BLASTX nr result

ID: Coptis21_contig00016074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016074
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-58
ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263...   227   1e-57
ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|2...   225   4e-57
emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]   222   3e-56
ref|XP_002530400.1| conserved hypothetical protein [Ricinus comm...   216   3e-54

>ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|222864226|gb|EEF01357.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  230 bits (587), Expect = 1e-58
 Identities = 119/192 (61%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
 Frame = +1

Query: 13  MRKLCPNFDREDGLETVLEVPIPEEMFTSSATKSFKSWQNMKSWMKSHIERSVPSSNTNL 192
           MRKLCPNFDREDGL+TVLEVPIPEEMF S+   + +SWQNMK+WM+ H ERS+    T  
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFASNKHGN-RSWQNMKAWMRPHNERSM----TTR 55

Query: 193 FGGRSSEXXXXXXXXXXXXXXXXXCSDHS-INRNIKDHPIESSMAKYIVQQYIAAAGGDK 369
           FGG+++E                   DH  INRNIKDHPIESSMAKYIVQQYIAA GG++
Sbjct: 56  FGGKNTEIQFLLGVVGAPLIPLPILCDHQFINRNIKDHPIESSMAKYIVQQYIAAVGGER 115

Query: 370 ALNGIGSLYAMGKVKMVTSDFSSGDGIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRP 549
           ALN + S+YAMGKVKMV S+F +G+G   + NN K +KVK+ + HG GE+G FVLW+KRP
Sbjct: 116 ALNSVDSMYAMGKVKMVASEFCAGEG---SLNNNKTLKVKN-QKHGGGEMGGFVLWKKRP 171

Query: 550 DLWCLELVLSGC 585
           DLWCLELV+SGC
Sbjct: 172 DLWCLELVVSGC 183


>ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263234 [Vitis vinifera]
           gi|296086114|emb|CBI31555.3| unnamed protein product
           [Vitis vinifera]
          Length = 426

 Score =  227 bits (579), Expect = 1e-57
 Identities = 121/192 (63%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
 Frame = +1

Query: 13  MRKLCPNFDREDGLETVLEVPIPEEMFTSSATKSFKSWQNMKSWMKSHIERSVPSSNTNL 192
           MRKLCPNFDREDGL+TVLEVPIPEEMF S  + S  SWQN+KSWMKS+ ERS     T++
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFPSHKSTSL-SWQNVKSWMKSNPERSA----TSI 55

Query: 193 FGGRSSEXXXXXXXXXXXXXXXXX-CSDHSINRNIKDHPIESSMAKYIVQQYIAAAGGDK 369
           FGGR++E                  C  H IN++IKDHPIE+SMAKYIVQQYIAAAGG+ 
Sbjct: 56  FGGRNTEIQLLLGVVGAPLIPLPVRCDRHPINQSIKDHPIEASMAKYIVQQYIAAAGGET 115

Query: 370 ALNGIGSLYAMGKVKMVTSDFSSGDGIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRP 549
           ALN I S+YAMGKV+MVTS+FS+G+  K      K +KVK +R HG GE+G FVLWQKRP
Sbjct: 116 ALNSIDSMYAMGKVRMVTSEFSAGEVCK-----NKAMKVKGVR-HGGGEMGGFVLWQKRP 169

Query: 550 DLWCLELVLSGC 585
           +LWCLELV+SGC
Sbjct: 170 ELWCLELVVSGC 181


>ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|222851953|gb|EEE89500.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  225 bits (574), Expect = 4e-57
 Identities = 118/192 (61%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
 Frame = +1

Query: 13  MRKLCPNFDREDGLETVLEVPIPEEMFTSSATKSFKSWQNMKSWMKSHIERSVPSSNTNL 192
           MRKLCPNFDREDGLETVLEVPIPEEMF S+   S +SWQNMK+WM+ H ERS+    T L
Sbjct: 1   MRKLCPNFDREDGLETVLEVPIPEEMFASNK-HSNRSWQNMKAWMRPHSERSM----TTL 55

Query: 193 FGGRSSEXXXXXXXXXXXXXXXXXCSDHS-INRNIKDHPIESSMAKYIVQQYIAAAGGDK 369
           FGG+++E                   DH  IN NIKD PIE+SMAKYIVQQYIAA GG++
Sbjct: 56  FGGKNTEIQLLLGVVGAPLIPLQIRCDHQLINCNIKDQPIEASMAKYIVQQYIAAVGGER 115

Query: 370 ALNGIGSLYAMGKVKMVTSDFSSGDGIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRP 549
           ALN + S+YAMGKVKM  S+F +G+G   + N+ K ++VK+ +NHG GE+G FVLWQKRP
Sbjct: 116 ALNSVDSMYAMGKVKMEASEFCAGEG---SLNSNKVLRVKN-QNHGGGEMGGFVLWQKRP 171

Query: 550 DLWCLELVLSGC 585
           DLWCLELV+SGC
Sbjct: 172 DLWCLELVVSGC 183


>emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]
          Length = 426

 Score =  222 bits (566), Expect = 3e-56
 Identities = 120/192 (62%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
 Frame = +1

Query: 13  MRKLCPNFDREDGLETVLEVPIPEEMFTSSATKSFKSWQNMKSWMKSHIERSVPSSNTNL 192
           MRKLCPNFDREDGL+TVLEVPIPEEMF S  + S  SWQN+KSWMKS+ ERS     T++
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFPSHKSTSL-SWQNVKSWMKSNPERSA----TSI 55

Query: 193 FGGRSSEXXXXXXXXXXXXXXXXX-CSDHSINRNIKDHPIESSMAKYIVQQYIAAAGGDK 369
           FGGR+ E                  C  H IN++IKDHPIE+SMAKYIVQQYIAAAGG+ 
Sbjct: 56  FGGRNXEIQLLLGVVGAPLIPLXVRCDRHPINQSIKDHPIEASMAKYIVQQYIAAAGGET 115

Query: 370 ALNGIGSLYAMGKVKMVTSDFSSGDGIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRP 549
           ALN I S+YAMGKV M+ S+FS+G+  K      K +KVK +R HG GE+G FVLWQKRP
Sbjct: 116 ALNSIDSMYAMGKVTMMASEFSAGEVCK-----NKAMKVKGVR-HGGGEMGGFVLWQKRP 169

Query: 550 DLWCLELVLSGC 585
           +LWCLELV+SGC
Sbjct: 170 ELWCLELVVSGC 181


>ref|XP_002530400.1| conserved hypothetical protein [Ricinus communis]
           gi|223530049|gb|EEF31970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score =  216 bits (549), Expect = 3e-54
 Identities = 112/192 (58%), Positives = 139/192 (72%), Gaps = 1/192 (0%)
 Frame = +1

Query: 13  MRKLCPNFDREDGLETVLEVPIPEEMFTSSATKSFKSWQNMKSWMKSHIERSVPSSNTNL 192
           MRKLCPNFDREDGL+TVLEVPIPEEMF S+   + +SWQNMK+W++   ++S+     NL
Sbjct: 1   MRKLCPNFDREDGLDTVLEVPIPEEMFGSNKNGN-RSWQNMKAWIRPQTDKSI----ANL 55

Query: 193 FGGRSSEXXXXXXXXXXXXXXXXXCSDHS-INRNIKDHPIESSMAKYIVQQYIAAAGGDK 369
           FGG+++E                   DH  INRN+KD PIE+SMAKYIVQQYIAA GG+ 
Sbjct: 56  FGGKNTEIQLLLGVVGAPLIPLPIRCDHQFINRNMKDEPIEASMAKYIVQQYIAAVGGEG 115

Query: 370 ALNGIGSLYAMGKVKMVTSDFSSGDGIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRP 549
           ALN + S+YAMGKV+M  S+F +G+G      N K +KVK++RN G GE+G FVLWQKRP
Sbjct: 116 ALNSVDSMYAMGKVRMAASEFCAGEGSL----NNKVLKVKNMRNGG-GEMGGFVLWQKRP 170

Query: 550 DLWCLELVLSGC 585
           DLWCLELV+SGC
Sbjct: 171 DLWCLELVVSGC 182


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