BLASTX nr result

ID: Coptis21_contig00016180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016180
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280751.1| PREDICTED: uncharacterized protein LOC100266...   263   7e-68
ref|XP_002280761.1| PREDICTED: uncharacterized protein LOC100266...   257   4e-66
ref|XP_002518899.1| conserved hypothetical protein [Ricinus comm...   219   1e-54
ref|XP_003610894.1| hypothetical protein MTR_5g008220 [Medicago ...   217   4e-54
ref|XP_002303688.1| predicted protein [Populus trichocarpa] gi|2...   214   5e-53

>ref|XP_002280751.1| PREDICTED: uncharacterized protein LOC100266795 isoform 1 [Vitis
            vinifera] gi|147827011|emb|CAN62288.1| hypothetical
            protein VITISV_034705 [Vitis vinifera]
            gi|297742428|emb|CBI34577.3| unnamed protein product
            [Vitis vinifera]
          Length = 252

 Score =  263 bits (672), Expect = 7e-68
 Identities = 137/238 (57%), Positives = 170/238 (71%), Gaps = 2/238 (0%)
 Frame = -1

Query: 1197 TLAQMSILTTPSPFTLKLPFLQHPH--SKYQLLIQKRNQRKKKRGCFKCRAELMQDAPFA 1024
            +L   S  + P   +LK   L+ P   S +  L +  +QR+ ++G   CRAEL QDAPFA
Sbjct: 4    SLLLSSAFSCPPFLSLKPHLLRPPGFASSFPNLRKSFHQRRIRKGA--CRAELSQDAPFA 61

Query: 1023 IAIGTCVLNSLVFPLPKXXXXXXXXXXXXXDARFAVMGIISFIPYFNWLSWIFAWLDTGS 844
            IAIG C+LNSLVFP+               DARFAVMGIISFIPYFNWLSW+FAW+DTG 
Sbjct: 62   IAIGACMLNSLVFPITSGADDDGDTVIDSTDARFAVMGIISFIPYFNWLSWVFAWMDTGK 121

Query: 843  KRYVVYSIVYLAPYLRTNLSLSPEESWLPIASIFFCIIHIQLEASIRNGDLQGFQIFNEA 664
            +RY++YSIVYLAPYLR+NLSL PE+SWLPIASI FCIIHIQLEASIRNGD+QGFQ+F+  
Sbjct: 122  RRYIIYSIVYLAPYLRSNLSLLPEDSWLPIASIVFCIIHIQLEASIRNGDIQGFQLFSGV 181

Query: 663  LKYGSPLAKKNNADLKIDEGISKKGRKQERQELPSANEQSRNELHGWGVPEKPDKQTE 490
             K+ S +  K N  LK  +G +K+G+++E   LPSA EQSRNE+  WGVP KP ++ E
Sbjct: 182  EKHLSSITGKKNT-LKDHQGTTKEGKRKEHTGLPSAEEQSRNEIRQWGVPRKPSQEPE 238


>ref|XP_002280761.1| PREDICTED: uncharacterized protein LOC100266795 isoform 2 [Vitis
            vinifera]
          Length = 260

 Score =  257 bits (657), Expect = 4e-66
 Identities = 138/246 (56%), Positives = 170/246 (69%), Gaps = 10/246 (4%)
 Frame = -1

Query: 1197 TLAQMSILTTPSPFTLKLPFLQHPH--SKYQLLIQKRNQRKKKRGCFKCRAELMQDAPFA 1024
            +L   S  + P   +LK   L+ P   S +  L +  +QR+ ++G   CRAEL QDAPFA
Sbjct: 4    SLLLSSAFSCPPFLSLKPHLLRPPGFASSFPNLRKSFHQRRIRKGA--CRAELSQDAPFA 61

Query: 1023 IAIGTCVLNSLVFPLPKXXXXXXXXXXXXXDARFAVMGIISFIPYFNWLSWIFAWLDTGS 844
            IAIG C+LNSLVFP+               DARFAVMGIISFIPYFNWLSW+FAW+DTG 
Sbjct: 62   IAIGACMLNSLVFPITSGADDDGDTVIDSTDARFAVMGIISFIPYFNWLSWVFAWMDTGK 121

Query: 843  KRYVVYSIVYLAPYLRTNLSLSPEESWLPIASIFFCIIHIQLEASIRNGDLQGFQIFNEA 664
            +RY++YSIVYLAPYLR+NLSL PE+SWLPIASI FCIIHIQLEASIRNGD+QGFQ+F+  
Sbjct: 122  RRYIIYSIVYLAPYLRSNLSLLPEDSWLPIASIVFCIIHIQLEASIRNGDIQGFQLFSGV 181

Query: 663  LKYGSPLAKKNNADLKIDEGISK--------KGRKQERQELPSANEQSRNELHGWGVPEK 508
             K+ S +  K N  LK  +G +K        KG+++E   LPSA EQSRNE+  WGVP K
Sbjct: 182  EKHLSSITGKKNT-LKDHQGTTKEHSQLFYVKGKRKEHTGLPSAEEQSRNEIRQWGVPRK 240

Query: 507  PDKQTE 490
            P ++ E
Sbjct: 241  PSQEPE 246


>ref|XP_002518899.1| conserved hypothetical protein [Ricinus communis]
            gi|223541886|gb|EEF43432.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 248

 Score =  219 bits (557), Expect = 1e-54
 Identities = 124/238 (52%), Positives = 155/238 (65%)
 Frame = -1

Query: 1197 TLAQMSILTTPSPFTLKLPFLQHPHSKYQLLIQKRNQRKKKRGCFKCRAELMQDAPFAIA 1018
            T    SIL   S     LP L H H++  +LI+K++ + K      CRAE  +DAPFA A
Sbjct: 10   TTTSSSILKPLSHLPRSLPKLNH-HTR--VLIKKKSLKNKGI----CRAEFSRDAPFAAA 62

Query: 1017 IGTCVLNSLVFPLPKXXXXXXXXXXXXXDARFAVMGIISFIPYFNWLSWIFAWLDTGSKR 838
            IG C+L+SL+ P                DAR   MGIISF+PYFNWLSW+FAWLDTG +R
Sbjct: 63   IGACMLSSLLLPNAVNTDDDGDSAIDSTDARLTAMGIISFVPYFNWLSWVFAWLDTGKRR 122

Query: 837  YVVYSIVYLAPYLRTNLSLSPEESWLPIASIFFCIIHIQLEASIRNGDLQGFQIFNEALK 658
            Y VY++VYLAPYLR+N+SLSPEESWLP+ASI   IIH+QLEASI+NGD+QGFQ FNEA  
Sbjct: 123  YAVYALVYLAPYLRSNMSLSPEESWLPVASIVLGIIHVQLEASIKNGDIQGFQFFNEAAN 182

Query: 657  YGSPLAKKNNADLKIDEGISKKGRKQERQELPSANEQSRNELHGWGVPEKPDKQTEES 484
            +   L KK   +LK  + + ++GR QE + LPSA E+ RNE+   GV  K  K  E S
Sbjct: 183  F---LTKKKEINLKDHQELYEEGR-QEHENLPSA-EELRNEIPKSGVHRKSSKHPENS 235


>ref|XP_003610894.1| hypothetical protein MTR_5g008220 [Medicago truncatula]
            gi|355512229|gb|AES93852.1| hypothetical protein
            MTR_5g008220 [Medicago truncatula]
          Length = 255

 Score =  217 bits (553), Expect = 4e-54
 Identities = 116/231 (50%), Positives = 150/231 (64%), Gaps = 3/231 (1%)
 Frame = -1

Query: 1158 FTLKLPFLQHPHSKYQLLIQ---KRNQRKKKRGCFKCRAELMQDAPFAIAIGTCVLNSLV 988
            F  K PFL +P   + + I+   K N+   ++    C+A  + DAPFA AIG C+L SL+
Sbjct: 19   FKFKKPFLINPSPSFGIQIKPSFKFNKDHYRQSY--CKAVFVDDAPFAAAIGACMLTSLI 76

Query: 987  FPLPKXXXXXXXXXXXXXDARFAVMGIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLA 808
             P+P              D R AVMGI+SFIPYFNWLSW+FAWLDTG++RY VYS+VYLA
Sbjct: 77   LPVPVATEEEEESSLTSTDTRLAVMGIMSFIPYFNWLSWVFAWLDTGNRRYAVYSLVYLA 136

Query: 807  PYLRTNLSLSPEESWLPIASIFFCIIHIQLEASIRNGDLQGFQIFNEALKYGSPLAKKNN 628
            PYLR+NLS+SPE+SWLPIASI FCI+HIQLEASIRNGD+QGFQ+F   +   S  +KK  
Sbjct: 137  PYLRSNLSISPEDSWLPIASILFCIVHIQLEASIRNGDVQGFQLFRNVMDQQSSSSKKKG 196

Query: 627  ADLKIDEGISKKGRKQERQELPSANEQSRNELHGWGVPEKPDKQTEESGDT 475
               +  E    KG K E++ L SA E SR ++ GW   ++P +  +   DT
Sbjct: 197  RLNRHQE--MSKGSKNEKKNLLSAEEPSR-DIGGWEDSQRPVEYQQRLHDT 244


>ref|XP_002303688.1| predicted protein [Populus trichocarpa] gi|222841120|gb|EEE78667.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score =  214 bits (544), Expect = 5e-53
 Identities = 120/249 (48%), Positives = 155/249 (62%), Gaps = 6/249 (2%)
 Frame = -1

Query: 1209 TLVNTLAQMSILTTP---SPFTLKLPFLQHPHSKYQLLIQKRNQRKKKRGCFKCRAELMQ 1039
            TL  T +    L  P   SP     P   H H K  +      ++K  RG   CRA L  
Sbjct: 3    TLATTASLSPSLKPPNLTSPLIKLEPSFFHHHCKTLI-----KRKKFNRGI--CRAALSD 55

Query: 1038 DAPFAIAIGTCVLNSLVFP--LPKXXXXXXXXXXXXXDARFAVMGIISFIPYFNWLSWIF 865
            D PFA+AI  C+L+SL+ P    K             D R AVMGIISFIPYFNWLSW+F
Sbjct: 56   DTPFAVAISVCMLSSLLLPNTATKDEEEESDSGITTTDTRIAVMGIISFIPYFNWLSWVF 115

Query: 864  AWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESWLPIASIFFCIIHIQLEASIRNGDLQG 685
            AWLDTG +RY +YS+VYLAPYLR+N+SLSPE+SWLPIASI F I+H+QLEASI+NGD+QG
Sbjct: 116  AWLDTGKRRYAIYSLVYLAPYLRSNMSLSPEDSWLPIASIIFGIVHVQLEASIKNGDVQG 175

Query: 684  FQIFNEALKYGSPLAKKNNADLKIDEGISKKGRKQERQELPSANEQSRNELHGWGVPEK- 508
            FQ+F++A K+     KK +  L+  +   ++ R+ E   LP+A++QSRNEL   GVP   
Sbjct: 176  FQLFSKAAKFLPLPGKKKDIILREHQEPLEEEREGEHMNLPTADKQSRNELRQRGVPRNH 235

Query: 507  PDKQTEESG 481
            P+ +   +G
Sbjct: 236  PENRAHSNG 244


Top