BLASTX nr result

ID: Coptis21_contig00016345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016345
         (1809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate com...   577   e-162
ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160
ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi inter...   569   e-160
ref|XP_003615024.1| Endoplasmic reticulum-Golgi intermediate com...   568   e-159
ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi inter...   567   e-159

>ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate compartment protein,
            putative [Ricinus communis] gi|223546982|gb|EEF48479.1|
            Endoplasmic reticulum-Golgi intermediate compartment
            protein, putative [Ricinus communis]
          Length = 386

 Score =  577 bits (1486), Expect = e-162
 Identities = 270/382 (70%), Positives = 315/382 (82%), Gaps = 1/382 (0%)
 Frame = +2

Query: 329  ILNKLRNLDAYPKINEDFYNRTXXXXXXXXXXXXXXXXXXXXXXXXYLHTVTETTLNVDT 508
            I+NKLRNLDAYPKINEDFY+RT                        Y+H VTET L VDT
Sbjct: 4    IMNKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFISELRLYIHAVTETKLAVDT 63

Query: 509  SRGEKLRVNFDVTFPHLACSVLSIDAMDISGEQHYDIRHDITKKRMDNLGNVIDSRSDGI 688
            SRGE LR+NFDVTFP L CS+LS+DAMDISGEQH D++HDI KKR+D+ GNVI++R DGI
Sbjct: 64   SRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIEARQDGI 123

Query: 689  GGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPDMI 868
            G PKIE PLQ+HGGRL+HNETYCGSC+GAE +D++CCNSCE+VREAYRKKGWA++NPD+I
Sbjct: 124  GAPKIENPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWALSNPDLI 183

Query: 869  DQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQTEK 1048
            DQCKREGF+ R+K+E+GEGC+I GFLEVNKVAG+FHFAP K F QSN+H+ DL+A Q + 
Sbjct: 184  DQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQKDS 243

Query: 1049 SNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINSNQ 1228
             NISH+IN+L+FG  FPGVVNPLDGV WTQ+  SGMYQYFIKVVPT+YTD+    I SNQ
Sbjct: 244  FNISHKINRLAFGDYFPGVVNPLDGVHWTQETPSGMYQYFIKVVPTVYTDVSGYTIQSNQ 303

Query: 1229 FSVTEHFRSQEV-YTQFIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGGVFTVSG 1405
            FSVTEHFRS E    Q +PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGGVFTVSG
Sbjct: 304  FSVTEHFRSAEAGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSG 363

Query: 1406 IIDAFVYHGQRAIKKKMEIGKF 1471
            I+D+F+YHGQ+AIKKKMEIGKF
Sbjct: 364  ILDSFIYHGQKAIKKKMEIGKF 385


>ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|222856031|gb|EEE93578.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  571 bits (1472), Expect = e-160
 Identities = 265/382 (69%), Positives = 315/382 (82%), Gaps = 1/382 (0%)
 Frame = +2

Query: 329  ILNKLRNLDAYPKINEDFYNRTXXXXXXXXXXXXXXXXXXXXXXXXYLHTVTETTLNVDT 508
            +++KLRNLDAYPKINEDFY+RT                        YLH VTET L VDT
Sbjct: 4    LMSKLRNLDAYPKINEDFYSRTLSGGVITLASSVVMFLLFFSELRLYLHAVTETKLVVDT 63

Query: 509  SRGEKLRVNFDVTFPHLACSVLSIDAMDISGEQHYDIRHDITKKRMDNLGNVIDSRSDGI 688
            SRGE LR+NFDVTFP L CS+LS+DAMDISGEQH D++HDI KKR+D  GNVI++R DGI
Sbjct: 64   SRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDFHGNVIEARQDGI 123

Query: 689  GGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPDMI 868
            G PKIE+PLQ+HGGRL+HNETYCGSC+GAE +D++CCNSCE+VREAYRKKGWA+TNPD++
Sbjct: 124  GAPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWAVTNPDLM 183

Query: 869  DQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQTEK 1048
            DQCKREGF+ ++K+E+GEGC+I GFLEVNKVAG+FHFAP K F QS +H+ DL+A Q + 
Sbjct: 184  DQCKREGFLQKIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDS 243

Query: 1049 SNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINSNQ 1228
             NI+H+IN+L+FG+ FPGVVNPLDGVQWTQ+  SGMYQYFIKVVPT+YTD+    I SNQ
Sbjct: 244  FNITHKINRLTFGEYFPGVVNPLDGVQWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQ 303

Query: 1229 FSVTEHFRSQEV-YTQFIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGGVFTVSG 1405
            FSVTEHFR  ++   Q +PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGGVFTVSG
Sbjct: 304  FSVTEHFRGTDIGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSG 363

Query: 1406 IIDAFVYHGQRAIKKKMEIGKF 1471
            I+D F+YHGQ+AIKKKMEIGKF
Sbjct: 364  ILDTFIYHGQKAIKKKMEIGKF 385


>ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3 [Vitis vinifera] gi|302141938|emb|CBI19141.3|
            unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  569 bits (1467), Expect = e-160
 Identities = 269/382 (70%), Positives = 314/382 (82%), Gaps = 1/382 (0%)
 Frame = +2

Query: 329  ILNKLRNLDAYPKINEDFYNRTXXXXXXXXXXXXXXXXXXXXXXXXYLHTVTETTLNVDT 508
            I+NKLRNLDAYPKINEDFY+RT                        YLH VTET L VDT
Sbjct: 4    IINKLRNLDAYPKINEDFYSRTLSGGVITLASSIFMLLLFISELRLYLHAVTETKLVVDT 63

Query: 509  SRGEKLRVNFDVTFPHLACSVLSIDAMDISGEQHYDIRHDITKKRMDNLGNVIDSRSDGI 688
            SRGE LR+NFDVTFP L CS+LS+DAMDISGEQH D+RHDI KKR+D  G+VI++R DGI
Sbjct: 64   SRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVRHDIIKKRIDAHGSVIEARQDGI 123

Query: 689  GGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPDMI 868
            G PKIE+PLQKHGGRL+HNETYCGSC+GAE +DD+CCN+CEEVREAYRKKGWA++NPD+I
Sbjct: 124  GSPKIEKPLQKHGGRLEHNETYCGSCYGAEASDDDCCNNCEEVREAYRKKGWAMSNPDLI 183

Query: 869  DQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQTEK 1048
            DQCKREGF+ R+K+E+GEGC+I GFLEVNKVAG+FHFAP K F QSNIH+ DL+A Q + 
Sbjct: 184  DQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNIHVHDLLAFQKDS 243

Query: 1049 SNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINSNQ 1228
             NISH+IN+L+FG  FPGVVNPLDGVQW Q   SGMYQYFIKVVPT+YT +    I++NQ
Sbjct: 244  FNISHKINRLAFGDYFPGVVNPLDGVQWIQATPSGMYQYFIKVVPTVYTHVSGHTISTNQ 303

Query: 1229 FSVTEHFRSQEV-YTQFIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGGVFTVSG 1405
            FSVTEHFR+ E+   Q +PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGGVFTVSG
Sbjct: 304  FSVTEHFRNAELGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSG 363

Query: 1406 IIDAFVYHGQRAIKKKMEIGKF 1471
            I+D+F+YH Q+AIKKK+EIGKF
Sbjct: 364  ILDSFIYHSQKAIKKKIEIGKF 385


>ref|XP_003615024.1| Endoplasmic reticulum-Golgi intermediate compartment protein
            [Medicago truncatula] gi|355516359|gb|AES97982.1|
            Endoplasmic reticulum-Golgi intermediate compartment
            protein [Medicago truncatula]
          Length = 386

 Score =  568 bits (1464), Expect = e-159
 Identities = 265/382 (69%), Positives = 313/382 (81%), Gaps = 1/382 (0%)
 Frame = +2

Query: 329  ILNKLRNLDAYPKINEDFYNRTXXXXXXXXXXXXXXXXXXXXXXXXYLHTVTETTLNVDT 508
            I+NKLRNLDAYPKINEDFY+RT                        YLH  TET L VDT
Sbjct: 4    IMNKLRNLDAYPKINEDFYSRTLSGGLITIVSSILMLLLFFSELRLYLHAATETKLVVDT 63

Query: 509  SRGEKLRVNFDVTFPHLACSVLSIDAMDISGEQHYDIRHDITKKRMDNLGNVIDSRSDGI 688
            SRGE LR+NFDVTFP LACS++S+DAMDISGEQH D+RHDI KKR+D+ GNVI++R DGI
Sbjct: 64   SRGETLRINFDVTFPALACSIVSLDAMDISGEQHLDVRHDIIKKRIDSHGNVIETRQDGI 123

Query: 689  GGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPDMI 868
            G P IE+PLQ+HGGRL+HNETYCGSC+GAE +D+ECCNSCEEVREAYRKKGWA+++PD I
Sbjct: 124  GSPNIEKPLQRHGGRLEHNETYCGSCYGAEASDEECCNSCEEVREAYRKKGWALSSPDSI 183

Query: 869  DQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQTEK 1048
            DQCKREGF++R+KEE+GEGC++ GFLEVNKVAG+FHFAP K F QS +H+ DL+A Q E 
Sbjct: 184  DQCKREGFLERIKEEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKES 243

Query: 1049 SNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINSNQ 1228
             N+SH IN+++FG  FPGVVNPLD V WTQ+  SGMYQYFIKVVPT+YTD+    I SNQ
Sbjct: 244  FNLSHHINRIAFGDYFPGVVNPLDRVHWTQETPSGMYQYFIKVVPTMYTDVSGNTIQSNQ 303

Query: 1229 FSVTEHFRSQEV-YTQFIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGGVFTVSG 1405
            FSVTEHFR+ +V   Q +PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGG+FTVSG
Sbjct: 304  FSVTEHFRTADVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFTVSG 363

Query: 1406 IIDAFVYHGQRAIKKKMEIGKF 1471
            I+D+F+YHGQ+AIKKKME+GKF
Sbjct: 364  ILDSFIYHGQKAIKKKMELGKF 385


>ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3-like [Glycine max]
          Length = 386

 Score =  567 bits (1462), Expect = e-159
 Identities = 263/382 (68%), Positives = 314/382 (82%), Gaps = 1/382 (0%)
 Frame = +2

Query: 329  ILNKLRNLDAYPKINEDFYNRTXXXXXXXXXXXXXXXXXXXXXXXXYLHTVTETTLNVDT 508
            I++KLRNLDAYPKINEDFY+RT                        YLH VTET L VDT
Sbjct: 4    IMSKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFFSELRLYLHAVTETKLVVDT 63

Query: 509  SRGEKLRVNFDVTFPHLACSVLSIDAMDISGEQHYDIRHDITKKRMDNLGNVIDSRSDGI 688
            SR E LR+NFDVTFP L CS+LS+DAMDISGEQH D++HDI KKR+D+ GNVI++R +GI
Sbjct: 64   SRAETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIETRQEGI 123

Query: 689  GGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPDMI 868
            G PKIE+PLQ+HGGRL+HNETYCGSC+GAE +DD+CCNSCE+VREAYRKKGWA++NPD+I
Sbjct: 124  GAPKIEKPLQRHGGRLEHNETYCGSCYGAEESDDDCCNSCEDVREAYRKKGWALSNPDLI 183

Query: 869  DQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQTEK 1048
            DQCKREGF+ R+K+E+GEGC++ GFLEVNKVAG+FHFAP K F QS +H+ DL+A Q + 
Sbjct: 184  DQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDS 243

Query: 1049 SNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINSNQ 1228
             N+SH IN+L+FG+ FPGVVNPLD V WTQ+  SGMYQYFIKVVPT+YTD+    I SNQ
Sbjct: 244  FNLSHHINRLAFGEYFPGVVNPLDNVHWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQ 303

Query: 1229 FSVTEHFRSQEV-YTQFIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGGVFTVSG 1405
            FSVTEHFR+ +V   Q +PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGG+FTVSG
Sbjct: 304  FSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEENVSFLHFLTNVCAIVGGIFTVSG 363

Query: 1406 IIDAFVYHGQRAIKKKMEIGKF 1471
            I+D+F+YHGQRAIKKKME+GKF
Sbjct: 364  ILDSFIYHGQRAIKKKMELGKF 385


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