  NNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYFNNKY 968

Query: 182  GIVLRYPGQPLLRLKQSHKAHNLLARPRNE---VSKNEGGMATEKTLAFVHMPAELLVSI 352
            GIVL YPGQPLL LKQSH AHNLL    +E     +    M  EK    VHMP ELLVSI
Sbjct: 969  GIVLMYPGQPLLLLKQSHNAHNLLVNFNDEGGEALQTGQKMLNEKAQTHVHMPPELLVSI 1028

Query: 353  DVSIGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLNNCHISSSLILEALTSLRCCEDF 532
            +V I V+KS YLLPSL+HRLESLMLA QLREEI+    +  ISSSLILEA+T+LRC E F
Sbjct: 1029 EVPITVLKSSYLLPSLIHRLESLMLASQLREEIAFTTGS-QISSSLILEAITTLRCSESF 1087

Query: 533  SLERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRSFAVCNSTLYKLGTNRKLQGYIR 712
            S+ERLELLGDSVLKY VSC L+LKYPKKHEGQLSA RS+ VCNSTL+KLGT+R LQGYIR
Sbjct: 1088 SMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIR 1147


>ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|222865638|gb|EEF02769.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1492

 Score =  295 bits (754), Expect = 8e-78
 Identities = 152/239 (63%), Positives = 185/239 (77%), Gaps = 3/239 (1%)
 Frame = +2

Query: 2    NTSVFAQNLPEMVVLAIHTGRIYSVLEVMNEKSAESSFDGEFDAGPSTYSSFREYFDKKY 181
            N  V  +N+ +MVVLAIHTGRIYS+++V+N+ SAES+F+G  D   + +S++ EYF+K+Y
Sbjct: 764  NALVNVENIKDMVVLAIHTGRIYSIVKVVNDSSAESAFEGNAD-NVTEFSTYTEYFNKRY 822

Query: 182  GIVLRYPGQPLLRLKQSHKAHNLLARPRNE---VSKNEGGMATEKTLAFVHMPAELLVSI 352
            GIVL +PGQPLLRLKQSH  HN L    +E   V  ++ GM   K    VHMP ELL+ I
Sbjct: 823  GIVLMHPGQPLLRLKQSHNPHNHLVNFNDEGLLVCDSKDGMVGRKQQQHVHMPPELLIKI 882

Query: 353  DVSIGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLNNCHISSSLILEALTSLRCCEDF 532
            DV I V+KS YL+PSLMHRLE LMLA QLR+EI C   N +I SSLILEA+T+LRCCE F
Sbjct: 883  DVPISVVKSIYLMPSLMHRLECLMLASQLRQEIDCHAPNFYIPSSLILEAITTLRCCESF 942

Query: 533  SLERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRSFAVCNSTLYKLGTNRKLQGYI 709
            S+ERLELLGDSVLKY VSC L+LKYP KHEGQLS+ RS AVCNSTL+KLGT+ K+QGYI
Sbjct: 943  SMERLELLGDSVLKYAVSCHLFLKYPNKHEGQLSSWRSGAVCNSTLHKLGTDCKVQGYI 1001


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  291 bits (744), Expect = 1e-76
 Identities = 151/240 (62%), Positives = 183/240 (76%), Gaps = 3/240 (1%)
 Frame = +2

Query: 2    NTSVFAQNLPEMVVLAIHTGRIYSVLEVMNEKSAESSFDGEFDAGPSTYSSFREYFDKKY 181
            N+SV A +L   VVLAIHTGRIY ++E +++K+AESSF    D   S +++F EYF KKY
Sbjct: 903  NSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAESSFAETVDTVSSEFANFYEYFYKKY 962

Query: 182  GIVLRYPGQPLLRLKQSHKAHNLLARPRNE---VSKNEGGMATEKTLAFVHMPAELLVSI 352
             IVL++PGQPL+ LKQSH  HNLL    +E      ++ G+  EK    VHMP ELL+ +
Sbjct: 963  NIVLKHPGQPLMLLKQSHNPHNLLVNFNDEGVSAKASQAGVVNEKPRFHVHMPPELLLVL 1022

Query: 353  DVSIGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLNNCHISSSLILEALTSLRCCEDF 532
            DV + V+KS YLLPSLMHRLESLMLA QLREEI+   +N  I SS+ILEALT+LRCCE F
Sbjct: 1023 DVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILEALTTLRCCESF 1082

Query: 533  SLERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRSFAVCNSTLYKLGTNRKLQGYIR 712
            S+ERLELLGDSVLKY VSC L+L+YP KHEGQLSA RS AVCNSTL+KLGT+ K+QGYIR
Sbjct: 1083 SMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIR 1142


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
            gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1660

 Score =  281 bits (719), Expect = 9e-74
 Identities = 150/237 (63%), Positives = 178/237 (75%)
 Frame = +2

Query: 2    NTSVFAQNLPEMVVLAIHTGRIYSVLEVMNEKSAESSFDGEFDAGPSTYSSFREYFDKKY 181
            N SV  + + +MVVLAIHTG+IYSV+EV+ + SAES F+      PS +S+F EYF+KKY
Sbjct: 909  NISVDVERVKDMVVLAIHTGKIYSVVEVVGDASAESPFEQNVGGAPSKFSTFSEYFNKKY 968

Query: 182  GIVLRYPGQPLLRLKQSHKAHNLLARPRNEVSKNEGGMATEKTLAFVHMPAELLVSIDVS 361
            GIVL  P QPLL LKQSHK HNLL  P  +  K+  G+   K   F  MP ELLVSIDV 
Sbjct: 969  GIVLLRPRQPLLLLKQSHKPHNLLNPPDEDTLKD--GLVVAKQRQFARMPPELLVSIDVP 1026

Query: 362  IGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLNNCHISSSLILEALTSLRCCEDFSLE 541
            I  +KS YLLPSLM+RLESLMLA QLR+EI+C ++N HI S LILEA+T+ R CE  S+E
Sbjct: 1027 IQTLKSSYLLPSLMYRLESLMLASQLRQEIACQVSNFHIPSLLILEAITTPRSCEKVSME 1086

Query: 542  RLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRSFAVCNSTLYKLGTNRKLQGYIR 712
            RLELLGDSVLKY VSC L+L+YP KHEGQLSA R+ AVCNSTL++LG   KLQGYIR
Sbjct: 1087 RLELLGDSVLKYSVSCDLFLRYPTKHEGQLSAQRTRAVCNSTLHQLGIGCKLQGYIR 1143