BLASTX nr result

ID: Coptis21_contig00016127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016127
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531882.1| hypothetical protein RCOM_1439870 [Ricinus c...   152   4e-68
ref|XP_002263866.1| PREDICTED: alkylated DNA repair protein alkB...   142   5e-65
ref|XP_002320350.1| predicted protein [Populus trichocarpa] gi|2...   147   3e-64
ref|XP_004152257.1| PREDICTED: alkylated DNA repair protein alkB...   140   4e-62
ref|NP_001068395.1| Os11g0657200 [Oryza sativa Japonica Group] g...   138   8e-56

>ref|XP_002531882.1| hypothetical protein RCOM_1439870 [Ricinus communis]
           gi|223528490|gb|EEF30519.1| hypothetical protein
           RCOM_1439870 [Ricinus communis]
          Length = 258

 Score =  152 bits (383), Expect(2) = 4e-68
 Identities = 71/104 (68%), Positives = 86/104 (82%)
 Frame = +1

Query: 364 QGICAHVDLMRFEDGIAIVSLESSCVMHFTRVETEASSIEIGEKKESVLKTPILLTPGSL 543
           +GICAHVDLMRFEDGIAIVSLESSCVMHFT+V    ++ E GEK + +   P+ LTPGSL
Sbjct: 154 EGICAHVDLMRFEDGIAIVSLESSCVMHFTQVRAVDAN-EKGEKDQDMTSIPVYLTPGSL 212

Query: 544 ILMFGEARYLWKHEINRNAGFQMWGGQEIHQQKRISVTLRRLCP 675
           +L++G+ARYLWKHEINR  GFQMW GQE+ Q++R S+TLR LCP
Sbjct: 213 VLLWGDARYLWKHEINRKPGFQMWEGQELSQKRRTSITLRMLCP 256



 Score =  134 bits (337), Expect(2) = 4e-68
 Identities = 67/121 (55%), Positives = 81/121 (66%)
 Frame = +3

Query: 6   SDSDESTNNKWEEVKEIKGLWLCRDXXXXXXXXXXXXXIQNEGWFTEASQNQAMRFGDLP 185
           S S    N  WE + +I GLWLCR+             IQNEGWFTE+S NQAMRFGDLP
Sbjct: 34  SHSTTDQNPTWEPIHQINGLWLCRNFLSSHQQSTLLSHIQNEGWFTESSNNQAMRFGDLP 93

Query: 186 AWATELSHSIREAVIYAGNVSFSGDLETFDLNEEEVCPMPSNLVFREPLFDQLIVNVYQP 365
           +WA +LSHSIRE V++   +S S +L + D  E     +PSNL++REPLFDQLIVNVYQP
Sbjct: 94  SWAIQLSHSIREVVLFGDQISQSPNLGSCD-EENGSTLLPSNLLWREPLFDQLIVNVYQP 152

Query: 366 G 368
           G
Sbjct: 153 G 153


>ref|XP_002263866.1| PREDICTED: alkylated DNA repair protein alkB homolog 8 [Vitis
           vinifera] gi|297743861|emb|CBI36831.3| unnamed protein
           product [Vitis vinifera]
          Length = 260

 Score =  142 bits (358), Expect(2) = 5e-65
 Identities = 70/105 (66%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
 Frame = +1

Query: 364 QGICAHVDLMRFEDGIAIVSLESSCVMHFTRVE-TEA-SSIEIGEKKESVLKTPILLTPG 537
           +GIC HVDLMRFEDGIAI+SLESSC+MHFT V+ TEA  S   G     + K P+ LTPG
Sbjct: 153 EGICPHVDLMRFEDGIAIISLESSCIMHFTHVDDTEACDSGREGRNYSPMTKIPVYLTPG 212

Query: 538 SLILMFGEARYLWKHEINRNAGFQMWGGQEIHQQKRISVTLRRLC 672
           SL+LM GEARY WKHEINR  GFQ+W GQEI Q+ R S+TLR+LC
Sbjct: 213 SLVLMSGEARYFWKHEINRKPGFQIWEGQEIDQKSRTSITLRKLC 257



 Score =  133 bits (335), Expect(2) = 5e-65
 Identities = 65/114 (57%), Positives = 79/114 (69%)
 Frame = +3

Query: 27  NNKWEEVKEIKGLWLCRDXXXXXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPAWATELS 206
           N  WE + EI GLWLCRD             I+ EGWF+EAS NQAMRFG+LP WATELS
Sbjct: 40  NPSWEPISEINGLWLCRDFLSPQEQSSLLSAIEKEGWFSEASHNQAMRFGNLPEWATELS 99

Query: 207 HSIREAVIYAGNVSFSGDLETFDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPG 368
           HSIRE V+++  VS   D  T D  +E+ C +PS +++REPLFDQLI+NVYQPG
Sbjct: 100 HSIREVVLFSDYVSEHMDSVTCD-GDEKGCLLPSEILWREPLFDQLILNVYQPG 152


>ref|XP_002320350.1| predicted protein [Populus trichocarpa] gi|222861123|gb|EEE98665.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  147 bits (372), Expect(2) = 3e-64
 Identities = 69/103 (66%), Positives = 85/103 (82%)
 Frame = +1

Query: 364 QGICAHVDLMRFEDGIAIVSLESSCVMHFTRVETEASSIEIGEKKESVLKTPILLTPGSL 543
           +GICAHVDLMRFEDGIAIVSLESSCVMHFT+V  E S  +  +    ++K P+ L PGSL
Sbjct: 152 EGICAHVDLMRFEDGIAIVSLESSCVMHFTQVG-EVSDCDKEQPDLPMIKIPVFLMPGSL 210

Query: 544 ILMFGEARYLWKHEINRNAGFQMWGGQEIHQQKRISVTLRRLC 672
           +L+FG+ARYLWKHEINR  GFQMW GQE++Q++R S+TLR+LC
Sbjct: 211 VLLFGDARYLWKHEINRKPGFQMWEGQEVNQKRRTSITLRKLC 253



 Score =  125 bits (314), Expect(2) = 3e-64
 Identities = 63/111 (56%), Positives = 71/111 (63%)
 Frame = +3

Query: 36  WEEVKEIKGLWLCRDXXXXXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPAWATELSHSI 215
           WE +KEIKGLWLCR              IQNEGWF EAS NQAMRFGDLP+WA ELS+SI
Sbjct: 42  WEPIKEIKGLWLCRHFLSPHQQSTFLSAIQNEGWFLEASNNQAMRFGDLPSWAIELSNSI 101

Query: 216 REAVIYAGNVSFSGDLETFDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPG 368
           RE V+Y   +         D   E  C +P +L+ REP FDQLIVNVYQPG
Sbjct: 102 REVVLYGDRIHEPPSCAGSD-RGEAACWLPPDLLSREPFFDQLIVNVYQPG 151


>ref|XP_004152257.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Cucumis sativus] gi|449484295|ref|XP_004156842.1|
           PREDICTED: alkylated DNA repair protein alkB homolog
           8-like [Cucumis sativus]
          Length = 260

 Score =  140 bits (352), Expect(2) = 4e-62
 Identities = 66/104 (63%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
 Frame = +1

Query: 364 QGICAHVDLMRFEDGIAIVSLESSCVMHFTRVETEASSIEI-GEKKESVLKTPILLTPGS 540
           +GICAHVDLMRFEDGIAIVSLES C+MHFT+V+  +    I GE   S  K P+ L PGS
Sbjct: 154 EGICAHVDLMRFEDGIAIVSLESPCIMHFTQVDKTSCDPSIKGEVNLSTSKVPVYLNPGS 213

Query: 541 LILMFGEARYLWKHEINRNAGFQMWGGQEIHQQKRISVTLRRLC 672
           L++++GEARY WKHEINR  GFQ+W GQE+ Q +R S+TLR+LC
Sbjct: 214 LVILWGEARYHWKHEINRKPGFQIWEGQELAQGRRTSITLRKLC 257



 Score =  126 bits (316), Expect(2) = 4e-62
 Identities = 59/113 (52%), Positives = 83/113 (73%)
 Frame = +3

Query: 30  NKWEEVKEIKGLWLCRDXXXXXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPAWATELSH 209
           +KWE+VK+IKGLWLCR              I+NEGWF EASQNQAMRFG+LP WA ELS 
Sbjct: 42  HKWEQVKQIKGLWLCRFFLSPQQQSSLLSAIRNEGWFMEASQNQAMRFGNLPTWAVELSD 101

Query: 210 SIREAVIYAGNVSFSGDLETFDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPG 368
           S+ EAV+ + +++ +  ++ ++  ++  CP+PS++++REPLFDQ+I NVYQPG
Sbjct: 102 SVYEAVLSSNHMTDTLIVDRYN-GDKIDCPLPSDILWREPLFDQMIANVYQPG 153


>ref|NP_001068395.1| Os11g0657200 [Oryza sativa Japonica Group]
           gi|77552371|gb|ABA95168.1| oxidoreductase, 2OG-Fe
           oxygenase family protein, putative, expressed [Oryza
           sativa Japonica Group] gi|113645617|dbj|BAF28758.1|
           Os11g0657200 [Oryza sativa Japonica Group]
           gi|125535173|gb|EAY81721.1| hypothetical protein
           OsI_36895 [Oryza sativa Indica Group]
           gi|125577943|gb|EAZ19165.1| hypothetical protein
           OsJ_34702 [Oryza sativa Japonica Group]
           gi|215765543|dbj|BAG87240.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 259

 Score =  138 bits (347), Expect(2) = 8e-56
 Identities = 70/108 (64%), Positives = 81/108 (75%), Gaps = 4/108 (3%)
 Frame = +1

Query: 364 QGICAHVDLMRFEDGIAIVSLESSCVMHFTRVETEASSIEIGEKKESV----LKTPILLT 531
           +GICAHVDLMRF+DGIAIVSLES CVMHF+R E E   + I E  ESV     K P+ L 
Sbjct: 152 EGICAHVDLMRFDDGIAIVSLESPCVMHFSRAEQE---VPICETLESVHAEPTKIPVYLN 208

Query: 532 PGSLILMFGEARYLWKHEINRNAGFQMWGGQEIHQQKRISVTLRRLCP 675
           PGSL+LM G+ARYLWKHEINR  G Q WGG+E+ QQ R S+TLR+L P
Sbjct: 209 PGSLVLMSGDARYLWKHEINRKPGAQQWGGRELEQQIRTSITLRKLLP 256



 Score =  107 bits (266), Expect(2) = 8e-56
 Identities = 53/112 (47%), Positives = 75/112 (66%)
 Frame = +3

Query: 33  KWEEVKEIKGLWLCRDXXXXXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPAWATELSHS 212
           +WE V+ ++GLWLC               I+ EGWF++A +NQAMRFGDLP+WA ELS  
Sbjct: 43  RWEAVEGVRGLWLCAAFLSADEQSRLLTAIRREGWFSDA-RNQAMRFGDLPSWAVELSAL 101

Query: 213 IREAVIYAGNVSFSGDLETFDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPG 368
           I EA+ + G+V     LE  +  +E+ CP+PS+L++R+PLFDQ+I N Y+PG
Sbjct: 102 IHEAICF-GDVRVGCGLELKN-EDEDACPLPSDLLWRKPLFDQMIANRYEPG 151


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