BLASTX nr result
ID: Coptis21_contig00016244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00016244
(770 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23934.3| unnamed protein product [Vitis vinifera] 94 3e-17
ref|XP_003491120.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquiti... 93 7e-17
gb|ABK94272.1| unknown [Populus trichocarpa] 93 7e-17
emb|CAN71997.1| hypothetical protein VITISV_004025 [Vitis vinifera] 93 7e-17
emb|CAA54603.1| pentameric polyubiquitin [Nicotiana tabacum] 93 7e-17
>emb|CBI23934.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 94.0 bits (232), Expect = 3e-17
Identities = 54/96 (56%), Positives = 63/96 (65%), Gaps = 8/96 (8%)
Frame = -1
Query: 407 PNGQDYDTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL- 231
P+ Q DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 38 PDQQSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 97
Query: 230 -------KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 98 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 133
Score = 88.2 bits (217), Expect = 2e-15
Identities = 44/54 (81%), Positives = 47/54 (87%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRLK 228
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL+
Sbjct: 120 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 173
>ref|XP_003491120.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Bombus
impatiens]
Length = 611
Score = 92.8 bits (229), Expect = 7e-17
Identities = 53/96 (55%), Positives = 63/96 (65%), Gaps = 8/96 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT +N KAKI DKEG+P DQQRLIFA KQLEDGRTL+ YNI K+STLHLVLRL
Sbjct: 401 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 460
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKDQLSRLP 126
KT T + E+ S T E + I +K+ + R P
Sbjct: 461 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPRSP 496
Score = 89.4 bits (220), Expect = 8e-16
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT +N KAKI DKEG+P DQQRLIFA KQLEDGRTL+ YNI K+STLHLVLRL
Sbjct: 21 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 80
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T E + I +K+
Sbjct: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKE 110
Score = 89.4 bits (220), Expect = 8e-16
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT +N KAKI DKEG+P DQQRLIFA KQLEDGRTL+ YNI K+STLHLVLRL
Sbjct: 97 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 156
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T E + I +K+
Sbjct: 157 VKTLTGKTITLEVEASDTIENVKAKIQDKE 186
Score = 89.4 bits (220), Expect = 8e-16
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT +N KAKI DKEG+P DQQRLIFA KQLEDGRTL+ YNI K+STLHLVLRL
Sbjct: 173 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 232
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T E + I +K+
Sbjct: 233 VKTLTGKTITLEVEASDTIENVKAKIQDKE 262
Score = 89.4 bits (220), Expect = 8e-16
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT +N KAKI DKEG+P DQQRLIFA KQLEDGRTL+ YNI K+STLHLVLRL
Sbjct: 249 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 308
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T E + I +K+
Sbjct: 309 VKTLTGKTITLEVEASDTIENVKAKIQDKE 338
Score = 89.4 bits (220), Expect = 8e-16
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT +N KAKI DKEG+P DQQRLIFA KQLEDGRTL+ YNI K+STLHLVLRL
Sbjct: 325 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 384
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T E + I +K+
Sbjct: 385 VKTLTGKTITLEVEASDTIENVKAKIQDKE 414
Score = 87.0 bits (214), Expect = 4e-15
Identities = 52/92 (56%), Positives = 61/92 (66%), Gaps = 10/92 (10%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPR--DQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL----- 231
DT +N KAKI DKEG+PR DQQRLIFA KQLEDGRTL+ YNI K+STLHLVLRL
Sbjct: 477 DTIENVKAKIQDKEGIPRSPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 536
Query: 230 ---KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T E + I +K+
Sbjct: 537 IFVKTLTGKTITLEVEASDTIENVKAKIQDKE 568
Score = 85.5 bits (210), Expect = 1e-14
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRLK 228
DT +N KAKI DKEG+P DQQRLIFA KQLEDGRTL+ YNI K+STLHLVLRL+
Sbjct: 555 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 608
>gb|ABK94272.1| unknown [Populus trichocarpa]
Length = 154
Score = 92.8 bits (229), Expect = 7e-17
Identities = 53/90 (58%), Positives = 62/90 (68%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRLKTST--- 219
DT DN KAKILDKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL+ T
Sbjct: 21 DTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIK 80
Query: 218 -STCSSDEIRI----SATEEEFRRAIIEKD 144
T + EI I + T + + + EK+
Sbjct: 81 VKTLTGKEIEIDIEPNDTIDRIKERVEEKE 110
Score = 57.8 bits (138), Expect = 3e-06
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRLK 228
DT D K ++ +KEG+P QQRLI+A KQL D +T YNI S LHLVL L+
Sbjct: 97 DTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTARDYNIEGGSVLHLVLALR 150
>emb|CAN71997.1| hypothetical protein VITISV_004025 [Vitis vinifera]
Length = 538
Score = 92.8 bits (229), Expect = 7e-17
Identities = 53/90 (58%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DTTDN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 97 DTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 156
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 186
Score = 92.4 bits (228), Expect = 9e-17
Identities = 53/90 (58%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI KDSTLHLVLRL
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHLVLRLRGGMQIF 80
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 81 VKTLTRKTITLEVESSDTTDNVKAKIQDKE 110
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 173 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 232
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 249 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 308
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 309 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 325 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 384
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 385 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 401 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 460
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 461 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 490
Score = 89.4 bits (220), Expect = 8e-16
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRLKTSTSTC 210
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTL YNI K+STLHL+LRL+ C
Sbjct: 477 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLILRLRGGDGGC 536
Query: 209 S 207
S
Sbjct: 537 S 537
>emb|CAA54603.1| pentameric polyubiquitin [Nicotiana tabacum]
Length = 346
Score = 92.8 bits (229), Expect = 7e-17
Identities = 53/95 (55%), Positives = 63/95 (66%), Gaps = 8/95 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 249 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 308
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKDQLSRL 129
KT T + E+ S T + + I +K+ + R+
Sbjct: 309 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPRI 343
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 80
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 110
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 97 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 156
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 186
Score = 90.5 bits (223), Expect = 4e-16
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 389 DTTDNFKAKILDKEGVPRDQQRLIFAWKQLEDGRTLAGYNIFKDSTLHLVLRL------- 231
DT DN KAKI DKEG+P DQQRLIFA KQLEDGRTLA YNI K+STLHLVLRL
Sbjct: 173 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 232
Query: 230 -KTSTSTCSSDEIRISATEEEFRRAIIEKD 144
KT T + E+ S T + + I +K+
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 262