BLASTX nr result

ID: Coptis21_contig00016100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016100
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [...   567   e-159
ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [...   566   e-159
ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|2...   565   e-159
ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [...   562   e-158
ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin...   561   e-158

>ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 474

 Score =  567 bits (1462), Expect = e-159
 Identities = 262/315 (83%), Positives = 297/315 (94%)
 Frame = -3

Query: 1166 LSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFIHGDGLNDVIITGENGTIDGQ 987
            L+ GAVIKATQ+  NWPL+APLPSYGRGRELPGGRYMSFIHGDGL+DV+ITGENGTIDGQ
Sbjct: 132  LAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGENGTIDGQ 191

Query: 986  GDVWWNMWKQRTLQFTRPHLVEFMNSRNIIISNVIFQNSPFWNIHPVYCSNVVIRHVTIL 807
            GDVWWNMW+QRTLQFTRP+LVEF+NS++IIISNVIF+NSPFWNIHPVYCSNVV+R+VTIL
Sbjct: 192  GDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTIL 251

Query: 806  APADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWDEYGIQYGRKSHGITIRRVTG 627
            AP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWDEYGI YGR S+GITIRR+TG
Sbjct: 252  APRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRLTG 311

Query: 626  SSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNIGRGGFIKNITISDVYMENAR 447
            SSPFAGIAIGSETSGGVE+VLAE+INLFNMG+GIH+KTN GRGG IKNIT++ VY+ENAR
Sbjct: 312  SSPFAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENAR 371

Query: 446  KGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQAGSIQGLKNSPFTGICLSNI 267
            +GIKIAGDVG HPD+KF+PNALPVV G+TI+NVWGV+V QAG I GL+NSPFT +CLSNI
Sbjct: 372  QGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGLRNSPFTDVCLSNI 431

Query: 266  NLHGVTGPGTPTWKC 222
            N HG+ GP +P+WKC
Sbjct: 432  NFHGMRGPRSPSWKC 446


>ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 442

 Score =  566 bits (1459), Expect = e-159
 Identities = 262/315 (83%), Positives = 296/315 (93%)
 Frame = -3

Query: 1166 LSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFIHGDGLNDVIITGENGTIDGQ 987
            L+ GAVIKATQ+  NWPL+ PLPSYGRGRELPGGRYMSFIHGDGL+DV+ITGENGTIDGQ
Sbjct: 100  LAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGENGTIDGQ 159

Query: 986  GDVWWNMWKQRTLQFTRPHLVEFMNSRNIIISNVIFQNSPFWNIHPVYCSNVVIRHVTIL 807
            GDVWWNMW+QRTLQFTRP+LVEF+NS++IIISNVIF+NSPFWNIHPVYCSNVV+R+VTIL
Sbjct: 160  GDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTIL 219

Query: 806  APADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWDEYGIQYGRKSHGITIRRVTG 627
            AP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWDEYGI YGR S+GITIRRVTG
Sbjct: 220  APRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRVTG 279

Query: 626  SSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNIGRGGFIKNITISDVYMENAR 447
            SSPFAGIAIGSETSGGVE+VLAE+INLFNMG+GIH+KTN GRGG IKNIT++ VY+ENAR
Sbjct: 280  SSPFAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENAR 339

Query: 446  KGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQAGSIQGLKNSPFTGICLSNI 267
            +GIKIAGDVG HPD+KF+PNALPVV G+TI+NVWGVKV QAG I GL+NSPFT +CLS+I
Sbjct: 340  QGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQAGLIHGLRNSPFTDVCLSDI 399

Query: 266  NLHGVTGPGTPTWKC 222
            N HG+ GP +P+WKC
Sbjct: 400  NFHGMEGPRSPSWKC 414


>ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|222841984|gb|EEE79531.1|
            predicted protein [Populus trichocarpa]
          Length = 412

 Score =  565 bits (1457), Expect = e-159
 Identities = 268/346 (77%), Positives = 301/346 (86%)
 Frame = -3

Query: 1166 LSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFIHGDGLNDVIITGENGTIDGQ 987
            L++GAVIKATQD+ NWPL+APLPSYGRGRE  GGRYMSFIHGDGL DVIITGENGTIDGQ
Sbjct: 67   LARGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGENGTIDGQ 126

Query: 986  GDVWWNMWKQRTLQFTRPHLVEFMNSRNIIISNVIFQNSPFWNIHPVYCSNVVIRHVTIL 807
            GDVWWNMW+QRTL FTRP+LVEF+NSR IIISNVIF+NSPFWNIHPVY  NVVIR+VTIL
Sbjct: 127  GDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVIRYVTIL 186

Query: 806  APADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWDEYGIQYGRKSHGITIRRVTG 627
            AP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWDEYGI YGR S  ITIRR+TG
Sbjct: 187  APLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITG 246

Query: 626  SSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNIGRGGFIKNITISDVYMENAR 447
            SSPF+GIA+GSETSGGV++VL EN+NL+NMG+GIH+KTNIGRGGFIKNIT++DVYMEN R
Sbjct: 247  SSPFSGIAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYMENVR 306

Query: 446  KGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQAGSIQGLKNSPFTGICLSNI 267
            KGIKIAGDVGDHPDD F+PNALPVV G+T++++WG KVQQ GSIQGLKNSPFTGICLSNI
Sbjct: 307  KGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGICLSNI 366

Query: 266  NLHGVTGPGTPTWKCXXXXXXXXXXXXXXXSQLTTISGNTTCYNSF 129
            NLHGV GP +  WKC               S+LT+     +C + F
Sbjct: 367  NLHGVPGPRSSPWKCSDVSGSALLVSPWPCSELTSPHQTGSCSDHF 412


>ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 446

 Score =  562 bits (1449), Expect = e-158
 Identities = 264/315 (83%), Positives = 291/315 (92%)
 Frame = -3

Query: 1166 LSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFIHGDGLNDVIITGENGTIDGQ 987
            L+ GAVI ATQDS NWPL+APLPSYGRGRE PGGRYMSFIHGDG+ DV+ITGENGTIDGQ
Sbjct: 102  LAAGAVIMATQDSLNWPLIAPLPSYGRGRERPGGRYMSFIHGDGVQDVVITGENGTIDGQ 161

Query: 986  GDVWWNMWKQRTLQFTRPHLVEFMNSRNIIISNVIFQNSPFWNIHPVYCSNVVIRHVTIL 807
            GD WWN W+Q TLQFTRP+LVEF+NSR+IIISNVIF+NSPFWNIHPVYCSNVV+R+VTIL
Sbjct: 162  GDAWWNKWRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTIL 221

Query: 806  APADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWDEYGIQYGRKSHGITIRRVTG 627
            AP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWDEYGI YGR S  ITIRR+TG
Sbjct: 222  APRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITG 281

Query: 626  SSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNIGRGGFIKNITISDVYMENAR 447
            SSPFAGIAIGSETSGGVE+VLAE+INL+NMG+GIH+KTN GRGGFIKNIT+S VYME AR
Sbjct: 282  SSPFAGIAIGSETSGGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMSHVYMEEAR 341

Query: 446  KGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQAGSIQGLKNSPFTGICLSNI 267
            KGI+I+GDVGDHPDDKFD NALP+V GVTI+NVWG+KV QAG IQGL+NSPFT ICL +I
Sbjct: 342  KGIRISGDVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDI 401

Query: 266  NLHGVTGPGTPTWKC 222
            NLHGVTGP TP WKC
Sbjct: 402  NLHGVTGPRTPPWKC 416


>ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
            gi|223549848|gb|EEF51336.1| Polygalacturonase precursor,
            putative [Ricinus communis]
          Length = 446

 Score =  561 bits (1447), Expect = e-158
 Identities = 264/315 (83%), Positives = 290/315 (92%)
 Frame = -3

Query: 1166 LSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFIHGDGLNDVIITGENGTIDGQ 987
            L++GAVIKATQD+ NWPL+APLPSYGRGRE  GGRYMSFIHGDGL+DV+ITGENGTIDGQ
Sbjct: 101  LARGAVIKATQDTWNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLHDVVITGENGTIDGQ 160

Query: 986  GDVWWNMWKQRTLQFTRPHLVEFMNSRNIIISNVIFQNSPFWNIHPVYCSNVVIRHVTIL 807
            GD+WWNMW+QRTLQFTRP+LVEF+NSR IIISNVIFQNSPFWNIHPVYCSNVVIR VTIL
Sbjct: 161  GDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIHPVYCSNVVIRFVTIL 220

Query: 806  APADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWDEYGIQYGRKSHGITIRRVTG 627
            AP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWDEYGI YGR S  ITIRR+TG
Sbjct: 221  APHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRRITG 280

Query: 626  SSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNIGRGGFIKNITISDVYMENAR 447
            SSPFAGIA+GSETSGGVE VLAENINL++MG+G+HVKTNIGRGGFI+NIT SDVYM+NAR
Sbjct: 281  SSPFAGIAVGSETSGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYMKNAR 340

Query: 446  KGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQAGSIQGLKNSPFTGICLSNI 267
            KGIKIAGDVGDHPDD ++PNALPVV G+  R VWG  V Q G+IQGLK+SPFTGICLSNI
Sbjct: 341  KGIKIAGDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGICLSNI 400

Query: 266  NLHGVTGPGTPTWKC 222
            NLHGV GP +  WKC
Sbjct: 401  NLHGVPGPRSTPWKC 415


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