BLASTX nr result

ID: Coptis21_contig00016435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016435
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90301.1| nucleotide-binding site leucine-rich repeat prote...    85   5e-15
gb|AFC90704.1| nucleotide-binding site leucine-rich repeat prote...    85   7e-15
gb|AFC90844.1| nucleotide-binding site leucine-rich repeat prote...    84   9e-15
gb|AFC90843.1| nucleotide-binding site leucine-rich repeat prote...    84   9e-15
gb|AFC90842.1| nucleotide-binding site leucine-rich repeat prote...    84   9e-15

>gb|AFC90301.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron oldhamii]
          Length = 263

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   KTISNQLGQ---RFESVLWVTVSKDVNAQKLQNQIAKKVELDLSAEQDEAIXXXXXXXXX 173
           K I N+L +   +F+SVLWVTVSK  N  KLQ+ IAKK+   LS ++DE           
Sbjct: 6   KYIHNKLLEERDKFDSVLWVTVSKAFNVIKLQSDIAKKLNFSLSDDEDEKRRATHLHAAL 65

Query: 174 XXKGKFVLILDDMWVAFDLQALGVPEPTKYNGCKI 278
               K+VLI+DD+W  F L+ +G+PEPT+ NGCKI
Sbjct: 66  SRWKKYVLIIDDLWEEFSLERVGIPEPTQSNGCKI 100


>gb|AFC90704.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   KTISNQLGQ---RFESVLWVTVSKDVNAQKLQNQIAKKVELDLSAEQDEAIXXXXXXXXX 173
           K I N+L +   +F+SV WVTVSK+ N ++LQ +IAK+V++ +S ++D            
Sbjct: 6   KHIHNKLLEETDKFDSVFWVTVSKEFNVRELQREIAKEVKVCISDDEDATRRARELYAVL 65

Query: 174 XXKGKFVLILDDMWVAFDLQALGVPEPTKYNGCKI 278
             + ++VLILDD+W AF L+ +G+PEPT+ NGCK+
Sbjct: 66  SPRKRYVLILDDLWEAFPLEMVGIPEPTRSNGCKL 100


>gb|AFC90844.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   KTISNQLGQ---RFESVLWVTVSKDVNAQKLQNQIAKKVELDLSAEQDEAIXXXXXXXXX 173
           K I N+L +   +F+SV WVTVSK+ N ++LQ +IAK+V++ +S ++D            
Sbjct: 6   KYIHNKLLEETDKFDSVFWVTVSKEFNVRELQREIAKEVKVCISDDEDVTRRARELYAVL 65

Query: 174 XXKGKFVLILDDMWVAFDLQALGVPEPTKYNGCKI 278
             + ++VLILDD+W AF L+ +G+PEPT+ NGCK+
Sbjct: 66  SPRKRYVLILDDLWEAFPLEMVGIPEPTRSNGCKL 100


>gb|AFC90843.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   KTISNQLGQ---RFESVLWVTVSKDVNAQKLQNQIAKKVELDLSAEQDEAIXXXXXXXXX 173
           K I N+L +   +F+SV WVTVSK+ N ++LQ +IAK+V++ +S ++D            
Sbjct: 6   KHIHNKLLEETDKFDSVFWVTVSKEFNVRELQREIAKEVKVCISDDEDVTRRARELYAVL 65

Query: 174 XXKGKFVLILDDMWVAFDLQALGVPEPTKYNGCKI 278
             + ++VLILDD+W AF L+ +G+PEPT+ NGCK+
Sbjct: 66  SPRKRYVLILDDLWEAFPLEMVGIPEPTRSNGCKL 100


>gb|AFC90842.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 266

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   KTISNQLGQ---RFESVLWVTVSKDVNAQKLQNQIAKKVELDLSAEQDEAIXXXXXXXXX 173
           K I N+L +   +F+SV WVTVSK+ N ++LQ +IAK+V++ +S ++D            
Sbjct: 6   KHIHNKLLEETDKFDSVFWVTVSKEFNVRELQREIAKEVKVCISDDEDVTRRARELYAVL 65

Query: 174 XXKGKFVLILDDMWVAFDLQALGVPEPTKYNGCKI 278
             + ++VLILDD+W AF L+ +G+PEPT+ NGCK+
Sbjct: 66  SPRKRYVLILDDLWEAFPLEMVGIPEPTRSNGCKL 100


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