BLASTX nr result

ID: Coptis21_contig00016080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016080
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278133.1| PREDICTED: uncharacterized protein LOC100244...    79   4e-13
ref|XP_003555487.1| PREDICTED: uncharacterized protein LOC100805...    76   2e-12
ref|XP_003535470.1| PREDICTED: uncharacterized protein LOC100813...    76   3e-12
ref|XP_002299411.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_003591648.1| hypothetical protein MTR_1g090200 [Medicago ...    74   2e-11

>ref|XP_002278133.1| PREDICTED: uncharacterized protein LOC100244287 [Vitis vinifera]
           gi|297744976|emb|CBI38568.3| unnamed protein product
           [Vitis vinifera]
          Length = 148

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +3

Query: 204 TTTDELLPVYDPLSEFAKKEKLRMKFAENAVHVIPLVLVVCGLILWVLSNP 356
           + ++E LPVYDP+SE AKKE+ R+KFAENAVHVIP VL++C +ILWV SNP
Sbjct: 31  SVSNEELPVYDPVSEMAKKERSRIKFAENAVHVIPFVLLLCAIILWVFSNP 81


>ref|XP_003555487.1| PREDICTED: uncharacterized protein LOC100805238 [Glycine max]
          Length = 142

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +3

Query: 222 LPVYDPLSEFAKKEKLRMKFAENAVHVIPLVLVVCGLILWVLSNP 356
           LP YDP++E AK+E+ R+KFAENAVHVIPLVL+VC +ILW+ SNP
Sbjct: 39  LPTYDPIAELAKRERARVKFAENAVHVIPLVLIVCAIILWLFSNP 83


>ref|XP_003535470.1| PREDICTED: uncharacterized protein LOC100813926 [Glycine max]
          Length = 142

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 31/45 (68%), Positives = 40/45 (88%)
 Frame = +3

Query: 222 LPVYDPLSEFAKKEKLRMKFAENAVHVIPLVLVVCGLILWVLSNP 356
           LP YDP++E AK+E+ R+KFAENAVHVIPLVL++C +ILW+ SNP
Sbjct: 39  LPTYDPIAELAKRERARVKFAENAVHVIPLVLIICAIILWLFSNP 83


>ref|XP_002299411.1| predicted protein [Populus trichocarpa] gi|222846669|gb|EEE84216.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
 Frame = +3

Query: 93  MHRSSSTTRASE--FFLHGXXXXXXXXXXXXXXXXXXLDTTTDEL--LPVYDPLSEFAKK 260
           MHRS+S  R ++  +F H                     +++ EL  LP YDP+ E A K
Sbjct: 1   MHRSASWNRVADDDYFKHRMADQYYMHSSPNEGTQGMRMSSSIELNQLPAYDPMVELAMK 60

Query: 261 EKLRMKFAENAVHVIPLVLVVCGLILWVLSNP 356
           EK R KFAENAVH+IP VL++CGL+LW  SNP
Sbjct: 61  EKSRAKFAENAVHIIPFVLLLCGLVLWFFSNP 92


>ref|XP_003591648.1| hypothetical protein MTR_1g090200 [Medicago truncatula]
           gi|355480696|gb|AES61899.1| hypothetical protein
           MTR_1g090200 [Medicago truncatula]
          Length = 142

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = +3

Query: 222 LPVYDPLSEFAKKEKLRMKFAENAVHVIPLVLVVCGLILWVLSNP 356
           LP YDP+ E AKKEK R+KF+ENAVHVIP VL++C +ILW+ SNP
Sbjct: 38  LPTYDPIVELAKKEKARVKFSENAVHVIPFVLLLCAIILWIFSNP 82


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