BLASTX nr result

ID: Coptis21_contig00016394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016394
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    72   5e-11
ref|XP_002297715.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_004162047.1| PREDICTED: uncharacterized protein LOC101224...    70   2e-10
emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]    69   4e-10
ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245...    68   7e-10

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
 Frame = -3

Query: 298 NFLRSFVHTDDGVALIL--HRLHWL-YNMESHMGPNIKILLDHGMPKCNISKLMTCNPRT 128
           +FL+  + TD  +A +L   R  W+ Y     M PNI+ L  HG+P+ NI +++   PRT
Sbjct: 136 SFLKKVLPTDHKIASLLTAKRGTWVVYKFSEQMVPNIETLRSHGVPESNILRMLILRPRT 195

Query: 127 LCLGPDKLSEIVLELKKMGFCPSSRMFVSGVRVLWGMKKSTW 2
           L    D+   I+  +K+MGF     MF+ G+  L GMKK+ W
Sbjct: 196 LSFNADEFKAILKRVKEMGFDEKGMMFIHGMCALCGMKKAKW 237


>ref|XP_002297715.1| predicted protein [Populus trichocarpa]
           gi|224053186|ref|XP_002297717.1| predicted protein
           [Populus trichocarpa] gi|222844973|gb|EEE82520.1|
           predicted protein [Populus trichocarpa]
           gi|222844975|gb|EEE82522.1| predicted protein [Populus
           trichocarpa]
          Length = 386

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
 Frame = -3

Query: 295 FLRSFVHTDDGVALILHRLHWLY--NMESHMGPNIKILLDHGMPKCNISKLMTCNPRTLC 122
           FL+SF+  ++ +   + R  W +  N  S + PN   L+  G+P   ++KL+   PRTL 
Sbjct: 155 FLKSFLDNNEKLLAAIKRYPWYFTFNFNSALKPNTVFLIKEGVPHDRVAKLILMYPRTLQ 214

Query: 121 LGPDKLSEIVLELKKMGFCPSSRMFVSGVRVLWGMKKSTW 2
           + PD++  +V  +K +G  P + +FV  +RV+ GM +STW
Sbjct: 215 MKPDRMVRVVNSVKNLGLEPKAPVFVHALRVMIGMSESTW 254


>ref|XP_004162047.1| PREDICTED: uncharacterized protein LOC101224556 [Cucumis sativus]
          Length = 374

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
 Frame = -3

Query: 292 LRSFVHTDDGVALILHRLHWL--YNMESHMGPNIKILLDHGMPKCNISKLMTCNPRTLCL 119
           L+  V +D+ V   + R  WL  +N +S + PN  +L+  G+P  N++KL+   PR +  
Sbjct: 144 LKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVLVSEGVPSRNLAKLIQVQPRVITQ 203

Query: 118 GPDKLSEIVLELKKMGFCPSSRMFVSGVRVLWGMKKSTW 2
             D+L ++V  +K++G  P +R+F+  +RV+  +  STW
Sbjct: 204 KVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTW 242


>emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]
          Length = 379

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
 Frame = -3

Query: 295 FLRSFVHTDDGVALILHRLHWL--YNMESHMGPNIKILLDHGMPKCNISKLMTCNPRTLC 122
           FL+S V  ++ V  +L + HW+   +++  + PNI IL + G+P  NI  L+TC+P  + 
Sbjct: 139 FLKSVVMVNENVVRVLRKTHWITVQSVQKAITPNIAILTEIGVPMSNILFLVTCHPNAVI 198

Query: 121 LGPDKLSEIVLELKKMGFCPSSRMFVSGVRVLWGMKKSTW 2
              +K S  V ++ +MGF P    F+  V+V+ GM +S W
Sbjct: 199 QNREKFSTSVKKVXEMGFDPLKVSFLKAVQVICGMGESIW 238


>ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245862 [Vitis vinifera]
          Length = 403

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
 Frame = -3

Query: 298 NFLRSFVHTDDGVALILHRLH--WLYNMESHMGPNIKILLDHGMPKCNISKLMTCNPRTL 125
           NF + F  +++    I+ R     L+++ +++  NI  L +  +PK NI+ L+   PR  
Sbjct: 156 NFFKDFFQSEEMAMGIVKRFARILLFDLHTYVESNINALQEFEVPKSNIAALLRHQPRVF 215

Query: 124 CLGPDKLSEIVLELKKMGFCPSSRMFVSGVRVLWGMKKSTW 2
            + P++  EI+ E+KKMGF PS   FV  V+ + GM KSTW
Sbjct: 216 MVRPNQFREILEEVKKMGFDPSQMKFVLAVQAIRGMSKSTW 256


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